FFCP PHASE1:Hg19::chr19:50143452..50143468,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6237 | |EntrezGene=6237 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10447 | |HGNC=10447 | ||
|TSSclassifier=strong | |||
|UniProt=P10301 | |UniProt=P10301 | ||
|association_with_transcript=-52bp_to_ENST00000246792,NM_006270,uc002pop.1_5end | |association_with_transcript=-52bp_to_ENST00000246792,NM_006270,uc002pop.1_5end | ||
|cluster_id=chr19:50143452..50143468,- | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_2_at_RRAS_5end | |description=CAGE_peak_2_at_RRAS_5end | ||
|id=chr19:50143452..50143468,- | |id=chr19:50143452..50143468,- | ||
|ontology_enrichment_celltype=CL:0000055!1.71e-34!180;CL:0000222!4.75e-26!119;CL:0000183!2.71e-21!59;CL:0000057!3.83e-21!75;CL:0000680!1.07e-20!57;CL:0000056!1.07e-20!57;CL:0000355!1.07e-20!57;CL:0000187!3.77e-20!54;CL:0000192!3.54e-18!42;CL:0000514!3.54e-18!42;CL:0002371!4.09e-18!591;CL:0000144!2.20e-17!625;CL:0000220!1.47e-16!246;CL:0002321!9.14e-16!248;CL:0000393!9.68e-16!60;CL:0000211!9.68e-16!60;CL:0000359!2.56e-13!32;CL:0000548!6.86e-13!679;CL:0000004!6.86e-13!679;CL:0000255!6.86e-13!679;CL:0000012!3.68e-12!682;CL:0002620!1.39e-07!23;CL:0000213!2.35e-07!57;CL:0000215!2.35e-07!57;CL:0000048!8.39e-07!430;CL:0000723!8.48e-07!436 | |ontology_enrichment_celltype=CL:0000055!1.71e-34!180;CL:0000222!4.75e-26!119;CL:0000183!2.71e-21!59;CL:0000057!3.83e-21!75;CL:0000680!1.07e-20!57;CL:0000056!1.07e-20!57;CL:0000355!1.07e-20!57;CL:0000187!3.77e-20!54;CL:0000192!3.54e-18!42;CL:0000514!3.54e-18!42;CL:0002371!4.09e-18!591;CL:0000144!2.20e-17!625;CL:0000220!1.47e-16!246;CL:0002321!9.14e-16!248;CL:0000393!9.68e-16!60;CL:0000211!9.68e-16!60;CL:0000359!2.56e-13!32;CL:0000548!6.86e-13!679;CL:0000004!6.86e-13!679;CL:0000255!6.86e-13!679;CL:0000012!3.68e-12!682;CL:0002620!1.39e-07!23;CL:0000213!2.35e-07!57;CL:0000215!2.35e-07!57;CL:0000048!8.39e-07!430;CL:0000723!8.48e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000192;2.05e-15;43!CL:0000359;6.23e-14;32!CL:0000187;9.36e-13;55!CL:0000057;6.22e-10;73!CL:0000393;1.64e-09;61!CL:0000211;1.64e-09;61!CL:0000134;1.62e-08;55!CL:0002620;3.78e-08;23!CL:0000723;6.46e-08;61!CL:0002320;8.04e-08;188!CL:0000048;1.15e-07;58!CL:0002570;3.03e-07;8!CL:0002334;5.89e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.26e-29,121;CL:0000057,3.63e-24,76;CL:0000680,6.16e-24,58;CL:0000056,6.16e-24,58;CL:0000355,6.16e-24,58;CL:0000187,2.52e-23,55;CL:0000192,8.56e-21,43;CL:0000514,8.56e-21,43;CL:0000393,2.09e-18,61;CL:0000211,2.09e-18,61;CL:0002321,9.67e-17,250;CL:0000359,8.94e