FFCP PHASE1:Hg19::chr9:124048864..124048892,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2934 | |EntrezGene=2934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4620 | |HGNC=4620 | ||
|TSSclassifier=strong | |||
|UniProt=F5H1A8 | |UniProt=F5H1A8 | ||
|association_with_transcript=0bp_to_ENST00000545652,uc011lyi.1_5end | |association_with_transcript=0bp_to_ENST00000545652,uc011lyi.1_5end | ||
|cluster_id=chr9:124048864..124048892,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_19_at_GSN_5end | |description=CAGE_peak_19_at_GSN_5end | ||
|id=chr9:124048864..124048892,+ | |id=chr9:124048864..124048892,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000840;6.22e-26;5!CL:0000990;2.99e-17;8!CL:0000451;4.38e-14;10!CL:0001014;6.46e-14;2!CL:0001016;6.46e-14;2!CL:0000235;8.79e-10;6!CL:0002567;3.84e-09;3!CL:0002581;1.79e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,4.94e-26,5;CL:0001029,4.94e-26,5;CL:0000990,2.57e-17,8;CL:0000451,3.88e-14,10;CL:0001014,7.14e-14,2;CL:0001016,7.14e-14,2;CL:0000235,1.47e-09,6;CL:0002567,3.39e-09,3;CL:0002581,1.39e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010226;4.27e-08;1!UBERON:0010227;5.22e-08;1!UBERON:0000358;6.57e-08;1!UBERON:0004140;6.57e-08;1!UBERON:0005062;1.77e-07;4!UBERON:0007284;1.77e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.44e-14;2!DOID:178;5.76e-08;1!DOID:326;5.76e-08;1!DOID:3978;5.76e-08;1!DOID:3394;5.76e-08;1!DOID:5844;5.76e-08;1!DOID:1287;1.37e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.37e-14,2;DOID:178,5.58e-08,1;DOID:326,5.58e-08,1;DOID:3978,5.58e-08,1;DOID:3394,5.58e-08,1;DOID:5844,5.58e-08,1;DOID:1287,1.35e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;8.99e-16;25!UBERON:0004151;6.74e-10;3!UBERON:0003978;1.06e-09;3!UBERON:0000946;1.06e-09;3!UBERON:0001723;2.23e-09;3!UBERON:0001033;2.23e-09;3!UBERON:0002084;4.27e-08;1!UBERON:0002082;4.27e-08;1!UBERON:0002079;5.22e-08;1!UBERON:0002135;5.76e-08;1!UBERON:0002146;7.75e-08;1!UBERON:0005623;7.75e-08;1!UBERON:0002426;1.79e-07;1!UBERON:0003831;1.79e-07;1!UBERON:0003898;1.79e-07;1!UBERON:0004830;1.79e-07;1!UBERON:0003830;1.79e-07;1!UBERON:0005175;1.79e-07;1!UBERON:0001774;1.79e-07;1!UBERON:0001103;1.79e-07;1!UBERON:0000948;2.66e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.62e-14,27;UBERON:0004151,6.75e-10,3;UBERON:0003978,1.04e-09,3;UBERON:0009751,1.04e-09,3;UBERON:0000946,1.04e-09,3;UBERON:0002523,1.04e-09,3;UBERON:0005983,1.04e-09,3;UBERON:0002165,1.04e-09,3;UBERON:0002062,1.04e-09,3;UBERON:0007280,1.04e-09,3;UBERON:0003103,1.44e-09,68;UBERON:0001723,1.53e-09,3;UBERON:0001033,1.53e-09,3;UBERON:0010056,1.53e-09,3;UBERON:0002084,4.28e-08,1;UBERON:0002082,4.28e-08,1;UBERON:0010226,4.28e-08,1;UBERON:0002079,5.22e-08,1;UBERON:0002135,5.96e-08,1;UBERON:0002146,7.26e-08,1;UBERON:0005623,7.26e-08,1;UBERON:0002426,1.22e-07,1;UBERON:0003831,1.22e-07,1;UBERON:0003898,1.22e-07,1;UBERON:0004830,1.22e-07,1;UBERON:0003830,1.22e-07,1;UBERON:0005175,1.22e-07,1;UBERON:0001774,1.22e-07,1;UBERON:0001103,1.22e-07,1;UBERON:0010084,1.22e-07,1 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0,0.204000691244253,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0.188242339542605,0,0.449446968890169,0,0.641858054152187,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0.364295288292542,0,1.29818957461873,1.39303789839414,1.59549552622638,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0.71153252537342,0,0.402829317109147,0.760272105718513,0.488124115096339,0,0,0.446498641420399,0,0.225222960966644,0,0,0.549605231791222,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0.140450806702248,0,0.122834317311768,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0.773043412653187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0,0,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0.790204397959275,0,0,1.17002132569619,1.0404181360211,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,1.17217447210047,1.71072446022705,0,0.300343057843917,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,1.48418066444991,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