FFCP PHASE1:Hg19::chr13:50216386..50216401,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:50216386..50216401,+
|short_description=p@chr13:50216386..50216401,+
|description=CAGE_peak_at_chr13:50216386..50216401,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:50216386..50216401,+ | |||
|coexpression_cluster_id=C827 | |||
|description=CAGE_peak_at_chr13:50216386..50216401,+ | |||
|id=chr13:50216386..50216401,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.08e-86!42;CL:0000860!1.74e-84!45;CL:0002194!2.19e-82!63;CL:0000576!2.19e-82!63;CL:0000040!2.19e-82!63;CL:0000559!2.19e-82!63;CL:0002009!1.52e-79!65;CL:0000839!3.84e-73!70;CL:0000557!5.72e-72!71;CL:0000766!1.47e-66!76;CL:0000763!5.85e-44!112;CL:0000049!5.85e-44!112;CL:0002087!8.63e-43!119;CL:0002031!1.33e-38!124;CL:0000738!1.09e-34!140;CL:0002032!9.51e-28!165;CL:0000837!9.51e-28!165;CL:0000037!1.33e-27!172;CL:0000566!1.33e-27!172;CL:0000988!1.86e-25!182;CL:0000134!8.65e-11!358;CL:0002320!2.36e-10!365;CL:0000219!7.92e-09!390;CL:0000048!1.44e-07!430;CL:0000723!2.65e-07!436;CL:0000235!2.86e-07!10;CL:0000034!5.84e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.29e-129;33!CL:0002057;3.29e-129;33!CL:0000473;3.05e-99;39!CL:0000234;3.05e-99;39!CL:0000576;2.39e-62;48!CL:0000766;2.57e-32;69!CL:0000763;6.23e-22;100!CL:0002087;1.81e-15;104!CL:0000738;1.57e-11;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.06e-110,42;CL:0002057,2.06e-110,42;CL:0000473,3.30e-104,48;CL:0000234,3.30e-104,48;CL:0002194,1.20e-82,59;CL:0000576,1.20e-82,59;CL:0000040,1.20e-82,59;CL:0000559,1.20e-82,59;CL:0002009,7.31e-80,61;CL:0000839,1.25e-73,66;CL:0000557,1.71e-72,67;CL:0000766,2.81e-67,72;CL:0000763,7.99e-44,108;CL:0000049,7.99e-44,108;CL:0002087,5.97e-41,115;CL:0002031,4.22e-39,120;CL:0000738,4.36e-34,136;CL:0002032,3.15e-28,161;CL:0000837,3.15e-28,161;CL:0000037,6.74e-27,168;CL:0000988,2.44e-25,177;CL:0000134,1.13e-10,354;CL:0002320,2.20e-10,361;CL:0000219,2.28e-09,386;CL:0000048,4.01e-08,427;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.32e-85;42!CL:0000049;1.24e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.32e-66!80;UBERON:0001474!1.18e-60!86;UBERON:0002390!1.29e-59!102;UBERON:0003061!1.29e-59!102;UBERON:0002193!2.88e-53!112;UBERON:0004765!4.84e-50!101;UBERON:0001434!4.84e-50!101;UBERON:0002405!6.81e-47!115;UBERON:0002204!2.46e-27!167;UBERON:0003081!5.66e-22!216;UBERON:0002384!2.00e-10!375;UBERON:0000988!8.18e-09!3;UBERON:0000062!2.74e-07!511;UBERON:0000926!9.64e-07!448;UBERON:0004120!9.64e-07!448;UBERON:0006603!9.64e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.37e-63,76;UBERON:0001474,1.00e-58,82;UBERON:0004765,3.09e-53,90;UBERON:0002405,2.03e-51,93;UBERON:0002390,1.24e-48,98;UBERON:0003061,1.24e-48,98;UBERON:0001434,1.36e-47,100;UBERON:0002193,7.99e-44,108;UBERON:0002204,4.42e-27,167;UBERON:0003081,1.32e-21,203;UBERON:0000926,1.66e-12,315;UBERON:0004120,1.66e-12,315;UBERON:0006603,1.66e-12,315;UBERON:0002384,5.43e-10,371 | |||
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| ||
|short_description=p@chr13:50216386..50216401,+ | |||
}} | }} |
Latest revision as of 16:38, 24 July 2015
Short description: | p@chr13:50216386..50216401, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:50216386..50216401, + |
Coexpression cluster: | C827_CD14_throat_tongue_chorionic_esophagus_endometrioid_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.06e-110 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.06e-110 | 42 |
defensive cell | 3.30e-104 | 48 |
phagocyte | 3.30e-104 | 48 |
monopoietic cell | 1.20e-82 | 59 |
monocyte | 1.20e-82 | 59 |
monoblast | 1.20e-82 | 59 |
promonocyte | 1.20e-82 | 59 |
macrophage dendritic cell progenitor | 7.31e-80 | 61 |
myeloid lineage restricted progenitor cell | 1.25e-73 | 66 |
granulocyte monocyte progenitor cell | 1.71e-72 | 67 |
myeloid leukocyte | 2.81e-67 | 72 |
myeloid cell | 7.99e-44 | 108 |
common myeloid progenitor | 7.99e-44 | 108 |
nongranular leukocyte | 5.97e-41 | 115 |
hematopoietic lineage restricted progenitor cell | 4.22e-39 | 120 |
leukocyte | 4.36e-34 | 136 |
hematopoietic oligopotent progenitor cell | 3.15e-28 | 161 |
hematopoietic multipotent progenitor cell | 3.15e-28 | 161 |
hematopoietic stem cell | 6.74e-27 | 168 |
hematopoietic cell | 2.44e-25 | 177 |
mesenchymal cell | 1.13e-10 | 354 |
connective tissue cell | 2.20e-10 | 361 |
motile cell | 2.28e-09 | 386 |
multi fate stem cell | 4.01e-08 | 427 |
somatic stem cell | 5.96e-08 | 433 |
stem cell | 9.95e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.37e-63 | 76 |
bone element | 1.00e-58 | 82 |
skeletal element | 3.09e-53 | 90 |
immune system | 2.03e-51 | 93 |
hematopoietic system | 1.24e-48 | 98 |
blood island | 1.24e-48 | 98 |
skeletal system | 1.36e-47 | 100 |
hemolymphoid system | 7.99e-44 | 108 |
musculoskeletal system | 4.42e-27 | 167 |
lateral plate mesoderm | 1.32e-21 | 203 |
mesoderm | 1.66e-12 | 315 |
mesoderm-derived structure | 1.66e-12 | 315 |
presumptive mesoderm | 1.66e-12 | 315 |
connective tissue | 5.43e-10 | 371 |