FFCP PHASE1:Hg19::chr5:147618131..147618142,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000513133_5end | |association_with_transcript=0bp_to_ENST00000513133_5end | ||
|cluster_id=chr5:147618131..147618142,+ | |||
|coexpression_cluster_id=C1583 | |||
|description=CAGE_peak_4_at_ENST00000513133_5end | |description=CAGE_peak_4_at_ENST00000513133_5end | ||
|id=chr5:147618131..147618142,+ | |id=chr5:147618131..147618142,+ | ||
|ontology_enrichment_celltype=CL:0002150!1.58e-21!3;CL:0000861!1.58e-21!3;CL:0000235!7.95e-07!10 | |ontology_enrichment_celltype=CL:0002150!1.58e-21!3;CL:0000861!1.58e-21!3;CL:0000235!7.95e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:1000415;1.20e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.20e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.72e-38;29 | |||
|ontology_enrichment_disease=DOID:305!1.98e-16!106;DOID:0050687!6.67e-13!143;DOID:14566!1.13e-11!239;DOID:162!8.94e-11!235;DOID:4362!7.49e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:4362;2.12e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.88e-15,106;DOID:4362,2.25e-12,5;DOID:0050687,7.65e-11,143;DOID:162,1.82e-10,235;DOID:14566,3.21e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.20e-64!9;UBERON:0001557!6.15e-30!19;UBERON:0008947!1.33e-17!38;UBERON:0003258!1.33e-17!38;UBERON:0000072!3.00e-14!46;UBERON:0000065!3.82e-12!53;UBERON:0000002!2.15e-11!6;UBERON:0001560!2.15e-11!6;UBERON:0001004!1.69e-08!72;UBERON:0006834!3.28e-08!1;UBERON:0001041!4.54e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.00e-125;9!UBERON:0001557;3.00e-125;9!UBERON:0000072;6.39e-28;37!UBERON:0000065;1.36e-23;44!UBERON:0001004;2.13e-12;65!UBERON:0000002;1.73e-10;6!UBERON:0001560;1.73e-10;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.02e-125,9;UBERON:0001557,5.20e-59,19;UBERON:0008947,3.49e-29,38;UBERON:0003258,3.49e-29,38;UBERON:0000072,1.87e-23,47;UBERON:0000065,2.58e-20,54;UBERON:0001004,1.33e-14,74;UBERON:0001041,2.73e-12,87;UBERON:0000002,1.81e-10,6;UBERON:0001560,1.81e-10,6;UBERON:0004921,9.74e-09,118;UBERON:0001007,1.13e-08,145;UBERON:0001555,1.13e-08,145;UBERON:0007026,1.13e-08,145;UBERON:0001048,8.17e-08,160;UBERON:0004119,9.29e-08,160;UBERON:0000925,9.29e-08,160;UBERON:0006595,9.29e-08,160 | |||
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|short_description=p4@ENST00000513133 | |short_description=p4@ENST00000513133 | ||
}} | }} |
Latest revision as of 11:17, 30 July 2015
Short description: | p4@ENST00000513133 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000513133_5end |
Coexpression cluster: | C1583_gall_Hep2_lung_cervical_mesothelioma_glassy_amniotic |
Association with transcript: | 0bp_to_ENST00000513133_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.20e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.02e-125 | 9 |
upper respiratory tract | 5.20e-59 | 19 |
respiratory primordium | 3.49e-29 | 38 |
endoderm of foregut | 3.49e-29 | 38 |
segment of respiratory tract | 1.87e-23 | 47 |
respiratory tract | 2.58e-20 | 54 |
respiratory system | 1.33e-14 | 74 |
foregut | 2.73e-12 | 87 |
uterine cervix | 1.81e-10 | 6 |
neck of organ | 1.81e-10 | 6 |
subdivision of digestive tract | 9.74e-09 | 118 |
digestive system | 1.13e-08 | 145 |
digestive tract | 1.13e-08 | 145 |
primitive gut | 1.13e-08 | 145 |
primordium | 8.17e-08 | 160 |
endoderm-derived structure | 9.29e-08 | 160 |
endoderm | 9.29e-08 | 160 |
presumptive endoderm | 9.29e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.88e-15 | 106 |
cervical cancer | 2.25e-12 | 5 |
cell type cancer | 7.65e-11 | 143 |
cancer | 1.82e-10 | 235 |
disease of cellular proliferation | 3.21e-10 | 239 |