FFCP PHASE1:Hg19::chr4:177116772..177116779,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=132851 | |EntrezGene=132851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17333 | |HGNC=17333 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NEY3 | |UniProt=Q8NEY3 | ||
|association_with_transcript=42bp_to_ENST00000280191,NM_144644,uc003iuo.1_5end | |association_with_transcript=42bp_to_ENST00000280191,NM_144644,uc003iuo.1_5end | ||
|cluster_id=chr4:177116772..177116779,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_SPATA4_5end | |description=CAGE_peak_2_at_SPATA4_5end | ||
|id=chr4:177116772..177116779,- | |id=chr4:177116772..177116779,- | ||
|ontology_enrichment_celltype=CL:0000946!6.91e-10!1;CL:0000786!6.91e-10!1;CL:0000980!6.91e-10!1 | |ontology_enrichment_celltype=CL:0000946!6.91e-10!1;CL:0000786!6.91e-10!1;CL:0000980!6.91e-10!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.38e-16!115;UBERON:0001049!4.04e-16!57;UBERON:0005068!4.04e-16!57;UBERON:0006241!4.04e-16!57;UBERON:0007135!4.04e-16!57;UBERON:0002240!8.34e-13!3;UBERON:0006331!1.68e-12!3;UBERON:0001017!1.37e-10!82;UBERON:0002298!2.80e-10!8;UBERON:0002616!3.10e-10!59;UBERON:0003075!3.64e-10!86;UBERON:0007284!3.64e-10!86;UBERON:0003112!4.44e-10!1;UBERON:0000032!4.44e-10!1;UBERON:0005253!4.44e-10!1;UBERON:0003128!4.44e-10!1;UBERON:0002241!4.44e-10!1;UBERON:0001703!4.44e-10!1;UBERON:0004761!4.44e-10!1;UBERON:0009617!4.44e-10!1;UBERON:0002038!4.85e-10!1;UBERON:0009661!4.85e-10!1;UBERON:0005743!4.97e-10!86;UBERON:0007190!8.99e-10!1;UBERON:0002336!9.82e-10!1;UBERON:0001018!9.82e-10!1;UBERON:0002473!9.82e-10!1;UBERON:0005340!9.82e-10!1;UBERON:0002316!9.82e-10!1;UBERON:0003544!9.82e-10!1;UBERON:0001020!9.82e-10!1;UBERON:0005970!9.82e-10!1;UBERON:0002437!9.82e-10!1;UBERON:0002022!1.17e-09!1;UBERON:0002346!1.22e-09!90;UBERON:0003076!1.59e-09!15;UBERON:0003057!1.59e-09!15;UBERON:0002308!3.22e-09!9;UBERON:0000125!3.22e-09!9;UBERON:0002780!3.26e-09!41;UBERON:0001890!3.26e-09!41;UBERON:0006240!3.26e-09!41;UBERON:0003080!5.56e-09!42;UBERON:0000073!6.16e-09!94;UBERON:0001016!6.16e-09!94;UBERON:0000955!1.87e-08!69;UBERON:0006238!1.87e-08!69;UBERON:0001893!2.83e-08!34;UBERON:0005174!4.95e-08!5;UBERON:0001137!4.95e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p2@SPATA4 | |short_description=p2@SPATA4 | ||
}} | }} |
Latest revision as of 22:13, 16 September 2015
Short description: | p2@SPATA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPATA4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 42bp_to_ENST00000280191, NM_144644, uc003iuo.1_5end |
EntrezGene: | SPATA4 |
HGNC: | 17333 |
UniProt: | Q8NEY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |