FFCP PHASE1:Hg19::chr1:11863635..11863646,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4524 | |EntrezGene=4524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7436 | |HGNC=7436 | ||
|TSSclassifier=strong | |||
|UniProt=P42898 | |UniProt=P42898 | ||
|association_with_transcript=-64bp_to_ENST00000376583_5end | |association_with_transcript=-64bp_to_ENST00000376583_5end | ||
|cluster_id=chr1:11863635..11863646,- | |||
|description=CAGE_peak_6_at_MTHFR_5end | |description=CAGE_peak_6_at_MTHFR_5end | ||
|id=chr1:11863635..11863646,- | |id=chr1:11863635..11863646,- | ||
|ontology_enrichment_celltype=CL:0000557!1.39e-08!71;CL:0002009!2.77e-07!65;CL:0000839!6.63e-07!70 | |ontology_enrichment_celltype=CL:0000557!1.39e-08!71;CL:0002009!2.77e-07!65;CL:0000839!6.63e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:1000497;5.74e-08;17!CL:0002518;5.74e-08;17!CL:1000507;5.86e-08;10!CL:1000494;5.86e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,4.36e-09,67;CL:1000497,1.81e-08,17;CL:0002518,1.81e-08,17;CL:1000507,2.17e-08,10;CL:1000494,2.17e-08,10;CL:0000763,3.70e-08,108;CL:0000049,3.70e-08,108;CL:0002009,2.70e-07,61;CL:0000839,8.38e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.18e-12!216;UBERON:0002204!9.41e-08!167;UBERON:0002371!4.77e-07!80;UBERON:0002405!8.87e-07!115;UBERON:0002193!8.93e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.86e-08;10!UBERON:0009773;5.86e-08;10!UBERON:0001231;5.86e-08;10!UBERON:0004810;5.86e-08;10!UBERON:0006554;1.40e-07;30!UBERON:0001008;1.40e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.51e-09,203;UBERON:0004810,2.17e-08,10;UBERON:0000926,8.10e-08,315;UBERON:0004120,8.10e-08,315;UBERON:0006603,8.10e-08,315;UBERON:0003103,1.57e-07,68;UBERON:0006555,2.67e-07,16;UBERON:0004819,2.67e-07,16;UBERON:0002204,3.17e-07,167;UBERON:0002371,4.14e-07,76;UBERON:0002405,9.26e-07,93 | |||
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| ||
|short_description=p6@MTHFR | |short_description=p6@MTHFR | ||
}} | }} |
Latest revision as of 10:57, 16 September 2015
Short description: | p6@MTHFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MTHFR_5end |
Coexpression cluster: | NA |
Association with transcript: | -64bp_to_ENST00000376583_5end |
EntrezGene: | MTHFR |
HGNC: | 7436 |
UniProt: | P42898 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 4.36e-09 | 67 |
kidney cell | 1.81e-08 | 17 |
kidney epithelial cell | 1.81e-08 | 17 |
kidney tubule cell | 2.17e-08 | 10 |
nephron tubule epithelial cell | 2.17e-08 | 10 |
myeloid cell | 3.70e-08 | 108 |
common myeloid progenitor | 3.70e-08 | 108 |
macrophage dendritic cell progenitor | 2.70e-07 | 61 |
myeloid lineage restricted progenitor cell | 8.38e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.51e-09 | 203 |
nephron tubule epithelium | 2.17e-08 | 10 |
mesoderm | 8.10e-08 | 315 |
mesoderm-derived structure | 8.10e-08 | 315 |
presumptive mesoderm | 8.10e-08 | 315 |
compound organ | 1.57e-07 | 68 |
excretory tube | 2.67e-07 | 16 |
kidney epithelium | 2.67e-07 | 16 |
musculoskeletal system | 3.17e-07 | 167 |
bone marrow | 4.14e-07 | 76 |
immune system | 9.26e-07 | 93 |