FFCP PHASE1:Hg19::chr21:11124114..11124128,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:11124114..11124128,+ | |||
|coexpression_cluster_id=C390 | |||
|description=CAGE_peak_at_chr21:11124114..11124128,+ | |description=CAGE_peak_at_chr21:11124114..11124128,+ | ||
|id=chr21:11124114..11124128,+ | |id=chr21:11124114..11124128,+ | ||
|ontology_enrichment_celltype=CL:0002274!9.46e-11!5;CL:0000457!9.46e-11!5;CL:0002191!9.46e-11!5;CL:0000097!9.46e-11!5;CL:0000831!9.46e-11!5;CL:0002028!9.46e-11!5;CL:0000047!1.23e-07!8 | |ontology_enrichment_celltype=CL:0002274!9.46e-11!5;CL:0000457!9.46e-11!5;CL:0002191!9.46e-11!5;CL:0000097!9.46e-11!5;CL:0000831!9.46e-11!5;CL:0002028!9.46e-11!5;CL:0000047!1.23e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.41e-23;2!CL:0000153;1.09e-11;9!CL:0000447;1.09e-11;9!CL:0000540;1.34e-08;6!CL:0000404;1.34e-08;6!CL:0000138;2.86e-08;6!CL:0000327;3.22e-07;15!CL:0002319;5.71e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.06e-23,8;CL:0000153,1.26e-11,9;CL:0000447,1.26e-11,9;CL:0000540,1.34e-08,6;CL:0000031,1.34e-08,6;CL:0000404,1.34e-08,6;CL:0000058,3.25e-08,6;CL:0000138,3.25e-08,6;CL:0000327,3.50e-07,15;CL:0002319,5.71e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.18e-12;1!UBERON:0005425;1.75e-12;1!UBERON:0004874;3.26e-12;1!CL:0000031;1.34e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!6.27e-08!3;UBERON:0009751!6.27e-08!3;UBERON:0000946!6.27e-08!3;UBERON:0002523!6.27e-08!3;UBERON:0005983!6.27e-08!3;UBERON:0002165!6.27e-08!3;UBERON:0002062!6.27e-08!3;UBERON:0007280!6.27e-08!3 | |ontology_enrichment_uberon=UBERON:0003978!6.27e-08!3;UBERON:0009751!6.27e-08!3;UBERON:0000946!6.27e-08!3;UBERON:0002523!6.27e-08!3;UBERON:0005983!6.27e-08!3;UBERON:0002165!6.27e-08!3;UBERON:0002062!6.27e-08!3;UBERON:0007280!6.27e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002146;9.92e-13;1!UBERON:0005623;9.92e-13;1!UBERON:0000941;1.75e-12;1!UBERON:0001785;1.75e-12;1!UBERON:0002464;1.75e-12;1!UBERON:0004904;1.75e-12;1!UBERON:0001021;1.75e-12;1!UBERON:0000989;3.26e-12;1!UBERON:0008811;3.26e-12;1!UBERON:0003714;7.19e-07;2!UBERON:0005162;7.19e-07;2!UBERON:0000122;7.19e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,9.92e-13,1;UBERON:0005623,9.92e-13,1;UBERON:0000941,1.57e-12,1;UBERON:0001785,1.57e-12,1;UBERON:0002464,1.57e-12,1;UBERON:0004904,1.57e-12,1;UBERON:0001021,1.57e-12,1;UBERON:0003902,1.57e-12,1;UBERON:0005425,1.57e-12,1;UBERON:0000989,2.46e-12,1;UBERON:0008811,2.46e-12,1;UBERON:0006258,2.46e-12,1;UBERON:0005876,2.46e-12,1;UBERON:0004874,2.46e-12,1;UBERON:0003714,6.80e-07,2;UBERON:0005162,6.80e-07,2;UBERON:0000122,6.80e-07,2 | |||
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| ||
|short_description=p@chr21:11124114..11124128,+ | |short_description=p@chr21:11124114..11124128,+ | ||
}} | }} |
Latest revision as of 16:41, 28 July 2015
Short description: | p@chr21:11124114..11124128, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:11124114..11124128, + |
Coexpression cluster: | C390_Neurons_Synoviocyte_optic_Neural_heart_umbilical_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.06e-23 | 8 |
GAG secreting cell | 1.26e-11 | 9 |
carbohydrate secreting cell | 1.26e-11 | 9 |
neuron | 1.34e-08 | 6 |
neuroblast | 1.34e-08 | 6 |
electrically signaling cell | 1.34e-08 | 6 |
chondroblast | 3.25e-08 | 6 |
chondrocyte | 3.25e-08 | 6 |
extracellular matrix secreting cell | 3.50e-07 | 15 |
neural cell | 5.71e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 9.92e-13 | 1 |
semi-lunar valve | 9.92e-13 | 1 |
cranial nerve II | 1.57e-12 | 1 |
cranial nerve | 1.57e-12 | 1 |
nerve trunk | 1.57e-12 | 1 |
nerve connecting eye with brain | 1.57e-12 | 1 |
nerve | 1.57e-12 | 1 |
retinal neural layer | 1.57e-12 | 1 |
presumptive neural retina | 1.57e-12 | 1 |
penis | 2.46e-12 | 1 |
intromittent organ | 2.46e-12 | 1 |
lateral plate mesenchyme | 2.46e-12 | 1 |
undifferentiated genital tubercle | 2.46e-12 | 1 |
somatopleure | 2.46e-12 | 1 |
neural tissue | 6.80e-07 | 2 |
multi cell component structure | 6.80e-07 | 2 |
neuron projection bundle | 6.80e-07 | 2 |