FFCP PHASE1:Hg19::chr3:98275166..98275178,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:98275166..98275178,- | |||
|coexpression_cluster_id=C1931 | |||
|description=CAGE_peak_at_chr3:98275166..98275178,- | |description=CAGE_peak_at_chr3:98275166..98275178,- | ||
|id=chr3:98275166..98275178,- | |id=chr3:98275166..98275178,- | ||
|ontology_enrichment_celltype=CL:0000988!2.92e-09!182;CL:0002032!5.83e-08!165;CL:0000837!5.83e-08!165;CL:0000037!2.06e-07!172;CL:0000566!2.06e-07!172;CL:0000945!5.28e-07!24;CL:0000826!5.28e-07!24;CL:0002087!7.91e-07!119;CL:0000838!9.68e-07!52 | |ontology_enrichment_celltype=CL:0000988!2.92e-09!182;CL:0002032!5.83e-08!165;CL:0000837!5.83e-08!165;CL:0000037!2.06e-07!172;CL:0000566!2.06e-07!172;CL:0000945!5.28e-07!24;CL:0000826!5.28e-07!24;CL:0002087!7.91e-07!119;CL:0000838!9.68e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.28e-14;1!CL:0000911;3.28e-14;1!CL:0000814;3.28e-14;1!CL:0000946;1.33e-13;1!CL:0000786;1.33e-13;1!CL:0000945;1.79e-08;24!CL:0002097;1.93e-07;2!CL:1000415;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.50e-14,1;CL:0000914,3.50e-14,1;CL:0000911,3.50e-14,1;CL:0000814,3.50e-14,1;CL:0002042,3.50e-14,1;CL:0002039,3.50e-14,1;CL:0002040,3.50e-14,1;CL:0002041,3.50e-14,1;CL:0000946,1.42e-13,1;CL:0000786,1.42e-13,1;CL:0000980,1.42e-13,1;CL:0000945,1.86e-08,24;CL:0000826,1.86e-08,24;CL:0000838,2.94e-08,52;CL:0000542,4.27e-08,53;CL:0000051,4.27e-08,53;CL:0000893,9.87e-08,2;CL:0002489,9.87e-08,2;CL:0000809,9.87e-08,2;CL:0000808,9.87e-08,2;CL:0000894,9.87e-08,2;CL:0000806,9.87e-08,2;CL:0000807,9.87e-08,2;CL:0000805,9.87e-08,2;CL:0002425,9.87e-08,2;CL:0002097,1.64e-07,2;CL:1000415,1.75e-07,2;CL:0000785,1.99e-07,2;CL:0000955,1.99e-07,2;CL:0000818,1.99e-07,2;CL:0000954,1.99e-07,2;CL:0000816,1.99e-07,2;CL:0000988,4.91e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002425;9.55e-08;2!CL:0000954;1.93e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!5.04e-08!51;DOID:0060083!5.04e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:630;1.33e-13;1!DOID:0050177;1.33e-13;1!DOID:0060060;1.33e-13;1!DOID:0060061;1.33e-13;1!DOID:0050427;1.33e-13;1!DOID:8691;1.33e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,8.58e-14,1;DOID:0060061,8.58e-14,1;DOID:8691,8.58e-14,1;DOID:630,1.25e-13,1;DOID:0050177,1.25e-13,1;DOID:0050427,1.25e-13,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;3.28e-14;1!UBERON:0009842;3.28e-14;1!UBERON:0003704;3.28e-14;1!UBERON:0001171;3.28e-14;1!UBERON:0001172;3.28e-14;1!UBERON:0002331;7.40e-12;10!UBERON:0002294;4.12e-08;7!UBERON:0001173;4.12e-08;7!UBERON:0000178;4.38e-08;15!UBERON:0000179;4.38e-08;15!UBERON:0000463;4.38e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,3.08e-14,1;UBERON:0009842,3.08e-14,1;UBERON:0003704,3.08e-14,1;UBERON:0001171,3.08e-14,1;UBERON:0001172,3.08e-14,1;UBERON:0002331,8.42e-12,10;UBERON:0000358,8.42e-12,10;UBERON:0000307,8.42e-12,10;UBERON:0000091,8.42e-12,10;UBERON:0000087,8.42e-12,10;UBERON:0007010,8.42e-12,10;UBERON:0007806,8.42e-12,10;UBERON:0008780,8.42e-12,10;UBERON:0005728,8.42e-12,10;UBERON:0004177,3.21e-08,7;UBERON:0005057,3.21e-08,7;UBERON:0000178,4.77e-08,15;UBERON:0000179,4.77e-08,15;UBERON:0000463,4.77e-08,15 | |||
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| ||
|short_description=p@chr3:98275166..98275178,- | |short_description=p@chr3:98275166..98275178,- | ||
}} | }} |
Latest revision as of 00:02, 30 July 2015
Short description: | p@chr3:98275166..98275178, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:98275166..98275178, - |
Coexpression cluster: | C1931_cholangiocellular_NK_cord_gall_glioma_CD4_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 3.08e-14 | 1 |
acinus | 3.08e-14 | 1 |
intrahepatic bile duct | 3.08e-14 | 1 |
portal lobule | 3.08e-14 | 1 |
hepatic acinus | 3.08e-14 | 1 |
umbilical cord | 8.42e-12 | 10 |
blastocyst | 8.42e-12 | 10 |
blastula | 8.42e-12 | 10 |
bilaminar disc | 8.42e-12 | 10 |
inner cell mass | 8.42e-12 | 10 |
cleaving embryo | 8.42e-12 | 10 |
connecting stalk | 8.42e-12 | 10 |
inner cell mass derived epiblast | 8.42e-12 | 10 |
extraembryonic mesoderm | 8.42e-12 | 10 |
hemopoietic organ | 3.21e-08 | 7 |
immune organ | 3.21e-08 | 7 |
blood | 4.77e-08 | 15 |
haemolymphatic fluid | 4.77e-08 | 15 |
organism substance | 4.77e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 8.58e-14 | 1 |
cutaneous T cell lymphoma | 8.58e-14 | 1 |
mycosis fungoides | 8.58e-14 | 1 |
genetic disease | 1.25e-13 | 1 |
monogenic disease | 1.25e-13 | 1 |
xeroderma pigmentosum | 1.25e-13 | 1 |