FFCP PHASE1:Hg19::chr7:27142290..27142310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3199 | |EntrezGene=3199 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5103 | |HGNC=5103 | ||
|TSSclassifier=strong | |||
|UniProt=O43364 | |UniProt=O43364 | ||
|association_with_transcript=83bp_to_NM_006735,uc003syh.2_5end | |association_with_transcript=83bp_to_NM_006735,uc003syh.2_5end | ||
|cluster_id=chr7:27142290..27142310,- | |||
|description=CAGE_peak_1_at_HOXA2_5end | |description=CAGE_peak_1_at_HOXA2_5end | ||
|id=chr7:27142290..27142310,- | |id=chr7:27142290..27142310,- | ||
|ontology_enrichment_celltype=CL:0000222!2.53e-17!119;CL:0000183!2.40e-11!59;CL:0000192!3.11e-10!42;CL:0000514!3.11e-10!42;CL:0000187!1.06e-09!54;CL:0000071!2.07e-09!18;CL:0002546!2.07e-09!18;CL:0002139!2.61e-09!24;CL:0000213!2.66e-09!57;CL:0000215!2.66e-09!57;CL:0000680!3.92e-09!57;CL:0000056!3.92e-09!57;CL:0000355!3.92e-09!57;CL:0000393!3.14e-08!60;CL:0000211!3.14e-08!60;CL:0000076!3.78e-08!62;CL:0000359!7.38e-07!32;CL:0000220!7.77e-07!246;CL:0002321!7.88e-07!248 | |ontology_enrichment_celltype=CL:0000222!2.53e-17!119;CL:0000183!2.40e-11!59;CL:0000192!3.11e-10!42;CL:0000514!3.11e-10!42;CL:0000187!1.06e-09!54;CL:0000071!2.07e-09!18;CL:0002546!2.07e-09!18;CL:0002139!2.61e-09!24;CL:0000213!2.66e-09!57;CL:0000215!2.66e-09!57;CL:0000680!3.92e-09!57;CL:0000056!3.92e-09!57;CL:0000355!3.92e-09!57;CL:0000393!3.14e-08!60;CL:0000211!3.14e-08!60;CL:0000076!3.78e-08!62;CL:0000359!7.38e-07!32;CL:0000220!7.77e-07!246;CL:0002321!7.88e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000071;5.01e-08;18!CL:0002139;3.92e-07;24!CL:0002539;4.56e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.60e-12,121;CL:0000071,4.25e-08,18;CL:0002546,4.25e-08,18;CL:0000213,4.40e-08,58;CL:0000215,4.40e-08,58;CL:0000192,1.18e-07,43;CL:0000514,1.18e-07,43;CL:0000076,1.63e-07,63;CL:0002139,3.65e-07,24;CL:0002539,4.21e-07,10;CL:0000187,7.57e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002546;5.01e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.09e-17!69;UBERON:0001981!1.01e-16!60;UBERON:0007500!1.01e-16!60;UBERON:0004537!1.01e-16!60;UBERON:0006965!1.01e-16!60;UBERON:0004872!8.02e-16!84;UBERON:0003914!1.59e-15!118;UBERON:0002049!1.17e-14!79;UBERON:0007798!1.17e-14!79;UBERON:0001637!6.89e-14!42;UBERON:0003509!6.89e-14!42;UBERON:0004572!6.89e-14!42;UBERON:0004573!4.25e-13!33;UBERON:0004571!4.25e-13!33;UBERON:0000947!3.46e-11!21;UBERON:0010191!3.46e-11!21;UBERON:0000025!2.48e-10!194;UBERON:0004535!3.93e-10!110;UBERON:0004111!5.43e-10!241;UBERON:0000490!6.53e-10!138;UBERON:0002385!7.45e-10!63;UBERON:0001015!7.45e-10!63;UBERON:0000383!7.45e-10!63;UBERON:0001009!8.16e-10!113;UBERON:0000483!8.30e-10!309;UBERON:0001986!2.07e-09!18;UBERON:0004638!2.07e-09!18;UBERON:0004852!2.07e-09!18;UBERON:0000119!2.13e-09!312;UBERON:0001134!4.30e-09!61;UBERON:0002036!4.30e-09!61;UBERON:0003082!4.30e-09!61;UBERON:0002100!1.19e-08!216;UBERON:0000477!1.67e-08!286;UBERON:0005256!3.84e-08!143;UBERON:0001135!4.51e-08!15;UBERON:0003076!4.73e-08!15;UBERON:0003057!4.73e-08!15;UBERON:0004290!6.19e-08!70;UBERON:0000487!8.31e-08!22;UBERON:0009569!2.33e-07!113;UBERON:0006914!7.22e-07!25 | |ontology_enrichment_uberon=UBERON:0000055!1.09e-17!69;UBERON:0001981!1.01e-16!60;UBERON:0007500!1.01e-16!60;UBERON:0004537!1.01e-16!60;UBERON:0006965!1.01e-16!60;UBERON:0004872!8.02e-16!84;UBERON:0003914!1.59e-15!118;UBERON:0002049!1.17e-14!79;UBERON:0007798!1.17e-14!79;UBERON:0001637!6.89e-14!42;UBERON:0003509!6.89e-14!42;UBERON:0004572!6.89e-14!42;UBERON:0004573!4.25e-13!33;UBERON:0004571!4.25e-13!33;UBERON:0000947!3.46e-11!21;UBERON:0010191!3.46e-11!21;UBERON:0000025!2.48e-10!194;UBERON:0004535!3.93e-10!110;UBERON:0004111!5.43e-10!241;UBERON:0000490!6.53e-10!138;UBERON:0002385!7.45e-10!63;UBERON:0001015!7.45e-10!63;UBERON:0000383!7.45e-10!63;UBERON:0001009!8.16e-10!113;UBERON:0000483!8.30e-10!309;UBERON:0001986!2.07e-09!18;UBERON:0004638!2.07e-09!18;UBERON:0004852!2.07e-09!18;UBERON:0000119!2.13e-09!312;UBERON:0001134!4.30e-09!61;UBERON:0002036!4.30e-09!61;UBERON:0003082!4.30e-09!61;UBERON:0002100!1.19e-08!216;UBERON:0000477!1.67e-08!286;UBERON:0005256!3.84e-08!143;UBERON:0001135!4.51e-08!15;UBERON:0003076!4.73e-08!15;UBERON:0003057!4.73e-08!15;UBERON:0004290!6.19e-08!70;UBERON:0000487!8.31e-08!22;UBERON:0009569!2.33e-07!113;UBERON:0006914!7.22e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000947;8.20e-12;21!UBERON:0010191;8.20e-12;21!UBERON:0004573;2.40e-11;33!UBERON:0004571;2.40e-11;33!UBERON:0001637;6.15e-09;42!UBERON:0003509;6.15e-09;42!UBERON:0004572;6.15e-09;42!UBERON:0000055;2.99e-08;65!UBERON:0007500;3.55e-08;56!UBERON:0001981;3.55e-08;56!UBERON:0004537;3.55e-08;56!UBERON:0004638;5.01e-08;18!UBERON:0001986;5.01e-08;18!UBERON:0004852;5.01e-08;18!UBERON:0004237;4.56e-07;10!UBERON:0004695;4.56e-07;10!UBERON:0002111;4.56e-07;10!UBERON:0004178;4.56e-07;10!UBERON:0000487;5.13e-07;22!UBERON:0011135;5.73e-07;5!UBERON:0002216;5.73e-07;5!UBERON:0011134;5.73e-07;5!UBERON:0002209;5.73e-07;5!UBERON:0002213;5.73e-07;5!UBERON:0007844;5.73e-07;5!UBERON:0011138;5.73e-07;5!UBERON:0001130;5.73e-07;5!UBERON:0001066;5.73e-07;5!UBERON:0001468;5.73e-07;5!UBERON:0004733;6.36e-07;12!UBERON:0002028;6.36e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,5.85e-14,68;UBERON:0007500,2.00e-13,59;UBERON:0001981,2.00e-13,59;UBERON:0004537,2.00e-13,59;UBERON:0006965,2.00e-13,59;UBERON:0001637,5.32e-12,42;UBERON:0003509,5.32e-12,42;UBERON:0004572,5.32e-12,42;UBERON:0004872,5.33e-12,83;UBERON:0000947,5.35e-12,21;UBERON:0010191,5.35e-12,21;UBERON:0004573,1.15e-11,33;UBERON:0004571,1.15e-11,33;UBERON:0002049,1.42e-11,78;UBERON:0007798,1.42e-11,78;UBERON:0003076,1.66e-10,15;UBERON:0003057,1.66e-10,15;UBERON:0003914,3.54e-10,117;UBERON:0000025,1.61e-09,192;UBERON:0004111,1.63e-08,240;UBERON:0004638,4.25e-08,18;UBERON:0001986,4.25e-08,18;UBERON:0004852,4.25e-08,18;UBERON:0000487,3.79e-07,22;UBERON:0000483,4.17e-07,306;UBERON:0004237,4.21e-07,10;UBERON:0004695,4.21