FFCP PHASE1:Hg19::chr1:31205338..31205351,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7805 | |EntrezGene=7805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29612 | |HGNC=29612 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=61bp_to_AF401210_5end | |association_with_transcript=61bp_to_AF401210_5end | ||
|cluster_id=chr1:31205338..31205351,- | |||
|coexpression_cluster_id=C532 | |||
|description=CAGE_peak_5_at_LAPTM5_5end | |description=CAGE_peak_5_at_LAPTM5_5end | ||
|id=chr1:31205338..31205351,- | |id=chr1:31205338..31205351,- | ||
|ontology_enrichment_celltype=CL:0000738!4.08e-77!140;CL:0000037!6.30e-73!172;CL:0000566!6.30e-73!172;CL:0002032!2.87e-70!165;CL:0000837!2.87e-70!165;CL:0002087!4.44e-68!119;CL:0002031!9.21e-68!124;CL:0000988!6.05e-67!182;CL:0000766!4.75e-52!76;CL:0000557!2.63e-45!71;CL:0000839!1.55e-44!70;CL:0000763!3.76e-44!112;CL:0000049!3.76e-44!112;CL:0002057!5.10e-43!42;CL:0002194!4.77e-41!63;CL:0000576!4.77e-41!63;CL:0000040!4.77e-41!63;CL:0000559!4.77e-41!63;CL:0002009!6.85e-41!65;CL:0000860!3.84e-39!45;CL:0000542!5.63e-22!53;CL:0000051!5.63e-22!53;CL:0000838!2.48e-21!52;CL:0000134!6.54e-18!358;CL:0002320!5.88e-17!365;CL:0000219!4.00e-14!390;CL:0000945!7.95e-13!24;CL:0000826!7.95e-13!24;CL:0000048!3.17e-10!430;CL:0000723!1.09e-09!436;CL:0000034!5.25e-09!444;CL:0000084!2.48e-07!25;CL:0000827!2.48e-07!25;CL:0002274!7.57e-07!5;CL:0000457!7.57e-07!5;CL:0002191!7.57e-07!5;CL:0000097!7.57e-07!5;CL:0000831!7.57e-07!5;CL:0002028!7.57e-07!5 | |ontology_enrichment_celltype=CL:0000738!4.08e-77!140;CL:0000037!6.30e-73!172;CL:0000566!6.30e-73!172;CL:0002032!2.87e-70!165;CL:0000837!2.87e-70!165;CL:0002087!4.44e-68!119;CL:0002031!9.21e-68!124;CL:0000988!6.05e-67!182;CL:0000766!4.75e-52!76;CL:0000557!2.63e-45!71;CL:0000839!1.55e-44!70;CL:0000763!3.76e-44!112;CL:0000049!3.76e-44!112;CL:0002057!5.10e-43!42;CL:0002194!4.77e-41!63;CL:0000576!4.77e-41!63;CL:0000040!4.77e-41!63;CL:0000559!4.77e-41!63;CL:0002009!6.85e-41!65;CL:0000860!3.84e-39!45;CL:0000542!5.63e-22!53;CL:0000051!5.63e-22!53;CL:0000838!2.48e-21!52;CL:0000134!6.54e-18!358;CL:0002320!5.88e-17!365;CL:0000219!4.00e-14!390;CL:0000945!7.95e-13!24;CL:0000826!7.95e-13!24;CL:0000048!3.17e-10!430;CL:0000723!1.09e-09!436;CL:0000034!5.25e-09!444;CL:0000084!2.48e-07!25;CL:0000827!2.48e-07!25;CL:0002274!7.57e-07!5;CL:0000457!7.57e-07!5;CL:0002191!7.57e-07!5;CL:0000097!7.57e-07!5;CL:0000831!7.57e-07!5;CL:0002028!7.57e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.60e-66;33!CL:0002057;8.60e-66;33!CL:0000473;3.61e-54;39!CL:0000234;3.61e-54;39!CL:0000576;1.07e-41;48!CL:0000766;8.48e-35;69!CL:0002087;4.11e-16;104!CL:0000738;3.85e-15;136!CL:0000775;4.79e-14;3!CL:0000763;6.20e-14;100!CL:0000094;2.47e-13;8!CL:0000623;3.06e-12;3!CL:0000081;1.33e-09;11!CL:0000988;3.60e-09;177!CL:0000236;9.53e-08;13!CL:0002393;8.14e-07;6!CL:0002397;8.14e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.39e-69,42;CL:0002057,9.39e-69,42;CL:0000473,9.86e-69,48;CL:0000234,9.86e-69,48;CL:0000766,1.65e-68,72;CL:0002194,2.26e