FFCP PHASE1:Hg19::chr1:35247081..35247102,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2707 | |EntrezGene=2707 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4285 | |HGNC=4285 | ||
|TSSclassifier=strong | |||
|UniProt=O75712 | |UniProt=O75712 | ||
|association_with_transcript=291bp_to_ENST00000373366,NM_024009,uc001bxx.2_5end | |association_with_transcript=291bp_to_ENST00000373366,NM_024009,uc001bxx.2_5end | ||
|cluster_id=chr1:35247081..35247102,+ | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_6_at_GJB3_5end | |description=CAGE_peak_6_at_GJB3_5end | ||
|id=chr1:35247081..35247102,+ | |id=chr1:35247081..35247102,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.58e-38!254;CL:0002076!1.15e-28!43;CL:0000223!5.51e-22!59;CL:0002251!1.11e-15!21;CL:0002368!1.39e-15!13;CL:0002159!1.86e-10!13;CL:0002202!2.48e-10!9;CL:0002632!2.48e-10!9;CL:0000622!8.37e-08!5;CL:0000244!3.32e-07!4;CL:0000731!3.32e-07!4 | |ontology_enrichment_celltype=CL:0000066!7.58e-38!254;CL:0002076!1.15e-28!43;CL:0000223!5.51e-22!59;CL:0002251!1.11e-15!21;CL:0002368!1.39e-15!13;CL:0002159!1.86e-10!13;CL:0002202!2.48e-10!9;CL:0002632!2.48e-10!9;CL:0000622!8.37e-08!5;CL:0000244!3.32e-07!4;CL:0000731!3.32e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.57e-24;42!CL:0002368;1.87e-22;13!CL:0002251;7.85e-18;20!CL:0002159;3.14e-16;14!CL:0002202;1.22e-13;9!CL:0002632;1.22e-13;9!CL:0000622;2.57e-12;5!CL:0000244;2.93e-11;4!CL:0000731;2.93e-11;4!CL:0000154;3.39e-10;6!CL:0002328;5.21e-09;3!CL:0000307;7.68e-09;3!CL:0000349;1.94e-08;19!CL:0002621;3.47e-08;3!CL:0002623;5.86e-08;3!CL:0002577;7.11e-08;3!CL:0002166;1.77e-07;3!CL:0000240;2.40e-07;6!CL:0000311;2.40e-07;6!CL:0000079;2.40e-07;6!CL:0000237;2.40e-07;6!CL:0002077;3.54e-07;34!CL:0000362;4.48e-07;9!CL:0002327;5.53e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.10e-35,253;CL:0002076,6.66e-34,42;CL:0000223,2.04e-24,58;CL:0002368,1.62e-22,13;CL:0002251,9.70e-18,20;CL:0002159,2.82e-16,14;CL:0002202,1.06e-13,9;CL:0002632,1.06e-13,9;CL:0000622,2.87e-12,5;CL:0000244,3.01e-11,4;CL:0000731,3.01e-11,4;CL:0000154,3.71e-10,6;CL:0002328,4.95e-09,3;CL:0000068,7.89e-09,3;CL:0000069,7.89e-09,3;CL:0000307,7.89e-09,3;CL:0000377,7.89e-09,3;CL:0000349,1.85e-08,19;CL:0000076,3.16e-08,63;CL:0002077,3.48e-08,34;CL:0002621,4.03e-08,3;CL:0002623,5.94e-08,3;CL:0002577,7.56e-08,3;CL:0002166,1.47e-07,3;CL:0000240,2.26e-07,6;CL:0000311,2.26e-07,6;CL:0000079,2.26e-07,6;CL:0000237,2.26e-07,6;CL:0000036,2.26e-07,6;CL:0000357,2.26e-07,6;CL:0000114,2.26e-07,6;CL:0000362,4.52e-07,9;CL:0002327,5.48e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;7.98e-14;58!CL:0000377;7.68e-09;3!CL:0000357;2.40e-07;6!CL:0000114;2.40e-07;6 | |||
|ontology_enrichment_disease=DOID:305!7.85e-20!106;DOID:1749!1.48e-14!14;DOID:0050687!2.03e-11!143 | |ontology_enrichment_disease=DOID:305!7.85e-20!106;DOID:1749!1.48e-14!14;DOID:0050687!2.03e-11!