e-07,10;UBERON:0002111,4.21e-07,10;UBERON:0004178,4.21e-07,10;UBERON:0004535,4.31e-07,109;UBERON:0011135,4.88e-07,5;UBERON:0002216,4.88e-07,5;UBERON:0011134,4.88e-07,5;UBERON:0002209,4.88e-07,5;UBERON:0002213,4.88e-07,5;UBERON:0005856,4.88e-07,5;UBERON:0005866,4.88e-07,5;UBERON:0005863,4.88e-07,5;UBERON:0007844,4.88e-07,5;UBERON:0011138,4.88e-07,5;UBERON:0001130,4.88e-07,5;UBERON:0001066,4.88e-07,5;UBERON:0001468,4.88e-07,5;UBERON:0004733,5.77e-07,12;UBERON:0002028,5.77e-07,12;UBERON:0007277,5.77e-07,12;UBERON:0000119,7.41e-07,309;UBERON:0002385,9.52e-07,64;UBERON:0001015,9.52e-07,64;UBERON:0000383,9.52e-07,64 | |||
|phase1_expression=0.363356758541113,0,2.11431606143957,2.00146596706261,2.68176656656373,2.61701557230111,0,0,0,1.96587149201207,0,0.873765488520689,1.84636884759917,2.47532705920093,2.98257638155124,2.6893005858071,3.01347264011988,2.92124036154949,3.41552959153355,3.57051068422685,6.12002073732759,6.89600387251793,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,2.18638648103376,1.72046919021225,2.77712401286075,3.39184765154406,1.67799774483962,2.20094433552054,1.04497483268405,0,0.35576626268671,0,1.61131726843659,3.80136052859256,0.24406205754817,0.735326160691737,0,2.58969212023831,2.02076435363553,1.91439516821648,1.53316637465883,0.949265659568129,0.916008719652036,0,0,0,0,0.12663051166458,1.98613771219828,3.44203944898576,4.61068896857864,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.298897361103602,0,0.323745888736263,0,0,0,0,0,0,2.73048408581408,2.15585442544872,0,0.375355559615893,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,1.2781333715647,5.80501908086074,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,2.8810180793198,2.94017422771084,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,1.58803092537181,0.462985512576611,1.14152491340759,0,0,0,0,0,0,0,0,1.25381931783988,2.3250715081117,3.06706143332169,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,2.83698264046557,0.532844358032199,5.29018576535146,0,0,0,3.19852753868291,0,3.61727252471503,2.61460037580088,2.19940580600526,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,2.4538298343828,5.00170521059677,7.05289061619313,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0.737476674166813,0,0.195801157462741,1.02943027143257,0,0,0,0.303127571446259,6.65741758041988,1.81434175997808,0.496215615637554,0.153461973288062,0,3.97231362692673,1.53512174720011,0.482561763430822,0,0.925258162815933,0.532685175939381,1.31403449622095,1.55776328755086,0.464841513839837,0,0,0.184161977871793,0,0,0,0.451199612907412,0.308061348417659,2.35304930753057,0,1.37217117560738,1.13733384070897,0.850468526382578,0.215915916102139,0,1.08378575017541,1.50506932156456,0.509752546090077,0,0.895499018888713,0,0,0,0,0,3.709476419318,0,0,0.574265537996172,0,0,0,2.31072925671967,3.22357716924872,0.413509717453592,0,0.145016693914229,1.36362603865761,0,0,0,0,0,1.39453664789186,4.09256050879832,1.3940745403212,0.924100740528266,0,3.47973196830