FFCP PHASE1:Hg19::chr6:80543084..80543091,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:80543084..80543091,- | |||
|coexpression_cluster_id=C369 | |||
|description=CAGE_peak_at_chr6:80543084..80543091,- | |description=CAGE_peak_at_chr6:80543084..80543091,- | ||
|id=chr6:80543084..80543091,- | |id=chr6:80543084..80543091,- | ||
|ontology_enrichment_celltype=CL:0000064!1.17e-21!3;CL:0005012!1.17e-21!3;CL:0000067!1.17e-21!3;CL:0002304!1.17e-21!3;CL:0002574!4.72e-08!1 | |ontology_enrichment_celltype=CL:0000064!1.17e-21!3;CL:0005012!1.17e-21!3;CL:0000067!1.17e-21!3;CL:0002304!1.17e-21!3;CL:0002574!4.72e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.21e-13;2!CL:0000242;1.21e-13;2!CL:0000064;1.19e-09;3!CL:0000067;1.19e-09;3!CL:0005012;1.19e-09;3!CL:0002304;1.19e-09;3!CL:0000306;1.31e-07;4!CL:0002222;1.31e-07;4!CL:0002224;1.31e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.21e-13,2;CL:0000064,1.19e-09,3;CL:0000067,1.19e-09,3;CL:0005012,1.19e-09,3;CL:0002304,1.19e-09,3;CL:0000306,1.31e-07,4;CL:0002222,1.31e-07,4;CL:0002224,1.31e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004140;7.62e-26;1 | |||
|ontology_enrichment_disease=DOID:171!9.83e-18!10;DOID:3095!6.30e-15!22;DOID:2994!6.30e-15!22;DOID:169!2.83e-11!6 | |||
|ontology_enrichment_disease_v019=DOID:171;6.28e-11;10!DOID:5409;1.80e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.61e-11,10;DOID:5409,1.69e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001778!1.17e-21!3;UBERON:0001775!1.17e-21!3;UBERON:0000488!2.14e-16!4;UBERON:0000013!1.99e-13!5;UBERON:0002410!1.99e-13!5;UBERON:0002346!4.54e-12!90;UBERON:0002203!4.14e-11!6;UBERON:0001768!4.14e-11!6;UBERON:0007625!1.56e-10!11;UBERON:0003056!2.41e-09!61;UBERON:0000924!3.35e-09!173;UBERON:0006601!3.35e-09!173;UBERON:0003075!4.51e-09!86;UBERON:0007284!4.51e-09!86;UBERON:0001801!2.68e-08!14;UBERON:0002902!3.33e-08!1;UBERON:0009899!3.33e-08!1;UBERON:0007190!6.24e-08!1;UBERON:0002581!6.68e-08!1;UBERON:0001950!7.96e-08!20;UBERON:0000010!1.14e-07!8;UBERON:0004121!3.93e-07!169;UBERON:0002619!3.97e-07!22;UBERON:0001869!8.31e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;4.22e-10;11!UBERON:0001778;1.19e-09;3!UBERON:0001775;1.19e-09;3!UBERON:0010371;3.73e-08;31!UBERON:0001801;3.90e-08;14!UBERON:0010077;1.31e-07;4!UBERON:0005389;1.31e-07;4!UBERON:0000484;1.31e-07;4!UBERON:0000965;1.31e-07;4!UBERON:0001803;1.31e-07;4!UBERON:0002346;1.40e-07;4!UBERON:0000923;1.40e-07;4!UBERON:0010316;1.40e-07;4!UBERON:0005291;1.40e-07;4!UBERON:0000488;1.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,4.22e-10,11;UBERON:0001778,1.19e-09,3;UBERON:0001775,1.19e-09,3;UBERON:0001801,3.90e-08,14;UBERON:0010077,1.31e-07,4;UBERON:0005389,1.31e-07,4;UBERON:0000484,1.31e-07,4;UBERON:0002546,1.31e-07,4;UBERON:0000965,1.31e-07,4;UBERON:0001803,1.31e-07,4;UBERON:0003073,1.31e-07,4;UBERON:0005426,1.31e-07,4;UBERON:0000488,1.49e-07,4 | |||
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|short_description=p@chr6:80543084..80543091,- | |short_description=p@chr6:80543084..80543091,- | ||
}} | }} |
Latest revision as of 03:25, 31 July 2015
Short description: | p@chr6:80543084..80543091, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:80543084..80543091, - |
Coexpression cluster: | C369_Lens_eye_Ciliary_retina_H9_Retinal_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.21e-13 | 2 |
ciliated cell | 1.19e-09 | 3 |
ciliated epithelial cell | 1.19e-09 | 3 |
multi-ciliated epithelial cell | 1.19e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.19e-09 | 3 |
crystallin accumulating cell | 1.31e-07 | 4 |
vertebrate lens cell | 1.31e-07 | 4 |
lens epithelial cell | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 4.22e-10 | 11 |
ciliary epithelium | 1.19e-09 | 3 |
ciliary body | 1.19e-09 | 3 |
anterior segment of eyeball | 3.90e-08 | 14 |
cuboidal epithelium | 1.31e-07 | 4 |
transparent eye structure | 1.31e-07 | 4 |
simple cuboidal epithelium | 1.31e-07 | 4 |
cranial placode | 1.31e-07 | 4 |
lens of camera-type eye | 1.31e-07 | 4 |
epithelium of lens | 1.31e-07 | 4 |
lens placode | 1.31e-07 | 4 |
lens vesicle | 1.31e-07 | 4 |
atypical epithelium | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.61e-11 | 10 |
lung small cell carcinoma | 1.69e-07 | 4 |