FFCP PHASE1:Hg19::chr9:107545118..107545135,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:107545118..107545135,- | |||
|coexpression_cluster_id=C1924 | |||
|description=CAGE_peak_at_chr9:107545118..107545135,- | |description=CAGE_peak_at_chr9:107545118..107545135,- | ||
|id=chr9:107545118..107545135,- | |id=chr9:107545118..107545135,- | ||
|ontology_enrichment_celltype=CL:0002057!2.39e-14!42;CL:0000766!2.05e-13!76;CL:0000557!4.56e-13!71;CL:0002009!6.32e-13!65;CL:0002194!8.52e-13!63;CL:0000576!8.52e-13!63;CL:0000040!8.52e-13!63;CL:0000559!8.52e-13!63;CL:0000839!2.40e-12!70;CL:0000860!1.04e-11!45 | |ontology_enrichment_celltype=CL:0002057!2.39e-14!42;CL:0000766!2.05e-13!76;CL:0000557!4.56e-13!71;CL:0002009!6.32e-13!65;CL:0002194!8.52e-13!63;CL:0000576!8.52e-13!63;CL:0000040!8.52e-13!63;CL:0000559!8.52e-13!63;CL:0000839!2.40e-12!70;CL:0000860!1.04e-11!45 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.30e-16;39!CL:0000234;1.30e-16;39!CL:0000860;1.57e-16;33!CL:0002057;1.57e-16;33!CL:0000576;3.46e-09;48!CL:0000766;1.41e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.41e-17,48;CL:0000234,4.41e-17,48;CL:0000766,1.32e-14,72;CL:0000557,1.77e-14,67;CL:0002009,2.29e-14,61;CL:0002194,2.96e-14,59;CL:0000576,2.96e-14,59;CL:0000040,2.96e-14,59;CL:0000559,2.96e-14,59;CL:0000860,6.11e-14,42;CL:0002057,6.11e-14,42;CL:0000839,1.11e-13,66 | |||
|ontology_enrichment_development_v019=CL:0002057;3.74e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!1.91e-11!612;UBERON:0000468!6.40e-11!659;UBERON:0000923!2.51e-10!604;UBERON:0005291!2.51e-10!604;UBERON:0006598!2.51e-10!604;UBERON:0002532!2.51e-10!604;UBERON:0002050!3.38e-10!605;UBERON:0005423!3.38e-10!605;UBERON:0000467!4.20e-10!625;UBERON:0002405!4.21e-10!115;UBERON:0002371!5.97e-10!80;UBERON:0000480!6.46e-10!626;UBERON:0002204!1.85e-09!167;UBERON:0001474!1.92e-09!86;UBERON:0000062!3.60e-09!511;UBERON:0004765!1.99e-07!101;UBERON:0001434!1.99e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,9.47e-12,564;UBERON:0000923,1.11e-11,560;UBERON:0010316,1.11e-11,560;UBERON:0005291,1.11e-11,560;UBERON:0006598,1.11e-11,560;UBERON:0010317,1.11e-11,560;UBERON:0002532,1.11e-11,560;UBERON:0000922,1.33e-11,592;UBERON:0002371,4.21e-11,76;UBERON:0005423,7.97e-11,581;UBERON:0001474,2.84e-10,82;UBERON:0000926,1.06e-09,315;UBERON:0004120,1.06e-09,315;UBERON:0006603,1.06e-09,315;UBERON:0002204,1.87e-09,167;UBERON:0004765,2.89e-09,90;UBERON:0002405,4.30e-08,93;UBERON:0001434,1.61e-07,100 | |||
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| ||
|short_description=p@chr9:107545118..107545135,- | |short_description=p@chr9:107545118..107545135,- | ||
}} | }} |
Latest revision as of 21:21, 31 July 2015
Short description: | p@chr9:107545118..107545135, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:107545118..107545135, - |
Coexpression cluster: | C1924_CD14_mature_Hepatocyte_Mast_salivary_Smooth_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.41e-17 | 48 |
phagocyte | 4.41e-17 | 48 |
myeloid leukocyte | 1.32e-14 | 72 |
granulocyte monocyte progenitor cell | 1.77e-14 | 67 |
macrophage dendritic cell progenitor | 2.29e-14 | 61 |
monopoietic cell | 2.96e-14 | 59 |
monocyte | 2.96e-14 | 59 |
monoblast | 2.96e-14 | 59 |
promonocyte | 2.96e-14 | 59 |
classical monocyte | 6.11e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.11e-14 | 42 |
myeloid lineage restricted progenitor cell | 1.11e-13 | 66 |
Ontology term | p-value | n |
---|---|---|
embryonic structure | 9.47e-12 | 564 |
germ layer | 1.11e-11 | 560 |
germ layer / neural crest | 1.11e-11 | 560 |
embryonic tissue | 1.11e-11 | 560 |
presumptive structure | 1.11e-11 | 560 |
germ layer / neural crest derived structure | 1.11e-11 | 560 |
epiblast (generic) | 1.11e-11 | 560 |
embryo | 1.33e-11 | 592 |
bone marrow | 4.21e-11 | 76 |
developing anatomical structure | 7.97e-11 | 581 |
bone element | 2.84e-10 | 82 |
mesoderm | 1.06e-09 | 315 |
mesoderm-derived structure | 1.06e-09 | 315 |
presumptive mesoderm | 1.06e-09 | 315 |
musculoskeletal system | 1.87e-09 | 167 |
skeletal element | 2.89e-09 | 90 |
immune system | 4.30e-08 | 93 |
skeletal system | 1.61e-07 | 100 |