029,1.8532421910392,0.286249773483982,0,0.316379424718726,1.33441135746677,2.303080121802,3.42351190427136,5.40945521474092,0,0.539617372749944,0.54907405947211,0.589062011728432,0.202182481573316,0,0,2.92580243453754,2.43713489631284,1.05650146756755,0.136499911407986,1.97967604735198,6.78048699721457,11.5786722144686,0.66343897524122,0.876901770507525,4.6302042741335,5.9030527684197,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,3.10674542563371,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,2.37571744666111,0.614321404198464,0,0.140669416410513,0,0,0,4.18420775327246,0.828851746593443,0,0.306806047506464,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,4.5142498682656,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44849212238722,0,0,4.97630965539252,1.59223616106011,1.83309043480088,0.296521128680622,0.123563938946503,0,0,0.802577647298789,0,0,0,0,3.94584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0.569219092059585,0,0.694238953340524,0,2.96001302373369,3.14508002835654,3.26773461696071,0,0,0,4.07353869251362,0,0,0,0,0,0.195551382734803,0,3.20179492109029,0,0,10.4228302510983,23.8517047028131,0,0,0,0,0,1.12198039399954,7.51271533743949,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.470284307407084,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,1.10327990218877,2.15063811353492,0,0,0,2.1440859791201,0,0,0,0,0,0,0,5.11164065356265,0,0.293104467356165,0,3.61992277812342,0.13223260174269,0,0,2.13574825135389,2.67247318669432,2.89967338743037,0.992332043623902,0,0,0,0.544017803369474,0,0,0,0,0,0,0,3.44045517414043,7.09945929835855,9.68703885885582,0,2.99952979109056,0,0,0,12.6450424567858,5.07223600137888,1.19403842309499,1.16856654923612,0.554805861502613,0,0,0,0.228840068396924,1.20984739010591,2.33155800874171,0.73927574994817,0.477890301491107,0,0.155262956876259,0,1.06336685823198,1.04349012362347,2.40412174395549,0.761610424337591,1.22061219961398,0,0.322231671127465,0,0,0.800055529326307,1.37358282073117,0.673498977531838,0,0,3.64550705337374,0,2.493765180635,7.64024165268652,7.58683783970049,0.537266523244462,0,6.79780553693992,0.706756583783524,7.7165615308365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| ||
|short_description=p1@HOXA2 | |short_description=p1@HOXA2 | ||
}} | }} |
Latest revision as of 00:54, 18 September 2015
Short description: | p1@HOXA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 83bp_to_NM_006735, uc003syh.2_5end |
EntrezGene: | HOXA2 |
HGNC: | 5103 |
UniProt: | O43364 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.60e-12 | 121 |
blood vessel endothelial cell | 4.25e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.25e-08 | 18 |
lining cell | 4.40e-08 | 58 |
barrier cell | 4.40e-08 | 58 |
smooth muscle cell | 1.18e-07 | 43 |
smooth muscle myoblast | 1.18e-07 | 43 |
squamous epithelial cell | 1.63e-07 | 63 |
endothelial cell of vascular tree | 3.65e-07 | 24 |
aortic smooth muscle cell | 4.21e-07 | 10 |
muscle cell | 7.57e-07 | 55 |