FFCP PHASE1:Hg19::chr5:179498934..179498943,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55819 | |EntrezGene=55819 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18280 | |HGNC=18280 | ||
|TSSclassifier=strong | |||
|UniProt=Q86XS8 | |UniProt=Q86XS8 | ||
|association_with_transcript=157bp_to_ENST00000261947_5end | |association_with_transcript=157bp_to_ENST00000261947_5end | ||
|cluster_id=chr5:179498934..179498943,- | |||
|description=CAGE_peak_11_at_RNF130_5end | |description=CAGE_peak_11_at_RNF130_5end | ||
|id=chr5:179498934..179498943,- | |id=chr5:179498934..179498943,- | ||
|ontology_enrichment_celltype=CL:0000763!7.04e-18!112;CL:0000049!7.04e-18!112;CL:0000766!3.25e-15!76;CL:0000839!3.31e-15!70;CL:0000557!7.69e-15!71;CL:0000037!2.45e-13!172;CL:0000566!2.45e-13!172;CL:0002194!6.18e-13!63;CL:0000576!6.18e-13!63;CL:0000040!6.18e-13!63;CL:0000559!6.18e-13!63;CL:0000988!7.13e-13!182;CL:0002009!2.97e-12!65;CL:0002032!1.36e-11!165;CL:0000837!1.36e-11!165;CL:0002057!2.00e-09!42;CL:0000738!3.00e-09!140;CL:0000860!2.14e-08!45;CL:0002031!1.87e-07!124;CL:0002087!2.40e-07!119 | |ontology_enrichment_celltype=CL:0000763!7.04e-18!112;CL:0000049!7.04e-18!112;CL:0000766!3.25e-15!76;CL:0000839!3.31e-15!70;CL:0000557!7.69e-15!71;CL:0000037!2.45e-13!172;CL:0000566!2.45e-13!172;CL:0002194!6.18e-13!63;CL:0000576!6.18e-13!63;CL:0000040!6.18e-13!63;CL:0000559!6.18e-13!63;CL:0000988!7.13e-13!182;CL:0002009!2.97e-12!65;CL:0002032!1.36e-11!165;CL:0000837!1.36e-11!165;CL:0002057!2.00e-09!42;CL:0000738!3.00e-09!140;CL:0000860!2.14e-08!45;CL:0002031!1.87e-07!124;CL:0002087!2.40e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.53e-25;6!CL:0000037;4.44e-18;1!CL:0001024;4.44e-18;1!CL:0000097;2.58e-14;5!CL:0000163;2.29e-08;9!CL:0000784;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.24e-25,6;CL:0001024,3.75e-18,1;CL:0000097,2.41e-14,5;CL:0002028,2.41e-14,5;CL:0000839,1.17e-11,66;CL:0000557,1.77e-11,67;CL:0000766,1.15e-10,72;CL:0000763,4.18e-09,108;CL:0000049,4.18e-09,108;CL:0000037,5.82e-09,168;CL:0000988,1.84e-08,177;CL:0000163,2.20e-08,9;CL:0002031,3.79e-08,120;CL:0002032,1.60e-07,161;CL:0000837,1.60e-07,161;CL:0000738,4.05e-07,136;CL:0002194,7.36e-07,59;CL:0000576,7.36e-07,59;CL:0000040,7.36e-07,59;CL:0000559,7.36e-07,59;CL:0000784,9.64e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.09e-15!102;UBERON:0003061!7.09e-15!102;UBERON:0002371!4.64e-14!80;UBERON:0001474!2.57e-13!86;UBERON:0002193!3.28e-13!112;UBERON:0002405!5.10e-13!115;UBERON:0004765!9.79e-13!101;UBERON:0001434!9.79e-13!101 | |ontology_enrichment_uberon=UBERON:0002390!7.09e-15!102;UBERON:0003061!7.09e-15!102;UBERON:0002371!4.64e-14!80;UBERON:0001474!2.57e-13!86;UBERON:0002193!3.28e-13!112;UBERON:0002405!5.10e-13!115;UBERON:0004765!9.79e-13!101;UBERON:0001434!9.79e-13!