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.14e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.83e-15,14;DOID:305,4.67e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.65e-29!169;UBERON:0000925!5.65e-29!169;UBERON:0006595!5.65e-29!169;UBERON:0001004!9.76e-21!72;UBERON:0001007!6.63e-20!155;UBERON:0001555!6.63e-20!155;UBERON:0007026!6.63e-20!155;UBERON:0000065!1.09e-17!53;UBERON:0000077!3.49e-17!130;UBERON:0004921!2.81e-15!129;UBERON:0004185!2.81e-15!129;UBERON:0000072!4.41e-14!46;UBERON:0008947!6.28e-13!38;UBERON:0003258!6.28e-13!38;UBERON:0001041!2.12e-12!98;UBERON:0005631!3.09e-12!14;UBERON:0000158!3.09e-12!14;UBERON:0000064!6.96e-12!219;UBERON:0001737!4.79e-10!9;UBERON:0005911!6.68e-10!82;UBERON:0001557!7.24e-10!19;UBERON:0000161!2.47e-09!35;UBERON:0003124!6.02e-09!7;UBERON:0000365!2.23e-08!5;UBERON:0005153!6.88e-08!37;UBERON:0000344!1.00e-07!12;UBERON:0000062!1.45e-07!511;UBERON:0007196!2.09e-07!14;UBERON:0001558!2.09e-07!14;UBERON:0000166!2.86e-07!21;UBERON:0003729!4.56e-07!5;UBERON:0005178!5.14e-07!34;UBERON:0002224!5.14e-07!34;UBERON:0006554!6.29e-07!44;UBERON:0005910!7.68e-07!6;UBERON:0000464!7.96e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.42e-13;5!UBERON:0000486;1.39e-12;12!UBERON:0005910;6.48e-11;6!UBERON:0000065;2.76e-10;44!UBERON:0007196;9.67e-10;15!UBERON:0001558;9.67e-10;15!UBERON:0005911;1.07e-09;36!UBERON:0004807;2.65e-09;22!UBERON:0001004;3.75e-09;65!UBERON:0004815;5.21e-09;3!UBERON:0002031;5.21e-09;3!UBERON:0005178;5.42e-09;34!UBERON:0002224;5.42e-09;34!UBERON:0000161;8.11e-09;19!UBERON:0000166;8.11e-09;19!UBERON:0000305;2.48e-08;7!UBERON:0005181;2.48e-08;35!UBERON:0000344;2.95e-08;20!UBERON:0000165;3.37e-08;28!UBERON:0001949;3.47e-08;3!UBERON:0000072;3.85e-08;37!UBERON:0005631;7.17e-08;10!UBERON:0000158;7.17e-08;10!UBERON:0001041;1.57e-07;14!UBERON:0001911;5.53e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.19e-21,160;UBERON:0000925,4.19e-21,160;UBERON:0006595,4.19e-21,160;UBERON:0001004,3.68e-18,74;UBERON:0000065,2.90e-14,54;UBERON:0000365,2.99e-13,5;UBERON:0005631,4.21e-12,14;UBERON:0000158,4.21e-12,14;UBERON:0001007,1.20e-11,145;UBERON:0001555,1.20e-11,145;UBERON:0007026,1.20e-11,145;UBERON:0001041,1.64e-11,87;UBERON:0005910,5.80e-11,6;UBERON:0004921,6.49e-11,118;UBERON:0000072,2.06e-10,47;UBERON:0003102,6.99e-10,99;UBERON:0007196,9.92e-10,15;UBERON:0001558,9.92e-10,15;UBERON:0005178,1.89e-09,34;UBERON:0002224,1.89e-09,34;UBERON:0008947,3.89e-09,38;UBERON:0003258,3.89e-09,38;UBERON:0005181,4.30e-09,35;UBERON:0000166,4.95e-09,22;UBERON:0004815,4.95e-09,3;UBERON:0002031,4.95e-09,3;UBERON:0000161,1.75e-08,36;UBERON:0000305,2.32e-08,7;UBERON:0000344,3.11e-08,20;UBERON:0001949,4.03e-08,3;UBERON:0000165,7.57e-08,29;UBERON:0000930,7.57e-08,29;UBERON:0005157,1.75e-07,47;UBERON:0005153,2.23e-07,37;UBERON:0004871,2.88e-07,8;UBERON:0000033,3.18e-07,56;UBERON:0004923,3.21e-07,66;UBERON:0001911,5.48e-07,4;UBERON:0005333,5.48e-07,4;UBERON:0008425,5.48e-07,4;UBERON:0005311,5.48e-07,4;UBERON:0004807,6.95e-07,28 | |||
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|short_description=p6@GJB3 | |short_description=p6@GJB3 | ||
}} | }} |
Latest revision as of 17:51, 17 September 2015
Short description: | p6@GJB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GJB3_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 291bp_to_ENST00000373366, NM_024009, uc001bxx.2_5end |
EntrezGene: | GJB3 |
HGNC: | 4285 |
UniProt: | O75712 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.83e-15 | 14 |
carcinoma | 4.67e-07 | 106 |