FFCP PHASE1:Hg19::chr2:74730550..74730566,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151534 | |EntrezGene=151534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=237bp_to_AK096725_5end | |association_with_transcript=237bp_to_AK096725_5end | ||
|cluster_id=chr2:74730550..74730566,+ | |||
|description=CAGE_peak_3_at_LOC151534_5end | |description=CAGE_peak_3_at_LOC151534_5end | ||
|id=chr2:74730550..74730566,+ | |id=chr2:74730550..74730566,+ | ||
|ontology_enrichment_celltype=CL:0000839!6.47e-22!70;CL:0000557!1.34e-20!71;CL:0002194!2.97e-20!63;CL:0000576!2.97e-20!63;CL:0000040!2.97e-20!63;CL:0000559!2.97e-20!63;CL:0002057!9.08e-19!42;CL:0002009!1.48e-18!65;CL:0000766!9.81e-18!76;CL:0000860!8.59e-17!45;CL:0000763!4.29e-09!112;CL:0000049!4.29e-09!112 | |ontology_enrichment_celltype=CL:0000839!6.47e-22!70;CL:0000557!1.34e-20!71;CL:0002194!2.97e-20!63;CL:0000576!2.97e-20!63;CL:0000040!2.97e-20!63;CL:0000559!2.97e-20!63;CL:0002057!9.08e-19!42;CL:0002009!1.48e-18!65;CL:0000766!9.81e-18!76;CL:0000860!8.59e-17!45;CL:0000763!4.29e-09!112;CL:0000049!4.29e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.28e-26;33!CL:0002057;1.28e-26;33!CL:0000473;1.11e-25;39!CL:0000234;1.11e-25;39!CL:0000576;3.48e-15;48!CL:0000766;4.11e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,3.47e-28,66;CL:0000557,1.86e-27,67;CL:0000473,1.06e-25,48;CL:0000234,1.06e-25,48;CL:0002194,2.18e-25,59;CL:0000576,2.18e-25,59;CL:0000040,2.18e-25,59;CL:0000559,2.18e-25,59;CL:0000766,3.92e-24,72;CL:0002009,5.90e-24,61;CL:0000860,1.88e-21,42;CL:0002057,1.88e-21,42;CL:0000763,1.71e-13,108;CL:0000049,1.71e-13,108;CL:0002031,6.73e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;7.37e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.28e-21!448;UBERON:0004120!4.28e-21!448;UBERON:0006603!4.28e-21!448;UBERON:0002371!4.71e-19!80;UBERON:0003081!3.36e-18!216;UBERON:0002193!9.40e-18!112;UBERON:0002390!1.91e-16!102;UBERON:0003061!1.91e-16!102;UBERON:0002405!2.88e-16!115;UBERON:0001474!4.58e-16!86;UBERON:0004765!1.40e-13!101;UBERON:0001434!1.40e-13!101;UBERON:0002204!6.79e-12!167;UBERON:0000468!3.78e-11!659;UBERON:0000467!7.58e-10!625;UBERON:0000480!8.66e-10!626;UBERON:0002050!1.37e-08!605;UBERON:0005423!1.37e-08!605;UBERON:0000923!1.39e-08!604;UBERON:0005291!1.39e-08!604;UBERON:0006598!1.39e-08!604;UBERON:0002532!1.39e-08!604;UBERON:0000922!1.75e-08!612;UBERON:0000062!6.97e-07!511 | |ontology_enrichment_uberon=UBERON:0000926!4.28e-21!448;UBERON:0004120!4.28e-21!448;UBERON:0006603!4.28e-21!448;UBERON:0002371!4.71e-19!80;UBERON:0003081!3.36e-18!216;UBERON:0002193!9.40e-18!112;UBERON:0002390!1.91e-16!102;UBERON:0003061!1.91e-16!102;UBERON:0002405!2.88e-16!115;UBERON:0001474!4.58e-16!86;UBERON:0004765!1.40e-13!101;UBERON:0001434!1.40e-13!101;UBERON:0002204!6.79e-12!167;UBERON:0000468!3.78e-11!659;UBERON:0000467!7.58e-10!625;UBERON:0000480!8.66e-10!626;UBERON:0002050!1.37e-08!605;UBERON:0005423!1.37e-08!605;UBERON:0000923!1.39e-08!604;UBERON:0005291!1.39e-08!604;UBERON:0006598!1.39e-08!604;UBERON:0002532!1.39e-08!604;UBERON:0000922!1.75e-08!612;UBERON:0000062!6.97e-07!511 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.68e-26,76;UBERON:0002405,1.10e-23,93;UBERON:0001474,8.28e-23,82;UBERON:0004765,4.05e-22,90;UBERON:0002193,4.77e-21,108;UBERON:0002390,1.61e-19,98;UBERON:0003061,1.61e-19,98;UBERON:0001434,1.24e-18,100;UBERON:0003081,5.14e-18,203;UBERON:0000926,9.16e-13,315;UBERON:0004120,9.16e-13,315;UBERON:0006603,9.16e-13,315;UBERON:0002204,1.15e-12,167 | |||
