FFCP PHASE1:Hg19::chr5:82834954..82834973,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:82834954..82834973,+ | |||
|coexpression_cluster_id=C456 | |||
|description=CAGE_peak_at_chr5:82834954..82834973,+ | |description=CAGE_peak_at_chr5:82834954..82834973,+ | ||
|id=chr5:82834954..82834973,+ | |id=chr5:82834954..82834973,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.17e-23!42;CL:0000860!1.61e-20!45;CL:0002194!1.26e-11!63;CL:0000576!1.26e-11!63;CL:0000040!1.26e-11!63;CL:0000559!1.26e-11!63;CL:0002009!8.06e-11!65;CL:0000048!5.58e-10!430;CL:0000034!9.88e-10!444;CL:0000723!1.90e-09!436;CL:0000839!4.73e-09!70;CL:0000557!9.80e-09!71;CL:0000057!4.84e-08!75;CL:0000766!1.03e-07!76;CL:0002320!1.25e-07!365;CL:0000134!1.31e-07!358;CL:0002334!3.68e-07!12 | |ontology_enrichment_celltype=CL:0002057!3.17e-23!42;CL:0000860!1.61e-20!45;CL:0002194!1.26e-11!63;CL:0000576!1.26e-11!63;CL:0000040!1.26e-11!63;CL:0000559!1.26e-11!63;CL:0002009!8.06e-11!65;CL:0000048!5.58e-10!430;CL:0000034!9.88e-10!444;CL:0000723!1.90e-09!436;CL:0000839!4.73e-09!70;CL:0000557!9.80e-09!71;CL:0000057!4.84e-08!75;CL:0000766!1.03e-07!76;CL:0002320!1.25e-07!365;CL:0000134!1.31e-07!358;CL:0002334!3.68e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.13e-38;33!CL:0002057;6.13e-38;33!CL:0000473;3.83e-27;39!CL:0000234;3.83e-27;39!CL:0000576;6.19e-21;48!CL:0000766;1.22e-10;69!CL:0002334;5.30e-07;12!CL:0000135;9.36e-07;3!CL:0000388;9.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.53e-39,42;CL:0002057,8.53e-39,42;CL:0000473,1.12e-32,48;CL:0000234,1.12e-32,48;CL:0002194,3.70e-24,59;CL:0000576,3.70e-24,59;CL:0000040,3.70e-24,59;CL:0000559,3.70e-24,59;CL:0002009,4.57e-23,61;CL:0000839,1.25e-20,66;CL:0000557,3.48e-20,67;CL:0000766,3.70e-18,72;CL:0000134,1.10e-13,354;CL:0002320,4.88e-13,361;CL:0000219,2.44e-11,386;CL:0000048,3.32e-11,427;CL:0000723,9.15e-11,433;CL:0000034,9.85e-11,441;CL:0000763,2.82e-09,108;CL:0000049,2.82e-09,108;CL:0002087,3.10e-08,115;CL:0002031,1.42e-07,120;CL:0000135,6.20e-07,3;CL:0000388,6.20e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-28;42 | |||
|ontology_enrichment_disease=DOID:2394!1.09e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.83e-16;14!DOID:193;1.48e-07;29!DOID:120;4.91e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.73e-16,14;DOID:193,1.12e-07,29;DOID:120,4.21e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000468!1.06e-09!659;UBERON:0002204!1.62e-09!167;UBERON:0004765!2.30e-08!101;UBERON:0001434!2.30e-08!101;UBERON:0000467!3.76e-08!625;UBERON:0000480!4.87e-08!626;UBERON:0002371!7.27e-08!80;UBERON:0002384!9.97e-08!375;UBERON:0001474!2.34e-07!86 | |ontology_enrichment_uberon=UBERON:0000468!1.06e-09!659;UBERON:0002204!1.62e-09!167;UBERON:0004765!2.30e-08!101;UBERON:0001434!2.30e-08!101;UBERON:0000467!3.76e-08!625;UBERON:0000480!4.87e-08!626;UBERON:0002371!7.27e-08!80;UBERON:0002384!9.97e-08!375;UBERON:0001474!2.34e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;8.34e-10;5!UBERON:0000992;7.94e-07;13!UBERON:0007846;9.36e-07;3!UBERON:0000043;9.36e-07;3!UBERON:0007845;9.36e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.67e-18,76;UBERON:0001474,2.58e-17,82;UBERON:0004765,6.07e-15,90;UBERON:0001434,1.52e-14,100;UBERON:0002390,4.76e-14,98;UBERON:0003061,4.76e-14,98;UBERON:0002405,4.17e-13,93;UBERON:0002384,3.68e-12,371;UBERON:0002193,6.90e-12,108;UBERON:0000926,1.12e-10,315;UBERON:0004120,1.12e-10,315;UBERON:0006603,1.12e-10,315;UBERON:0002118,5.12e-10,5;UBERON:0002204,2.86e-09,167;UBERON:0003081,4.21e-09,203;UBERON:0007846,6.20e-07,3;UBERON:0000043,6.20e-07,3;UBERON:0007845,6.20e-07,3;UBERON:0000992,6.23e-07,13 | |||
