FFCP PHASE1:Hg19::chr6:22569784..22569797,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=154150 | |EntrezGene=154150 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21095 | |HGNC=21095 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000510882_5end | |association_with_transcript=0bp_to_ENST00000510882_5end | ||
|cluster_id=chr6:22569784..22569797,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_HDGFL1_5end | |description=CAGE_peak_1_at_HDGFL1_5end | ||
|id=chr6:22569784..22569797,+ | |id=chr6:22569784..22569797,+ | ||
|ontology_enrichment_celltype=CL:0000039!8.36e-24!7;CL:0000586!8.36e-24!7 | |ontology_enrichment_celltype=CL:0000039!8.36e-24!7;CL:0000586!8.36e-24!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.35e-08;7!CL:0000586;2.35e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.35e-08,7;CL:0000586,2.35e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.85e-45;10!UBERON:0005564;4.85e-45;10 | |||
|ontology_enrichment_disease=DOID:3095!5.14e-08!22;DOID:2994!5.14e-08!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!7.81e-59!11;UBERON:0000473!1.61e-56!8;UBERON:0003101!8.40e-40!22;UBERON:0000079!8.40e-40!22;UBERON:0000991!1.03e-21!21;UBERON:0009196!1.03e-21!21;UBERON:0009117!1.03e-21!21;UBERON:0005564!1.03e-21!21;UBERON:0004176!9.76e-21!22;UBERON:0001301!2.71e-19!1;UBERON:0005156!1.01e-14!59;UBERON:0000990!1.01e-14!59;UBERON:0003133!1.72e-13!48;UBERON:0003886!3.03e-10!63;UBERON:0002323!5.60e-10!46;UBERON:0004458!2.27e-09!49;UBERON:0002553!3.34e-09!70;UBERON:0006947!2.63e-07!3;UBERON:0004054!2.63e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.52e-56;8!UBERON:0003135;4.67e-41;11!UBERON:0000991;4.76e-22;21!UBERON:0003101;4.27e-21;22!UBERON:0000079;4.27e-21;22!UBERON:0002323;8.09e-08;45!UBERON:0003133;5.11e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.52e-56,8;UBERON:0003135,4.67e-41,11;UBERON:0000991,4.76e-22,21;UBERON:0009196,4.76e-22,21;UBERON:0009117,4.76e-22,21;UBERON:0005564,4.76e-22,21;UBERON:0004176,4.27e-21,22;UBERON:0003101,4.27e-21,22;UBERON:0000079,4.27e-21,22;UBERON:0002323,1.35e-10,46;UBERON:0003133,3.42e-10,48;UBERON:0004458,5.30e-10,49;UBERON:0003886,3.71e-09,54;UBERON:0005156,1.88e-08,59;UBERON:0000990,1.88e-08,59;UBERON:0002553,3.34e-08,61 | |||
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|short_description=p1@HDGFL1 | |short_description=p1@HDGFL1 | ||
}} | }} |
Latest revision as of 05:12, 17 September 2015
Short description: | p1@HDGFL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HDGFL1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000510882_5end |
EntrezGene: | HDGFL1 |
HGNC: | 21095 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.35e-08 | 7 |
germ cell | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.52e-56 | 8 |
male reproductive organ | 4.67e-41 | 11 |
gonad | 4.76e-22 | 21 |
indifferent external genitalia | 4.76e-22 | 21 |
indifferent gonad | 4.76e-22 | 21 |
gonad primordium | 4.76e-22 | 21 |
external genitalia | 4.27e-21 | 22 |
male organism | 4.27e-21 | 22 |
male reproductive system | 4.27e-21 | 22 |
body cavity | 1.35e-10 | 46 |
reproductive organ | 3.42e-10 | 48 |
body cavity or lining | 5.30e-10 | 49 |
body cavity precursor | 3.71e-09 | 54 |
reproductive structure | 1.88e-08 | 59 |
reproductive system | 1.88e-08 | 59 |
anatomical cavity | 3.34e-08 | 61 |