FFCP PHASE1:Hg19::chr16:1306093..1306102,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:1306093..1306102,+
|short_description=p3@TPSD1
|description=CAGE_peak_3_at_TPSD1_5end
|association_with_transcript=-31bp_to_ENST00000211076_5end
|EntrezG...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23430 | |EntrezGene=23430 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14118 | |HGNC=14118 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZJ3 | |UniProt=Q9BZJ3 | ||
|association_with_transcript=-31bp_to_ENST00000211076_5end | |||
|cluster_id=chr16:1306093..1306102,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_3_at_TPSD1_5end | |||
|id=chr16:1306093..1306102,+ | |||
|ontology_enrichment_celltype=CL:0002274!6.58e-30!5;CL:0000457!6.58e-30!5;CL:0002191!6.58e-30!5;CL:0000097!6.58e-30!5;CL:0000831!6.58e-30!5;CL:0002028!6.58e-30!5;CL:0000163!1.59e-16!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.92e-110;5!CL:0000163;2.13e-61;9!CL:0000151;2.41e-14;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.92e-110,5;CL:0002028,4.92e-110,5;CL:0000163,2.13e-61,9;CL:0000151,1.28e-15,36;CL:0000839,1.81e-08,66;CL:0000557,2.40e-08,67;CL:0000766,8.81e-08,72;CL:0000763,2.61e-07,108;CL:0000049,2.61e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.13e-23;1!UBERON:0003056;1.40e-08;3 | |||
|ontology_enrichment_disease=DOID:8552!3.78e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!8.45e-09!10;UBERON:0009145!8.45e-09!10;UBERON:0001723!2.51e-08!3;UBERON:0001033!2.51e-08!3;UBERON:0010056!2.51e-08!3;UBERON:0006562!5.21e-08!11;UBERON:0007023!1.26e-07!115;UBERON:0000941!2.99e-07!1;UBERON:0004904!2.99e-07!1;UBERON:0002464!2.99e-07!1;UBERON:0001021!2.99e-07!1;UBERON:0001785!2.99e-07!1;UBERON:0000029!3.57e-07!1;UBERON:0002171!5.06e-07!1;UBERON:0006518!5.06e-07!1;UBERON:0008949!5.06e-07!1;UBERON:0000101!5.06e-07!1;UBERON:0002167!5.06e-07!1;UBERON:0001154!6.76e-07!1;UBERON:0001153!6.76e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.13e-23;1!UBERON:0001785;5.13e-23;1!UBERON:0002464;5.13e-23;1!UBERON:0004904;5.13e-23;1!UBERON:0001021;5.13e-23;1!UBERON:0003714;3.24e-12;2!UBERON:0005162;3.24e-12;2!UBERON:0000122;3.24e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.10e-23,1;UBERON:0001785,4.10e-23,1;UBERON:0002464,4.10e-23,1;UBERON:0004904,4.10e-23,1;UBERON:0001021,4.10e-23,1;UBERON:0003902,4.10e-23,1;UBERON:0005425,4.10e-23,1;UBERON:0003714,2.90e-12,2;UBERON:0005162,2.90e-12,2;UBERON:0000122,2.90e-12,2;UBERON:0002371,2.21e-07,76;UBERON:0001474,7.47e-07,82;UBERON:0001781,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85326475791887,18.8423648788304,37.5263889128797,34.5887888200707,32.570547824006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,4.02179807175377,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831058409500782,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0.342233301085281,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85326475791887,18.8423648788304,37.5263889128797,34.5887888200707,32.570547824006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,4.02179807175377,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831058409500782,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0.342233301085281,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@TPSD1 | |||
}} | }} |
Latest revision as of 16:28, 24 September 2015
Short description: | p3@TPSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TPSD1_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -31bp_to_ENST00000211076_5end |
EntrezGene: | TPSD1 |
HGNC: | 14118 |
UniProt: | Q9BZJ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.92e-110 | 5 |
basophil mast progenitor cell | 4.92e-110 | 5 |
endocrine cell | 2.13e-61 | 9 |
secretory cell | 1.28e-15 | 36 |
myeloid lineage restricted progenitor cell | 1.81e-08 | 66 |
granulocyte monocyte progenitor cell | 2.40e-08 | 67 |
myeloid leukocyte | 8.81e-08 | 72 |
myeloid cell | 2.61e-07 | 108 |
common myeloid progenitor | 2.61e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.10e-23 | 1 |
cranial nerve | 4.10e-23 | 1 |
nerve trunk | 4.10e-23 | 1 |
nerve connecting eye with brain | 4.10e-23 | 1 |
nerve | 4.10e-23 | 1 |
retinal neural layer | 4.10e-23 | 1 |
presumptive neural retina | 4.10e-23 | 1 |
neural tissue | 2.90e-12 | 2 |
multi cell component structure | 2.90e-12 | 2 |
neuron projection bundle | 2.90e-12 | 2 |
bone marrow | 2.21e-07 | 76 |
bone element | 7.47e-07 | 82 |
layer of retina | 9.11e-07 | 4 |