FFCP PHASE1:Hg19::chr4:87770202..87770211,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=345274 | |EntrezGene=345274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30603 | |HGNC=30603 | ||
|TSSclassifier=strong | |||
|UniProt=Q3KNW5 | |UniProt=Q3KNW5 | ||
|association_with_transcript=56bp_to_AJ583502,BC107051,BC107052_5end | |association_with_transcript=56bp_to_AJ583502,BC107051,BC107052_5end | ||
|cluster_id=chr4:87770202..87770211,- | |||
|description=CAGE_peak_5_at_SLC10A6_5end | |description=CAGE_peak_5_at_SLC10A6_5end | ||
|id=chr4:87770202..87770211,- | |id=chr4:87770202..87770211,- | ||
|ontology_enrichment_celltype=CL:0002159!1.28e-15!13;CL:0000622!2.68e-11!5;CL:0000362!4.69e-11!8;CL:0000154!2.06e-09!6;CL:0000317!6.56e-08!2;CL:1000448!6.56e-08!2;CL:0002308!6.56e-08!2;CL:0002140!6.56e-08!2;CL:0000312!3.58e-07!5;CL:0002077!9.63e-07!33 | |ontology_enrichment_celltype=CL:0002159!1.28e-15!13;CL:0000622!2.68e-11!5;CL:0000362!4.69e-11!8;CL:0000154!2.06e-09!6;CL:0000317!6.56e-08!2;CL:1000448!6.56e-08!2;CL:0002308!6.56e-08!2;CL:0002140!6.56e-08!2;CL:0000312!3.58e-07!5;CL:0002077!9.63e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000312;3.73e-45;5!CL:0000240;8.62e-38;6!CL:0000311;8.62e-38;6!CL:0000079;8.62e-38;6!CL:0000237;8.62e-38;6!CL:0000362;1.70e-25;9!CL:0002159;1.11e-16;14!CL:0001014;6.85e-14;2!CL:0001016;6.85e-14;2!CL:0002621;1.53e-09;3!CL:0002077;2.31e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,2.98e-45,5;CL:0000240,7.14e-38,6;CL:0000311,7.14e-38,6;CL:0000079,7.14e-38,6;CL:0000237,7.14e-38,6;CL:0000036,7.14e-38,6;CL:0000357,7.14e-38,6;CL:0000114,7.14e-38,6;CL:0000362,1.50e-25,9;CL:0002159,1.02e-16,14;CL:0001014,7.30e-14,2;CL:0001016,7.30e-14,2;CL:0002621,1.30e-09,3;CL:0002077,2.83e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;8.62e-38;6!CL:0000114;8.62e-38;6!UBERON:0009143;7.62e-26;1!UBERON:0008814;1.21e-13;2!UBERON:0010056;1.21e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.38e-14!115;UBERON:0000166!4.08e-09!21;UBERON:0002419!6.56e-08!2;UBERON:0007771!6.56e-08!2;UBERON:0003297!6.56e-08!2;UBERON:0001821!6.56e-08!2;UBERON:0003487!6.56e-08!2;UBERON:0001820!6.56e-08!2;UBERON:0005089!6.56e-08!2;UBERON:0005088!6.56e-08!2;UBERON:0000161!1.52e-07!35;UBERON:0003102!4.06e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.27e-15;15!UBERON:0007376;1.27e-15;15!UBERON:0010371;3.95e-13;31!UBERON:0001043;1.53e-09;3!UBERON:0001723;1.53e-09;3!UBERON:0001949;1.53e-09;3!UBERON:0001033;1.53e-09;3!UBERON:0002199;9.82e-07;46!UBERON:0002416;9.82e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.18e-15,15;UBERON:0007376,1.18e-15,15;UBERON:0007383,1.18e-15,15;UBERON:0001949,1.30e-09,3;UBERON:0001723,1.54e-09,3;UBERON:0001033,1.54e-09,3;UBERON:0010056,1.54e-09,3;UBERON:0001043,1.81e-09,3;UBERON:0009143,1.81e-09,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,0,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53650399572076,3.37205259772859,2.41269533787914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.769502585037971,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0,0.17472666824203,0,0,0,0,1.26085721434945,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,3.0952078182318,0,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0.544017803369474,0.7520696820681,0.306345576763462,0.655745261419609,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.12729431655633,0,1.52401723527873,0.342233301085281,0.336760265072938,0.286888821570705,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p5@SLC10A6 | |short_description=p5@SLC10A6 | ||
}} | }} |
Latest revision as of 04:26, 19 September 2015
Short description: | p5@SLC10A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC10A6_5end |
Coexpression cluster: | NA |
Association with transcript: | 56bp_to_AJ583502, BC107051, BC107052_5end |
EntrezGene: | SLC10A6 |
HGNC: | 30603 |
UniProt: | Q3KNW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 2.98e-45 | 5 |
stratified squamous epithelial cell | 7.14e-38 | 6 |
keratin accumulating cell | 7.14e-38 | 6 |
stratified epithelial cell | 7.14e-38 | 6 |
keratinizing barrier epithelial cell | 7.14e-38 | 6 |
epithelial fate stem cell | 7.14e-38 | 6 |
stratified epithelial stem cell | 7.14e-38 | 6 |
surface ectodermal cell | 7.14e-38 | 6 |
epidermal cell | 1.50e-25 | 9 |
general ecto-epithelial cell | 1.02e-16 | 14 |
CD1a-positive Langerhans cell | 7.30e-14 | 2 |
immature CD1a-positive Langerhans cell | 7.30e-14 | 2 |
gingival epithelial cell | 1.30e-09 | 3 |
ecto-epithelial cell | 2.83e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.18e-15 | 15 |
outer epithelium | 1.18e-15 | 15 |
enveloping layer of ectoderm | 1.18e-15 | 15 |
gingival epithelium | 1.30e-09 | 3 |
tongue | 1.54e-09 | 3 |
gustatory system | 1.54e-09 | 3 |
future tongue | 1.54e-09 | 3 |
esophagus | 1.81e-09 | 3 |
esophageal region | 1.81e-09 | 3 |