|phase1_expression=0.54503513781167,1.71280419112787,0.704772020479856,2.00146596706261,0.446961094427288,1.74467704820074,0,0,1.30592814099919,0,0,0,0,0.247532705920093,0.331397375727916,0,1.20538905604795,0.730310090387373,0.975865597581014,0,0,0,0.286235987131057,0.410623275218653,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,2.76997704265939,5.81578897663411,3.90619567288533,0,0,0,5.96132778996215,1.88937971844405,1.94067248950253,4.64858073811369,3.28934310417461,2.16794459626573,6.90461741573161,3.07392847834921,1.18241114944293,3.7922024881028,3.22742341791913,1.35426486594342,8.65914761895982,1.36453075028923,0.224723484445085,1.53041946185451,0.641858054152187,2.55734850319616,3.62836430205388,2.19410023383795,2.55734850319616,15.6712988859435,1.70215567407342,3.11411124497787,9.2962006144995,7.30076085788282,0.868755378820466,5.44859552370032,0,0.632924774881769,0.211255286311942,0.212604299965044,0.209658645508376,2.13424399178341,1.35159203557356,1.92870704036496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.361439152384566,0,0.579386075843295,0,0.486634870302636,0.0945348171640679,0.886917589850256,1.22968699970376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,1.72131935057184,4.30254931123221,2.12801029319014,0,0,0.49333509683432,0,0.538842688278752,0.326923806226917,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,1.18800285728205,1.48360157567134,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0.45071417671979,0.453728732640084,1.07633781413317,1.06778694409284,0.635795703478686,0.300091096084402,0.103052529238439,0.515281080091258,0,0.675105328965065,0.389748020644795,0.757301322732344,0.184099797284599,0.161646056818812,2.4850671476163,0.604512589365842,0,0,0,0,0.243947412259191,0.397589304964456,0,0.207322110030741,1.51392510525377,1.09493207722749,0,3.21620469096443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,1.6437217193015,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55126058909333,0,0,1.59562869950922,0,0,0,0,0,0,0,0,0,0,0,0,0.899756920638513,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0.613457458595699,0,0,2.49565033836969,1.07057393278297,0.946214490203608,0.468565659970853,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0.620304078368662,0.862856803274467,0.533637789017222,0,0,0,3.2254015016441,2.76231551918512,1.12264037773229,0.896974044789907,1.02341449813341,3.05622450172854,0,0.925258162815933,1.06537035187876,0.657017248110473,2.07701771673448,0.581051892299796,0,1.20303882181971,0.184161977871793,0.459257792658427,0.546273504020151,0,0,0.385076685522074,0,0,0.73886140225013,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0.096670718292122,0.462145851343933,0,0,0.859361958946189,0.290033387828457,0.255679882248303,0.534192213880424,0.165284915360978,0.384380134730212,0,0,0.464845549297286,1.5740617341532,0,0,0.532306030317022,0,0.37064843820784,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,1.64722217841633,0.824686816419805,0.202182481573316,0,0,0.48763373908959,0.487426979262569,0,0,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0.430234056612155,0.294747123039363,0.35667105148125,0,1.26664581178598,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29694662238543,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.562677665642051,0.222617410045812,0.494411622680279,0,0.398495976502139,0,0,0,0,1.24415835064723,0,0,0,0.0986434056369336,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0.241192877250816,0,0,0,0,0,0,0.153900517007594,0.455