0.15403067420883,0,1.46139224653261,0,0,0.850468526382578,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.534120355637366,0.962479855263359,0,0,0,0,0,0.199579371432817,0,0,0.649243880549111,0,0,0,0,0.50787533340481,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818149460017238,0,0,0,0.358042349351218,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,1.6156375993759,0.108647371922008,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0,0,0,0,0,0.067401132980677,1.60515529459758,0.234264445725339,0,0,1.21390189767046,0,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0.284609546029793,0.693373365065693,0.520679215005393,0,0,0.873633341210151,0.859930162358083,0,0,0,0.581934098930517,0,0,0,0,0,0.195551382734803,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0,0,5.02708322290058,3.89572720819862,0,5.79069101447074,14.5936856366434,12.4976016167449,4.63565960158411,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,3.14963448172101,2.32140586367385,0,0,0,0.262272940674991,0,0,0,7.14695326373367,19.2006671405975,0.76280561296425,0,0,0,1.19730191562487,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0,0.13223260174269,0.342173675768659,0,0,0,0,0,0,0,0.638341257770182,0,0,0.612691153526923,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.584580926518165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0.183428598521679,0,0,0,0.397832444232549,0.150420656698515,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0.535701835878287,0,0,0,0.354809480650555,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,1.24082554265728,0,0.223710863595585,0,0.121917924982269,0,2.36124455769368,1.1598144313382,0.971421986118279,0.467878926924211,0,0,0.33883824611688,0,0.452888530700021,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0,0,0.257831551894309,0.0999411559249289,0,0.352894871715692,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075778698218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| ||
|short_description=p19@GSN | |short_description=p19@GSN | ||
}} | }} |
Latest revision as of 20:44, 24 September 2015
Short description: | p19@GSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_GSN_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000545652, uc011lyi.1_5end |
EntrezGene: | GSN |
HGNC: | 4620 |
UniProt: | F5H1A8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 4.94e-26 | 5 |
common dendritic progenitor | 4.94e-26 | 5 |
conventional dendritic cell | 2.57e-17 | 8 |
dendritic cell | 3.88e-14 | 10 |
CD1a-positive Langerhans cell | 7.14e-14 | 2 |
immature CD1a-positive Langerhans cell | 7.14e-14 | 2 |
macrophage | 1.47e-09 | 6 |
light melanocyte | 3.39e-09 | 3 |
perirenal preadipocyte | 1.39e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.62e-14 | 27 |
cardiac chamber | 6.75e-10 | 3 |
valve | 1.04e-09 | 3 |
cardiac mesenchyme | 1.04e-09 | 3 |
cardial valve | 1.04e-09 | 3 |
tunica intima | 1.04e-09 | 3 |
heart layer | 1.04e-09 | 3 |
endocardium | 1.04e-09 | 3 |
endocardial cushion | 1.04e-09 | 3 |
presumptive endocardium | 1.04e-09 | 3 |
compound organ | 1.44e-09 | 68 |
tongue | 1.53e-09 | 3 |
gustatory system | 1.53e-09 | 3 |
future tongue | 1.53e-09 | 3 |
heart left ventricle | 4.28e-08 | 1 |
cardiac ventricle | 4.28e-08 | 1 |
future cardiac ventricle | 4.28e-08 | 1 |
left cardiac atrium | 5.22e-08 | 1 |
mitral valve | 5.96e-08 | 1 |
pulmonary valve | 7.26e-08 | 1 |
semi-lunar valve | 7.26e-08 | 1 |
chest muscle | 1.22e-07 | 1 |
respiratory system muscle | 1.22e-07 | 1 |
skeletal muscle of trunk | 1.22e-07 | 1 |
respiratory system skeletal muscle | 1.22e-07 | 1 |
thoracic segment muscle | 1.22e-07 | 1 |
chest organ | 1.22e-07 | 1 |
muscle of trunk | 1.22e-07 | 1 |
diaphragm | 1.22e-07 | 1 |
future diaphragm | 1.22e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.37e-14 | 2 |
vascular disease | 5.58e-08 | 1 |
ischemia | 5.58e-08 | 1 |
extrinsic cardiomyopathy | 5.58e-08 | 1 |
myocardial ischemia | 5.58e-08 | 1 |
myocardial infarction | 5.58e-08 | 1 |
cardiovascular system disease | 1.35e-07 | 4 |