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|phase1_expression=1.63510541343501,0.642301571672949,0.845726424575827,2.00146596706261,0.446961094427288,0.872338524100369,7.59899634504932,0.631719873426831,1.30592814099919,0.245733936501509,0,0.655324116390517,1.58260186937072,2.59909341216098,0.994192127183747,0.672325146451775,0,0,0.487932798790507,1.10808952269109,2.24400760368678,0.313454721478088,1.43117993565528,0.410623275218653,1.63205431473244,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0.553995408531877,0.802177789880567,0.868043482863407,4.92614043327834,3.88672399222775,6.18181362322048,4.65274364094607,4.1566353805769,7.27752183563449,6.27558399645349,5.75635043230556,5.57471467611186,4.31538588483226,2.0492856522328,3.31075121844019,7.92915065694223,1.93645405075148,8.12558919566051,3.9530891303947,4.91231070104122,3.37085226667627,2.75475503133812,2.24650318953266,3.19668562899521,3.29851300186716,3.59034583718937,3.40979800426155,6.38460324982885,5.10646702222026,4.35975574296902,5.7787193009051,5.21482918420201,4.99534342821768,4.84319602106695,2.20966581592539,3.48108626184973,0.633765858935825,1.4882300997553,0.628975936525128,2.47122988522289,3.45406853535464,1.76798145366788,0.855038231223746,0.39783335439818,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,2.01210257911091,1.02290049474824,0.361439152384566,0,0.724232594804119,0,0.973269740605272,0.661743720148475,0.443458794925128,0.43917392846563,0.196468613246569,0,0,0.97364218096405,0.870648686496336,2.12732736830184,0,0,0,0.79504962946682,0.860234595106124,0,0,0.838998872419812,0.825354125820202,0.417989933073621,1.8089173141853,2.13459757612026,2.00832367658802,0.402829317109147,0,1.46437234528902,1.47065232138347,0,1.25019619597712,1.34717623575702,1.68917220724983,6.13266549863533,2.84779697870439,1.28241220751285,0,0,1.3082821564276,0.993943903390637,0.25326102332916,1.05927344650575,0.860509862246441,0.709336764396714,0.560677600142307,1.06748995729705,0.24666754841716,3.42332138939743,1.75123873690594,2.45192854670188,0.151357427644931,0,0.70296429550139,0.312160076830321,0.570471821544449,0.448346041655403,0.939475989150119,1.13311061057692,0.702254033511242,1.22492502752936,0.982674538494144,1.23990937410919,1.18800285728205,0.494533858557114,6.37112953356618,2.87447256726495,0.336672227908132,0.875829639103749,1.93944880838928,0,0,0.600952235626387,1.47461838108027,0,0.640672166455702,0.423863802319124,0.300091096084402,0.412210116953756,0.257640540045629,0.37223371266318,0.506328996723799,0.779496041289589,0.757301322732344,0.736399189138395,0.80823028409406,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.725627385107593,0.756962552626885,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,1.30137480043828,1.18009283054671,1.20505514941741,2.20587945464788,1.96091499683166,1.66089433377768,2.42696354688296,1.17732879075208,1.15424147083917,4.42893272774789,0,1.6462960453256,0,0,0.982827216677626,0,0,2.09080345523293,0.514703430895577,0.109750285408626,1.1240175325762,0,0.0925884451585296,5.2129328849652,3.11980435583874,0,1.