FFCP PHASE1:Hg19::chr4:25656780..25656793,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10568 | |EntrezGene=10568 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11020 | |HGNC=11020 | ||
|TSSclassifier=strong | |||
|UniProt=D6RA94 | |UniProt=D6RA94 | ||
|association_with_transcript=-129bp_to_ENST00000513204_5end | |association_with_transcript=-129bp_to_ENST00000513204_5end | ||
|cluster_id=chr4:25656780..25656793,+ | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_2_at_SLC34A2_5end | |description=CAGE_peak_2_at_SLC34A2_5end | ||
|id=chr4:25656780..25656793,+ | |id=chr4:25656780..25656793,+ | ||
|ontology_enrichment_celltype=CL:0000128!1.36e-11!7;CL:0000126!1.36e-11!7;CL:0000127!1.36e-11!7;CL:0002453!1.36e-11!7;CL:0002605!1.75e-10!3;CL:0002322!7.31e-10!5 | |ontology_enrichment_celltype=CL:0000128!1.36e-11!7;CL:0000126!1.36e-11!7;CL:0000127!1.36e-11!7;CL:0002453!1.36e-11!7;CL:0002605!1.75e-10!3;CL:0002322!7.31e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0002605;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.08e-19;1!UBERON:0007297;1.57e-10;2!UBERON:0003918;2.72e-08;10!UBERON:0007687;2.72e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.33e-07!2 | |ontology_enrichment_uberon=UBERON:0003127!1.33e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.83e-25;3!UBERON:0004054;1.83e-25;3!UBERON:0001000;8.95e-20;1!UBERON:0005352;8.95e-20;1!UBERON:0000998;1.08e-19;1!UBERON:0006868;1.08e-19;1!UBERON:0002171;1.88e-19;1!UBERON:0006518;1.88e-19;1!UBERON:0008949;1.88e-19;1!UBERON:0000101;1.88e-19;1!UBERON:0002167;1.88e-19;1!UBERON:0005904;2.26e-19;4!UBERON:0000058;2.53e-08;10!UBERON:0002048;5.79e-08;22!UBERON:0000117;5.79e-08;22!UBERON:0000171;5.79e-08;22!UBERON:0000170;5.79e-08;22!UBERON:0003135;1.20e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.83e-25,3;UBERON:0004054,1.83e-25,3;UBERON:0001000,8.95e-20,1;UBERON:0005352,8.95e-20,1;UBERON:0000998,1.08e-19,1;UBERON:0006868,1.08e-19,1;UBERON:0002171,1.88e-19,1;UBERON:0006518,1.88e-19,1;UBERON:0008949,1.88e-19,1;UBERON:0000101,1.88e-19,1;UBERON:0002167,1.88e-19,1;UBERON:0005904,2.26e-19,4;UBERON:0000058,2.66e-09,19;UBERON:0000080,4.61e-09,9;UBERON:0002120,4.61e-09,9;UBERON:0004875,4.61e-09,9;UBERON:0005721,4.61e-09,9;UBERON:0005754,4.61e-09,9;UBERON:0007297,4.61e-09,9;UBERON:0002048,5.66e-08,22;UBERON:0000117,5.66e-08,22;UBERON:0000171,5.66e-08,22;UBERON:0000170,5.66e-08,22;UBERON:0005597,5.66e-08,22;UBERON:0000118,5.66e-08,22;UBERON:0003135,1.20e-07,11;UBERON:0004876,1.42e-07,11;UBERON:0003887,5.15e-07,12;UBERON:0002113,6.30e-07,26;UBERON:0003918,6.30e-07,26;UBERON:0011143,6.30e-07,26;UBERON:0005095,6.30e-07,26;UBERON:0007687,6.30e-07,26 | |||
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| ||
|short_description=p2@SLC34A2 | |short_description=p2@SLC34A2 | ||
}} | }} |
Latest revision as of 10:36, 17 September 2015
Short description: | p2@SLC34A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC34A2_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | -129bp_to_ENST00000513204_5end |
EntrezGene: | SLC34A2 |
HGNC: | 11020 |
UniProt: | D6RA94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.83e-25 | 3 |
internal male genitalia | 1.83e-25 | 3 |
vas deferens | 8.95e-20 | 1 |
spermatic cord | 8.95e-20 | 1 |
seminal vesicle | 1.08e-19 | 1 |
seminal fluid secreting gland | 1.08e-19 | 1 |
lower lobe of right lung | 1.88e-19 | 1 |
right lung lobe | 1.88e-19 | 1 |
lower lobe of lung | 1.88e-19 | 1 |
lobe of lung | 1.88e-19 | 1 |
right lung | 1.88e-19 | 1 |
duct of male reproductive system | 2.26e-19 | 4 |
duct | 2.66e-09 | 19 |
mesonephros | 4.61e-09 | 9 |
pronephros | 4.61e-09 | 9 |
nephrogenic cord | 4.61e-09 | 9 |
pronephric mesoderm | 4.61e-09 | 9 |
rostral part of nephrogenic cord | 4.61e-09 | 9 |
presumptive pronephric mesoderm | 4.61e-09 | 9 |
lung | 5.66e-08 | 22 |
respiratory tube | 5.66e-08 | 22 |
respiration organ | 5.66e-08 | 22 |
pair of lungs | 5.66e-08 | 22 |
lung primordium | 5.66e-08 | 22 |
lung bud | 5.66e-08 | 22 |
male reproductive organ | 1.20e-07 | 11 |
urogenital ridge | 1.42e-07 | 11 |
intraembryonic coelom | 5.15e-07 | 12 |
kidney | 6.30e-07 | 26 |
kidney mesenchyme | 6.30e-07 | 26 |
upper urinary tract | 6.30e-07 | 26 |
kidney rudiment | 6.30e-07 | 26 |
kidney field | 6.30e-07 | 26 |