768223388005,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,1.53036380815245,0.505492637027904,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.684526894459965,0,1.71906176567983,0,1.95497680890578,1.14580212005842,0,0.199679000498991,0,0,0.0671834724867263,0.360299883542404,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0.953423842781029,0.803765742325096,1.51293380256957,1.66176135211674,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,1.08599920350743,0.864221491201268,2.93928624098468,0,0,0,0.339936274560377,0,0,0.129282956361551,0.26446520348538,0.342173675768659,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.1220262649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|phase1_expression=0.54503513781167,1.71280419112787,0.704772020479856,2.00146596706261,0.446961094427288,1.74467704820074,0,0,1.30592814099919,0,0,0,0,0.247532705920093,0.331397375727916,0,1.20538905604795,0.730310090387373,0.975865597581014,0,0,0,0.286235987131057,0.410623275218653,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,2.76997704265939,5.81578897663411,3.90619567288533,0,0,0,5.96132778996215,1.88937971844405,1.94067248950253,4.64858073811369,3.28934310417461,2.16794459626573,6.90461741573161,3.07392847834921,1.18241114944293,3.7922024881028,3.22742341791913,1.35426486594342,8.65914761895982,1.36453075028923,0.224723484445085,1.53041946185451,0.641858054152187,2.55734850319616,3.62836430205388,2.19410023383795,2.55734850319616,15.6712988859435,1.70215567407342,3.11411124497787,9.2962006144995,7.30076085788282,0.868755378820466,5.44859552370032,0,0.632924774881769,0.211255286311942,0.212604299965044,0.209658645508376,2.13424399178341,1.35159203557356,1.92870704036496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.361439152384566,0,0.579386075843295,0,0.486634870302636,0.0945348171640679,0.886917589850256,1.22968699970376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,1.72131935057184,4.30254931123221,2.12801029319014,0,0,0.49333509683432,0,0.538842688278752,0.326923806226917,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,1.18800285728205,1.48360157567134,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0.45071417671979,0.453728732640084,1.07633781413317,1.06778694409284,0.635795703478686,0.300091096084402,0.103052529238439,0.515281080091258,0,0.675105328965065,0.389748020644795,0.757301322732344,0.184099797284599,0.161646056818812,2.4850671476163,0.604512589365842,0,0,0,0,0.243947412259191,0.397589304964456,0,0.207322110030741,1.51392510525377,1.09493207722749,0,3.21620469096443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,1.6437217193015,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55126058909333,0,0,1.59562869950922,0,0,0,0,0,0,0,0,0,0,0,0,0.899756920638513,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0.613457458595699,0,0,2.49565033836969,1.07057393278297,0.946214490203608,0.468565659970853,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0.620304078368662,0.862856803274467,0.533637789017222,0,0,0,3.2254015016441,2.76231551918512,1.12264037773229,0.896974044789907,1.02341449813341,3.05622450172854,0,0.925258162815933,1.06537035187876,0.657017248110473,2.07701771673448,0.581051892299796,0,1.20303882181971,0.184161977871793,0.459257792658427,0.546273504020151,0,0,0.385076685522074,0,0,0.73886140225013,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0.096670718292122,0.462145851343933,0,0,0.859361958946189,0.290033387828457,0.255679882248303,0.534192213880424,0.165284915360978,0.384380134730212,0,0,0.464845549297286,1.5740617341532