-15,32;CL:0000723,1.09e-11,433;CL:0000048,1.70e-11,427;CL:0000034,2.98e-10,441;CL:0002620,2.48e-08,23;CL:0000213,2.00e-07,58;CL:0000215,2.00e-07,58;CL:0002570,3.17e-07,8;CL:0000136,4.17e-07,15;CL:0002334,4.52e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;2.05e-15;43!CL:0000355;2.08e-12;58!CL:0000222;4.66e-08;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.39e-23!83;UBERON:0002329!2.39e-23!83;UBERON:0003077!2.39e-23!83;UBERON:0003059!2.39e-23!83;UBERON:0007282!2.39e-23!83;UBERON:0009618!2.39e-23!83;UBERON:0007285!2.39e-23!83;UBERON:0000486!6.50e-22!82;UBERON:0005256!1.56e-21!143;UBERON:0004290!3.07e-21!70;UBERON:0001134!5.17e-19!61;UBERON:0002036!5.17e-19!61;UBERON:0003082!5.17e-19!61;UBERON:0002049!1.32e-18!79;UBERON:0007798!1.32e-18!79;UBERON:0002385!2.41e-18!63;UBERON:0001015!2.41e-18!63;UBERON:0000383!2.41e-18!63;UBERON:0004872!7.91e-18!84;UBERON:0002100!2.49e-17!216;UBERON:0000055!1.65e-16!69;UBERON:0001981!2.13e-16!60;UBERON:0007500!2.13e-16!60;UBERON:0004537!2.13e-16!60;UBERON:0006965!2.13e-16!60;UBERON:0000490!2.13e-16!138;UBERON:0001637!9.21e-16!42;UBERON:0003509!9.21e-16!42;UBERON:0004572!9.21e-16!42;UBERON:0003914!1.86e-15!118;UBERON:0000475!2.47e-14!365;UBERON:0004573!9.80e-13!33;UBERON:0004571!9.80e-13!33;UBERON:0001009!1.26e-12!113;UBERON:0004535!1.44e-12!110;UBERON:0000119!1.67e-12!312;UBERON:0000483!4.93e-12!309;UBERON:0000468!1.43e-11!659;UBERON:0003102!1.59e-10!95;UBERON:0003104!2.86e-10!238;UBERON:0009142!2.86e-10!238;UBERON:0000467!1.07e-09!625;UBERON:0000926!1.26e-09!448;UBERON:0004120!1.26e-09!448;UBERON:0006603!1.26e-09!448;UBERON:0000480!1.90e-09!626;UBERON:0000481!7.26e-09!347;UBERON:0002199!1.07e-08!45;UBERON:0002416!1.07e-08!45;UBERON:0001013!2.02e-07!14;UBERON:0000947!2.63e-07!21;UBERON:0010191!2.63e-07!21;UBERON:0002097!9.98e-07!40 | |ontology_enrichment_uberon=UBERON:0000914!2.39e-23!83;UBERON:0002329!2.39e-23!83;UBERON:0003077!2.39e-23!83;UBERON:0003059!2.39e-23!83;UBERON:0007282!2.39e-23!83;UBERON:0009618!2.39e-23!83;UBERON:0007285!2.39e-23!83;UBERON:0000486!6.50e-22!82;UBERON:0005256!1.56e-21!143;UBERON:0004290!3.07e-21!70;UBERON:0001134!5.17e-19!61;UBERON:0002036!5.17e-19!61;UBERON:0003082!5.17e-19!61;UBERON:0002049!1.32e-18!79;UBERON:0007798!1.32e-18!79;UBERON:0002385!2.41e-18!63;UBERON:0001015!2.41e-18!63;UBERON:0000383!2.41e-18!63;UBERON:0004872!7.91e-18!84;UBERON:0002100!2.49e-17!216;UBERON:0000055!1.65e-16!69;UBERON:0001981!2.13e-16!60;UBERON:0007500!2.13e-16!60;UBERON:0004537!2.13e-16!60;UBERON:0006965!2.13e-16!60;UBERON:0000490!2.13e-16!138;UBERON:0001637!9.21e-16!42;UBERON:0003509!9.