FFCP PHASE1:Hg19::chr6:123958068..123958110,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10345 | |EntrezGene=10345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12261 | |HGNC=12261 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDT2 | |UniProt=E9PDT2 | ||
|association_with_transcript=0bp_to_ENST00000265491_5end | |association_with_transcript=0bp_to_ENST00000265491_5end | ||
|cluster_id=chr6:123958068..123958110,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_TRDN_5end | |description=CAGE_peak_1_at_TRDN_5end | ||
|id=chr6:123958068..123958110,- | |id=chr6:123958068..123958110,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.08e-10;3!UBERON:0003057;3.08e-10;3!UBERON:0006601;5.93e-09;82!UBERON:0005062;6.94e-09;4!UBERON:0007284;6.94e-09;4!UBERON:0006603;3.80e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.03e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.03e-08,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007100;1.65e-12;25!UBERON:0004151;9.09e-12;3!UBERON:0003978;1.01e-11;3!UBERON:0000946;1.01e-11;3!UBERON:0002240;3.08e-10;3!UBERON:0005174;3.08e-10;3!UBERON:0001137;3.08e-10;3!UBERON:0007023;2.51e-09;114!UBERON:0005090;1.11e-08;2!UBERON:0001630;1.11e-08;2!UBERON:0000341;1.97e-08;2!UBERON:0002081;2.63e-08;2!UBERON:0002133;2.72e-08;2!UBERON:0003296;5.44e-08;4!UBERON:0010133;5.44e-08;4!UBERON:0003127;5.80e-08;2!UBERON:0000007;1.06e-07;2!UBERON:0001829;1.48e-07;2!UBERON:0000948;4.38e-07;22 | |||
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| ||
|short_description=p1@TRDN | |short_description=p1@TRDN | ||
}} | }} |
Latest revision as of 06:17, 20 September 2015
Short description: | p1@TRDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRDN_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000265491_5end |
EntrezGene: | TRDN |
HGNC: | 12261 |
UniProt: | E9PDT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.59e-34 | 114 |
compound organ | 2.33e-12 | 68 |
cardiac chamber | 9.09e-12 | 3 |
valve | 1.01e-11 | 3 |
cardiac mesenchyme | 1.01e-11 | 3 |
cardial valve | 1.01e-11 | 3 |
tunica intima | 1.01e-11 | 3 |
heart layer | 1.01e-11 | 3 |
endocardium | 1.01e-11 | 3 |
endocardial cushion | 1.01e-11 | 3 |
presumptive endocardium | 1.01e-11 | 3 |
primary circulatory organ | 2.02e-11 | 27 |
spinal cord | 3.40e-10 | 3 |
dorsal region element | 3.40e-10 | 3 |
dorsum | 3.40e-10 | 3 |
structure with developmental contribution from neural crest | 1.45e-09 | 132 |
muscle structure | 1.11e-08 | 2 |
muscle organ | 1.11e-08 | 2 |
throat | 1.97e-08 | 2 |
cardiac atrium | 2.63e-08 | 2 |
future cardiac atrium | 2.63e-08 | 2 |
atrioventricular valve | 2.72e-08 | 2 |
gland of diencephalon | 5.18e-08 | 4 |
neuroendocrine gland | 5.18e-08 | 4 |
open tracheal system trachea | 5.90e-08 | 2 |
pituitary gland | 9.88e-08 | 2 |
major salivary gland | 1.53e-07 | 2 |
posterior neural tube | 4.09e-07 | 15 |
chordal neural plate | 4.09e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.03e-08 | 2 |