FFCP PHASE1:Hg19::chr16:21222887..21222900,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:21222887..21222900,-
|short_description=p1@ZP2
|description=CAGE_peak_1_at_ZP2_5end
|association_with_transcript=-19bp_to_ENST00000219593,NM_003460_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7783 | |EntrezGene=7783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13188 | |HGNC=13188 | ||
|TSSclassifier=strong | |||
|UniProt=Q05996 | |UniProt=Q05996 | ||
|association_with_transcript=-19bp_to_ENST00000219593,NM_003460_5end | |||
|cluster_id=chr16:21222887..21222900,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_1_at_ZP2_5end | |||
|id=chr16:21222887..21222900,- | |||
|ontology_enrichment_celltype=CL:0005020!5.64e-11!6;CL:0002138!5.64e-11!6;CL:0005022!5.64e-11!6 | |||
|ontology_enrichment_celltype_v019=CL:0002149;9.23e-07;6!CL:0002255;9.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,9.49e-07,6;CL:0002255,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.06e-99;3!UBERON:0006298;5.05e-34;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;9.23e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004733!5.14e-21!12;UBERON:0002028!5.14e-21!12;UBERON:0007277!5.14e-21!12;UBERON:0004732!2.32e-19!13;UBERON:0003076!1.03e-16!15;UBERON:0003057!1.03e-16!15;UBERON:0002680!4.26e-13!9;UBERON:0001895!4.26e-13!9;UBERON:0010092!4.26e-13!9;UBERON:0002037!1.36e-11!6;UBERON:0006215!1.36e-11!6;UBERON:0001896!2.47e-10!3;UBERON:0005290!2.47e-10!3;UBERON:0010096!2.47e-10!3;UBERON:0001736!1.22e-08!1;UBERON:0006298!1.22e-08!1;UBERON:0002298!1.93e-08!8;UBERON:0001473!2.37e-08!8;UBERON:0004536!2.37e-08!8;UBERON:0006558!2.37e-08!8;UBERON:0002465!9.07e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.84e-50;6!UBERON:0004733;2.40e-44;12!UBERON:0002028;2.40e-44;12!UBERON:0004732;5.30e-41;13!UBERON:0001736;5.05e-34;1!UBERON:0002680;8.87e-34;9!UBERON:0001895;8.87e-34;9!UBERON:0001829;9.07e-18;2!UBERON:0001896;3.06e-12;3!UBERON:0005290;3.06e-12;3!UBERON:0000073;6.33e-08;53!UBERON:0002616;6.33e-08;53!UBERON:0001044;8.48e-07;6!UBERON:0003293;8.48e-07;6!UBERON:0003294;8.48e-07;6!UBERON:0010047;8.48e-07;6!UBERON:0003408;8.48e-07;6!UBERON:0000167;8.48e-07;6!UBERON:0002298;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.84e-50,6;UBERON:0006215,3.84e-50,6;UBERON:0004733,2.27e-44,12;UBERON:0002028,2.27e-44,12;UBERON:0007277,2.27e-44,12;UBERON:0004732,5.03e-41,13;UBERON:0003076,1.14e-35,15;UBERON:0003057,1.14e-35,15;UBERON:0001736,5.05e-34,1;UBERON:0006298,5.05e-34,1;UBERON:0002680,8.87e-34,9;UBERON:0001895,8.87e-34,9;UBERON:0010092,8.87e-34,9;UBERON:0001829,9.07e-18,2;UBERON:0001896,2.89e-12,3;UBERON:0005290,2.89e-12,3;UBERON:0010096,2.89e-12,3;UBERON:0000073,2.17e-10,53;UBERON:0002616,2.17e-10,53;UBERON:0001049,7.17e-10,56;UBERON:0005068,7.17e-10,56;UBERON:0006241,7.17e-10,56;UBERON:0007135,7.17e-10,56;UBERON:0000955,3.92e-08,68;UBERON:0006238,3.92e-08,68;UBERON:0007023,1.08e-07,114;UBERON:0001017,6.23e-07,81;UBERON:0003075,6.23e-07,82;UBERON:0007284,6.23e-07,82;UBERON:0001044,8.48e-07,6;UBERON:0003293,8.48e-07,6;UBERON:0003294,8.48e-07,6;UBERON:0010047,8.48e-07,6;UBERON:0000167,8.48e-07,6;UBERON:0002298,8.97e-07,6 | |||
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|short_description=p1@ZP2 | |||
}} | }} |
Latest revision as of 03:37, 25 September 2015
Short description: | p1@ZP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZP2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -19bp_to_ENST00000219593, NM_003460_5end |
EntrezGene: | ZP2 |
HGNC: | 13188 |
UniProt: | Q05996 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 9.49e-07 | 6 |
stromal cell of endometrium | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.84e-50 | 6 |
rhombic lip | 3.84e-50 | 6 |
segmental subdivision of hindbrain | 2.27e-44 | 12 |
hindbrain | 2.27e-44 | 12 |
presumptive hindbrain | 2.27e-44 | 12 |
segmental subdivision of nervous system | 5.03e-41 | 13 |
posterior neural tube | 1.14e-35 | 15 |
chordal neural plate | 1.14e-35 | 15 |
submandibular gland | 5.05e-34 | 1 |
submandibular gland primordium | 5.05e-34 | 1 |
regional part of metencephalon | 8.87e-34 | 9 |
metencephalon | 8.87e-34 | 9 |
future metencephalon | 8.87e-34 | 9 |
major salivary gland | 9.07e-18 | 2 |
medulla oblongata | 2.89e-12 | 3 |
myelencephalon | 2.89e-12 | 3 |
future myelencephalon | 2.89e-12 | 3 |
regional part of nervous system | 2.17e-10 | 53 |
regional part of brain | 2.17e-10 | 53 |
neural tube | 7.17e-10 | 56 |
neural rod | 7.17e-10 | 56 |
future spinal cord | 7.17e-10 | 56 |
neural keel | 7.17e-10 | 56 |
brain | 3.92e-08 | 68 |
future brain | 3.92e-08 | 68 |
adult organism | 1.08e-07 | 114 |
central nervous system | 6.23e-07 | 81 |
neural plate | 6.23e-07 | 82 |
presumptive neural plate | 6.23e-07 | 82 |
saliva-secreting gland | 8.48e-07 | 6 |
gland of oral region | 8.48e-07 | 6 |
gland of foregut | 8.48e-07 | 6 |
oral gland | 8.48e-07 | 6 |
oral cavity | 8.48e-07 | 6 |
brainstem | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 9.49e-07 | 6 |