FFCP PHASE1:Hg19::chr13:36502019..36502026,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:36502019..36502026,+
|short_description=p@chr13:36502019..36502026,+
|description=CAGE_peak_at_chr13:36502019..36502026,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:36502019..36502026,+ | |||
|description=CAGE_peak_at_chr13:36502019..36502026,+ | |||
|id=chr13:36502019..36502026,+ | |||
|ontology_enrichment_celltype=CL:0000569!5.33e-10!4;CL:0000011!5.33e-10!4;CL:0000064!1.55e-07!3;CL:0005012!1.55e-07!3;CL:0000067!1.55e-07!3;CL:0002304!1.55e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002539;5.40e-17;10!CL:0000359;3.33e-09;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,5.86e-17,10;CL:0000359,2.30e-09,32;CL:0000192,4.88e-07,43;CL:0000514,4.88e-07,43 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.31e-08;10 | |||
|ontology_enrichment_disease=DOID:0060084!6.63e-09!3;DOID:127!6.63e-09!3;DOID:2394!1.36e-07!14;DOID:0060072!9.75e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.58e-25;3!DOID:127;4.58e-25;3!DOID:0060072;4.49e-19;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.31e-25,3;DOID:127,4.31e-25,3;DOID:0060072,4.29e-19,4 | |||
|ontology_enrichment_uberon=UBERON:0001778!1.55e-07!3;UBERON:0001775!1.55e-07!3;UBERON:0004573!2.86e-07!33;UBERON:0004571!2.86e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;5.40e-17;10!UBERON:0004695;5.40e-17;10!UBERON:0002111;5.40e-17;10!UBERON:0004178;5.40e-17;10!UBERON:0000947;3.33e-14;21!UBERON:0010191;3.33e-14;21!UBERON:0004573;1.32e-12;33!UBERON:0004571;1.32e-12;33!UBERON:0001135;1.50e-11;15!UBERON:0001905;2.85e-10;2!UBERON:0002757;2.85e-10;2!UBERON:0010134;2.85e-10;2!UBERON:0005408;2.85e-10;2!UBERON:0001899;2.85e-10;2!UBERON:0001637;3.27e-08;42!UBERON:0003509;3.27e-08;42!UBERON:0004572;3.27e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,5.86e-17,10;UBERON:0004695,5.86e-17,10;UBERON:0002111,5.86e-17,10;UBERON:0004178,5.86e-17,10;UBERON:0000947,3.39e-14,21;UBERON:0010191,3.39e-14,21;UBERON:0004573,8.55e-14,33;UBERON:0004571,8.55e-14,33;UBERON:0001135,1.58e-11,15;UBERON:0001637,7.37e-11,42;UBERON:0003509,7.37e-11,42;UBERON:0004572,7.37e-11,42;UBERON:0001905,3.58e-10,2;UBERON:0002757,3.58e-10,2;UBERON:0010134,3.58e-10,2;UBERON:0005408,3.58e-10,2;UBERON:0001899,3.58e-10,2;UBERON:0007500,9.68e-08,59;UBERON:0001981,9.68e-08,59;UBERON:0004537,9.68e-08,59;UBERON:0006965,9.68e-08,59 | |||
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| ||
|short_description=p@chr13:36502019..36502026,+ | |||
}} | }} |
Latest revision as of 15:47, 24 July 2015
Short description: | p@chr13:36502019..36502026, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:36502019..36502026, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 5.86e-17 | 10 |
vascular associated smooth muscle cell | 2.30e-09 | 32 |
smooth muscle cell | 4.88e-07 | 43 |
smooth muscle myoblast | 4.88e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 5.86e-17 | 10 |
arterial system smooth muscle | 5.86e-17 | 10 |
artery smooth muscle tissue | 5.86e-17 | 10 |
aorta smooth muscle tissue | 5.86e-17 | 10 |
aorta | 3.39e-14 | 21 |
aortic system | 3.39e-14 | 21 |
systemic artery | 8.55e-14 | 33 |
systemic arterial system | 8.55e-14 | 33 |
smooth muscle tissue | 1.58e-11 | 15 |
artery | 7.37e-11 | 42 |
arterial blood vessel | 7.37e-11 | 42 |
arterial system | 7.37e-11 | 42 |
pineal body | 3.58e-10 | 2 |
regional part of epithalamus | 3.58e-10 | 2 |
secretory circumventricular organ | 3.58e-10 | 2 |
circumventricular organ | 3.58e-10 | 2 |
epithalamus | 3.58e-10 | 2 |
epithelial tube open at both ends | 9.68e-08 | 59 |
blood vessel | 9.68e-08 | 59 |
blood vasculature | 9.68e-08 | 59 |
vascular cord | 9.68e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.31e-25 | 3 |
leiomyoma | 4.31e-25 | 3 |
benign neoplasm | 4.29e-19 | 4 |