15930404975077,0.234817388471643,0.866198686566443,1.38895653772983,0.190254152234598,0.790204397959275,0,2.70838706696137,2.10603838625314,2.97262324577457,0,0,0.141775097242386,0,0,0,4.92663237895944,5.89924507888615,4.35389042635621,4.03535869567492,3.66103056936502,2.22242630022592,4.20187268114105,3.51652341630141,3.4214489204541,0.308482478109971,1.8020583470635,0.571652865261156,1.68196626518041,0.87192013766656,1.0267360014933,0.904902010304444,0,1.690605505112,0.26593811658487,1.04007436911366,2.57207374262142,0,2.39779961114489,0.285955987316295,2.71310802695722,3.29296134712308,1.95441710576241,0.355391948742546,0.791951872933429,0,0,0.399891964728228,4.86495122564762,1.50677127429638,4.21667878966063,0.479249710983165,1.14861935834114,0,1.01346914667305,0.410952645100767,0.537182889719687,0,0,0,0.128343036279748,1.01637849688985,0,0,0.335032530668698,0,0,0,0,0.24538298343828,5.50187573165645,1.62759014219841,0.207970861530807,0,0.315404830067869,0,1.20378439891088,0,1.03473071292505,0,0.921845842708516,0.347534457872331,3.13281851940385,3.43143423810856,0.82707210449155,0.431428401637234,0.213455115606889,13.0344855721892,1.66435439510497,1.20956117331872,0.744323423456331,0.920771839728375,1.12264037773229,1.02511319404561,1.02341449813341,0.965123526861645,1.48418066444991,0.616838775210622,1.59805552781814,1.47828880824856,3.63478100428535,0.464841513839837,1.32945394550784,0,0.184161977871793,0.229628896329213,1.45672934405374,2.22911505431021,1.35359883872224,0.231046011313244,0.784349769176855,0,0,2.27466768141793,2.72149928442425,0.431831832204279,3.08454505380579,1.89662506280697,2.00675909541941,0,0,0.671624264166535,0,0.261435451024901,0.512900250232778,0.656029291399411,0,1.54561517471583,0.27470839445503,0,0,0,0,0.87003646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| ||
|short_description=p3@LOC151534 | |short_description=p3@LOC151534 | ||
}} | }} |
Latest revision as of 11:30, 18 September 2015
Short description: | p3@LOC151534 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC151534_5end |
Coexpression cluster: | NA |
Association with transcript: | 237bp_to_AK096725_5end |
EntrezGene: | LOC151534 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 3.47e-28 | 66 |
granulocyte monocyte progenitor cell | 1.86e-27 | 67 |
defensive cell | 1.06e-25 | 48 |
phagocyte | 1.06e-25 | 48 |
monopoietic cell | 2.18e-25 | 59 |
monocyte | 2.18e-25 | 59 |
monoblast | 2.18e-25 | 59 |
promonocyte | 2.18e-25 | 59 |
myeloid leukocyte | 3.92e-24 | 72 |
macrophage dendritic cell progenitor | 5.90e-24 | 61 |
classical monocyte | 1.88e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.88e-21 | 42 |
myeloid cell | 1.71e-13 | 108 |
common myeloid progenitor | 1.71e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 6.73e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.68e-26 | 76 |
immune system | 1.10e-23 | 93 |
bone element | 8.28e-23 | 82 |
skeletal element | 4.05e-22 | 90 |
hemolymphoid system | 4.77e-21 | 108 |
hematopoietic system | 1.61e-19 | 98 |
blood island | 1.61e-19 | 98 |
skeletal system | 1.24e-18 | 100 |
lateral plate mesoderm | 5.14e-18 | 203 |
mesoderm | 9.16e-13 | 315 |
mesoderm-derived structure | 9.16e-13 | 315 |
presumptive mesoderm | 9.16e-13 | 315 |
musculoskeletal system | 1.15e-12 | 167 |