-57,59;CL:0000576,2.26e-57,59;CL:0000040,2.26e-57,59;CL:0000559,2.26e-57,59;CL:0000738,7.97e-57,136;CL:0002009,2.79e-55,61;CL:0000839,1.92e-54,66;CL:0000557,1.57e-53,67;CL:0002087,6.46e-50,115;CL:0002031,1.20e-47,120;CL:0002032,2.62e-44,161;CL:0000837,2.62e-44,161;CL:0000037,2.75e-44,168;CL:0000763,4.38e-43,108;CL:0000049,4.38e-43,108;CL:0000988,1.43e-41,177;CL:0000134,4.55e-16,354;CL:0002320,1.43e-15,361;CL:0000775,4.32e-14,3;CL:0000219,8.19e-14,386;CL:0000094,2.05e-13,8;CL:0000623,2.67e-12,3;CL:0000825,2.67e-12,3;CL:0000048,1.16e-11,427;CL:0000723,2.30e-11,433;CL:0000034,5.56e-11,441;CL:0000081,1.16e-09,11;CL:0000236,3.00e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;2.83e-54;42!CL:0000049;6.22e-12;108 | |||
|ontology_enrichment_disease=DOID:2531!1.04e-08!51;DOID:0060083!1.04e-08!51;DOID:0060058!9.34e-08!10 | |ontology_enrichment_disease=DOID:2531!1.04e-08!51;DOID:0060083!1.04e-08!51;DOID:0060058!9.34e-08!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.95e-46!102;UBERON:0003061!9.95e-46!102;UBERON:0002193!1.50e-43!112;UBERON:0002371!1.94e-39!80;UBERON:0001474!2.55e-35!86;UBERON:0002405!3.66e-30!115;UBERON:0004765!3.17e-27!101;UBERON:0001434!3.17e-27!101;UBERON:0002384!1.15e-15!375;UBERON:0003081!3.99e-14!216;UBERON:0002204!3.29e-10!167 | |ontology_enrichment_uberon=UBERON:0002390!9.95e-46!102;UBERON:0003061!9.95e-46!102;UBERON:0002193!1.50e-43!112;UBERON:0002371!1.94e-39!80;UBERON:0001474!2.55e-35!86;UBERON:0002405!3.66e-30!115;UBERON:0004765!3.17e-27!101;UBERON:0001434!3.17e-27!101;UBERON:0002384!1.15e-15!375;UBERON:0003081!3.99e-14!216;UBERON:0002204!3.29e-10!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.23e-46,76;UBERON:0001474,1.79e-42,82;UBERON:0002390,4.34e-42,98;UBERON:0003061,4.34e-42,98;UBERON:0004765,4.57e-38,90;UBERON:0002193,1.77e-37,108;UBERON:0002405,1.31e-36,93;UBERON:0001434,1.53e-33,100;UBERON:0003081,1.75e-17,203;UBERON:0002204,3.80e-17,167;UBERON:0002384,6.87e-15,371;UBERON:0000926,2.00e-08,315;UBERON:0004120,2.00e-08,315;UBERON:0006603,2.00e-08,315 | |||
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|short_description=p5@LAPTM5 | |short_description=p5@LAPTM5 | ||
}} | }} |
Latest revision as of 11:57, 17 September 2015
Short description: | p5@LAPTM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LAPTM5_5end |
Coexpression cluster: | C532_Mast_CD14_Eosinophils_seminal_ductus_Neutrophils_Smooth |
Association with transcript: | 61bp_to_AF401210_5end |
EntrezGene: | LAPTM5 |
HGNC: | 29612 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.23e-46 | 76 |
bone element | 1.79e-42 | 82 |
hematopoietic system | 4.34e-42 | 98 |
blood island | 4.34e-42 | 98 |
skeletal element | 4.57e-38 | 90 |
hemolymphoid system | 1.77e-37 | 108 |
immune system | 1.31e-36 | 93 |
skeletal system | 1.53e-33 | 100 |
lateral plate mesoderm | 1.75e-17 | 203 |
musculoskeletal system | 3.80e-17 | 167 |
connective tissue | 6.87e-15 | 371 |
mesoderm | 2.00e-08 | 315 |
mesoderm-derived structure | 2.00e-08 | 315 |
presumptive mesoderm | 2.00e-08 | 315 |