,0,0,0.532306030317022,0,0.37064843820784,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,1.64722217841633,0.824686816419805,0.202182481573316,0,0,0.48763373908959,0.487426979262569,0,0,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0.430234056612155,0.294747123039363,0.35667105148125,0,1.26664581178598,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29694662238543,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.562677665642051,0.222617410045812,0.494411622680279,0,0.398495976502139,0,0,0,0,1.24415835064723,0,0,0,0.0986434056369336,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0.241192877250816,0,0,0,0,0,0,0.153900517007594,0.455768223388005,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,1.53036380815245,0.505492637027904,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.684526894459965,0,1.71906176567983,0,1.95497680890578,1.14580212005842,0,0.199679000498991,0,0,0.0671834724867263,0.360299883542404,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0.953423842781029,0.803765742325096,1.51293380256957,1.66176135211674,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,1.08599920350743,0.864221491201268,2.93928624098468,0,0,0,0.339936274560377,0,0,0.129282956361551,0.26446520348538,0.342173675768659,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.1220262649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| ||
|short_description=p@chr5:82834954..82834973,+ | |short_description=p@chr5:82834954..82834973,+ | ||
}} | }} |
Latest revision as of 16:56, 30 July 2015
Short description: | p@chr5:82834954..82834973, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:82834954..82834973, + |
Coexpression cluster: | C456_Fibroblast_Smooth_CD14_Preadipocyte_Lens_mesenchymal_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.53e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.53e-39 | 42 |
defensive cell | 1.12e-32 | 48 |
phagocyte | 1.12e-32 | 48 |
monopoietic cell | 3.70e-24 | 59 |
monocyte | 3.70e-24 | 59 |
monoblast | 3.70e-24 | 59 |
promonocyte | 3.70e-24 | 59 |
macrophage dendritic cell progenitor | 4.57e-23 | 61 |
myeloid lineage restricted progenitor cell | 1.25e-20 | 66 |
granulocyte monocyte progenitor cell | 3.48e-20 | 67 |
myeloid leukocyte | 3.70e-18 | 72 |
mesenchymal cell | 1.10e-13 | 354 |
connective tissue cell | 4.88e-13 | 361 |
motile cell | 2.44e-11 | 386 |
multi fate stem cell | 3.32e-11 | 427 |
somatic stem cell | 9.15e-11 | 433 |
stem cell | 9.85e-11 | 441 |
myeloid cell | 2.82e-09 | 108 |
common myeloid progenitor | 2.82e-09 | 108 |
nongranular leukocyte | 3.10e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.42e-07 | 120 |
fibrocyte | 6.20e-07 | 3 |
tendon cell | 6.20e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.67e-18 | 76 |
bone element | 2.58e-17 | 82 |
skeletal element | 6.07e-15 | 90 |
skeletal system | 1.52e-14 | 100 |
hematopoietic system | 4.76e-14 | 98 |
blood island | 4.76e-14 | 98 |
immune system | 4.17e-13 | 93 |
connective tissue | 3.68e-12 | 371 |
hemolymphoid system | 6.90e-12 | 108 |
mesoderm | 1.12e-10 | 315 |
mesoderm-derived structure | 1.12e-10 | 315 |
presumptive mesoderm | 1.12e-10 | 315 |
right ovary | 5.12e-10 | 5 |
musculoskeletal system | 2.86e-09 | 167 |
lateral plate mesoderm | 4.21e-09 | 203 |
dense regular connective tissue | 6.20e-07 | 3 |
tendon | 6.20e-07 | 3 |
regular connective tissue | 6.20e-07 | 3 |
female gonad | 6.23e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.73e-16 | 14 |
reproductive organ cancer | 1.12e-07 | 29 |
female reproductive organ cancer | 4.21e-07 | 27 |