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.03e-17;1!UBERON:0005208;1.03e-17;1!UBERON:0004145;1.03e-17;1!UBERON:0005946;1.03e-17;1!UBERON:0005965;1.03e-17;1!UBERON:0002078;1.03e-17;1!UBERON:0002081;1.57e-09;2!UBERON:0002133;1.57e-09;2!UBERON:0003978;9.11e-07;3!UBERON:0004151;9.11e-07;3!UBERON:0000946;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,6.23e-18,1;UBERON:0005208,6.23e-18,1;UBERON:0005946,6.23e-18,1;UBERON:0005965,6.23e-18,1;UBERON:0002078,6.23e-18,1;UBERON:0002371,3.66e-13,76;UBERON:0001474,3.59e-12,82;UBERON:0004765,4.74e-11,90;UBERON:0002405,1.12e-10,93;UBERON:0002390,4.14e-10,98;UBERON:0003061,4.14e-10,98;UBERON:0001434,6.75e-10,100;UBERON:0002081,1.22e-09,2;UBERON:0002133,1.22e-09,2;UBERON:0010227,1.22e-09,2;UBERON:0002193,3.99e-09,108;UBERON:0003978,7.70e-07,3;UBERON:0009751,7.70e-07,3;UBERON:0004151,7.70e-07,3;UBERON:0000946,7.70e-07,3;UBERON:0002523,7.70e-07,3;UBERON:0005983,7.70e-07,3;UBERON:0004145,7.70e-07,3;UBERON:0002165,7.70e-07,3;UBERON:0002062,7.70e-07,3;UBERON:0007280,7.70e-07,3 | |||
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| ||
|short_description=p11@RNF130 | |short_description=p11@RNF130 | ||
}} | }} |
Latest revision as of 10:12, 17 September 2015
Short description: | p11@RNF130 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RNF130_5end |
Coexpression cluster: | NA |
Association with transcript: | 157bp_to_ENST00000261947_5end |
EntrezGene: | RNF130 |
HGNC: | 18280 |
UniProt: | Q86XS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.24e-25 | 6 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.75e-18 | 1 |
mast cell | 2.41e-14 | 5 |
basophil mast progenitor cell | 2.41e-14 | 5 |
myeloid lineage restricted progenitor cell | 1.17e-11 | 66 |
granulocyte monocyte progenitor cell | 1.77e-11 | 67 |
myeloid leukocyte | 1.15e-10 | 72 |
myeloid cell | 4.18e-09 | 108 |
common myeloid progenitor | 4.18e-09 | 108 |
hematopoietic stem cell | 5.82e-09 | 168 |
hematopoietic cell | 1.84e-08 | 177 |
endocrine cell | 2.20e-08 | 9 |
hematopoietic lineage restricted progenitor cell | 3.79e-08 | 120 |
hematopoietic oligopotent progenitor cell | 1.60e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-07 | 161 |
leukocyte | 4.05e-07 | 136 |
monopoietic cell | 7.36e-07 | 59 |
monocyte | 7.36e-07 | 59 |
monoblast | 7.36e-07 | 59 |
promonocyte | 7.36e-07 | 59 |
plasmacytoid dendritic cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 6.23e-18 | 1 |
right atrium valve | 6.23e-18 | 1 |
outflow tract of atrium | 6.23e-18 | 1 |
outflow part of right atrium | 6.23e-18 | 1 |
right cardiac atrium | 6.23e-18 | 1 |
bone marrow | 3.66e-13 | 76 |
bone element | 3.59e-12 | 82 |
skeletal element | 4.74e-11 | 90 |
immune system | 1.12e-10 | 93 |
hematopoietic system | 4.14e-10 | 98 |
blood island | 4.14e-10 | 98 |
skeletal system | 6.75e-10 | 100 |
cardiac atrium | 1.22e-09 | 2 |
atrioventricular valve | 1.22e-09 | 2 |
future cardiac atrium | 1.22e-09 | 2 |
hemolymphoid system | 3.99e-09 | 108 |
valve | 7.70e-07 | 3 |
cardiac mesenchyme | 7.70e-07 | 3 |
cardiac chamber | 7.70e-07 | 3 |
cardial valve | 7.70e-07 | 3 |
tunica intima | 7.70e-07 | 3 |
heart layer | 7.70e-07 | 3 |
outflow tract | 7.70e-07 | 3 |
endocardium | 7.70e-07 | 3 |
endocardial cushion | 7.70e-07 | 3 |
presumptive endocardium | 7.70e-07 | 3 |