21e-16!42;UBERON:0004572!9.21e-16!42;UBERON:0003914!1.86e-15!118;UBERON:0000475!2.47e-14!365;UBERON:0004573!9.80e-13!33;UBERON:0004571!9.80e-13!33;UBERON:0001009!1.26e-12!113;UBERON:0004535!1.44e-12!110;UBERON:0000119!1.67e-12!312;UBERON:0000483!4.93e-12!309;UBERON:0000468!1.43e-11!659;UBERON:0003102!1.59e-10!95;UBERON:0003104!2.86e-10!238;UBERON:0009142!2.86e-10!238;UBERON:0000467!1.07e-09!625;UBERON:0000926!1.26e-09!448;UBERON:0004120!1.26e-09!448;UBERON:0006603!1.26e-09!448;UBERON:0000480!1.90e-09!626;UBERON:0000481!7.26e-09!347;UBERON:0002199!1.07e-08!45;UBERON:0002416!1.07e-08!45;UBERON:0001013!2.02e-07!14;UBERON:0000947!2.63e-07!21;UBERON:0010191!2.63e-07!21;UBERON:0002097!9.98e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.23e-13;33!UBERON:0004571;7.23e-13;33!UBERON:0001637;9.78e-13;42!UBERON:0003509;9.78e-13;42!UBERON:0004572;9.78e-13;42!UBERON:0007500;1.34e-10;56!UBERON:0001981;1.34e-10;56!UBERON:0004537;1.34e-10;56!UBERON:0000055;1.78e-08;65!UBERON:0003914;2.43e-08;74!UBERON:0001013;3.66e-08;14!UBERON:0000947;4.90e-08;21!UBERON:0010191;4.90e-08;21!UBERON:0002384;7.68e-08;198!UBERON:0002049;9.03e-08;75!UBERON:0007798;9.03e-08;75!UBERON:0003102;5.70e-07;50!UBERON:0002199;6.61e-07;46!UBERON:0002416;6.61e-07;46!UBERON:0002385;6.68e-07;31!UBERON:0001015;6.68e-07;31!UBERON:0000383;6.68e-07;31 | |||
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| ||
|short_description=p2@RRAS | |short_description=p2@RRAS | ||
}} | }} |
Latest revision as of 08:25, 19 September 2015
Short description: | p2@RRAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RRAS_5end |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | -52bp_to_ENST00000246792, NM_006270, uc002pop.1_5end |
EntrezGene: | RRAS |
HGNC: | 10447 |
UniProt: | P10301 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.26e-29 | 121 |
fibroblast | 3.63e-24 | 76 |
muscle precursor cell | 6.16e-24 | 58 |
myoblast | 6.16e-24 | 58 |
multi-potent skeletal muscle stem cell | 6.16e-24 | 58 |
muscle cell | 2.52e-23 | 55 |
smooth muscle cell | 8.56e-21 | 43 |
smooth muscle myoblast | 8.56e-21 | 43 |
electrically responsive cell | 2.09e-18 | 61 |
electrically active cell | 2.09e-18 | 61 |
embryonic cell | 9.67e-17 | 250 |
vascular associated smooth muscle cell | 8.94e-15 | 32 |
somatic stem cell | 1.09e-11 | 433 |
multi fate stem cell | 1.70e-11 | 427 |
stem cell | 2.98e-10 | 441 |
skin fibroblast | 2.48e-08 | 23 |
lining cell | 2.00e-07 | 58 |
barrier cell | 2.00e-07 | 58 |
mesenchymal stem cell of adipose | 3.17e-07 | 8 |
fat cell | 4.17e-07 | 15 |
preadipocyte | 4.52e-07 | 12 |