FFCP PHASE1:Hg19::chr16:3096600..3096619,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:3096600..3096619,+
|short_description=p2@MMP25
|description=CAGE_peak_2_at_MMP25_5end
|association_with_transcript=-62bp_to_ENST00000336577,NM_022468,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64386 | |EntrezGene=64386 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14246 | |HGNC=14246 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPA2 | |UniProt=Q9NPA2 | ||
|association_with_transcript=-62bp_to_ENST00000336577,NM_022468,uc002cth.2_5end | |||
|cluster_id=chr16:3096600..3096619,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_MMP25_5end | |||
|id=chr16:3096600..3096619,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.02e-31!76;CL:0000763!5.97e-26!112;CL:0000049!5.97e-26!112;CL:0000839!1.11e-24!70;CL:0000557!5.79e-23!71;CL:0002057!7.75e-23!42;CL:0002194!9.23e-23!63;CL:0000576!9.23e-23!63;CL:0000040!9.23e-23!63;CL:0000559!9.23e-23!63;CL:0002009!9.65e-23!65;CL:0000860!1.62e-20!45;CL:0000738!3.38e-20!140;CL:0000037!4.57e-17!172;CL:0000566!4.57e-17!172;CL:0002032!2.98e-16!165;CL:0000837!2.98e-16!165;CL:0000988!6.57e-15!182;CL:0002031!4.89e-13!124;CL:0002087!1.18e-12!119;CL:0000094!1.98e-10!8;CL:0000990!4.08e-08!8;CL:0000081!5.77e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.19e-14;8!CL:0000990;1.60e-11;8!CL:0000775;7.40e-11;3!CL:0000081;2.04e-10;11!CL:0000860;3.09e-10;33!CL:0002057;3.09e-10;33!CL:0000451;2.72e-09;10!CL:0000576;3.58e-09;48!CL:0000473;4.53e-08;39!CL:0000234;4.53e-08;39!CL:0000771;1.01e-07;2!CL:0000766;3.12e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.45e-20,72;CL:0000763,2.96e-16,108;CL:0000049,2.96e-16,108;CL:0000094,1.22e-14,8;CL:0002194,1.61e-13,59;CL:0000576,1.61e-13,59;CL:0000040,1.61e-13,59;CL:0000559,1.61e-13,59;CL:0000738,1.71e-13,136;CL:0002009,6.32e-13,61;CL:0000990,1.23e-11,8;CL:0000839,1.34e-11,66;CL:0000557,2.33e-11,67;CL:0000860,2.33e-11,42;CL:0002057,2.33e-11,42;CL:0000775,7.43e-11,3;CL:0000081,2.08e-10,11;CL:0000037,2.91e-10,168;CL:0000473,1.63e-09,48;CL:0000234,1.63e-09,48;CL:0000451,2.20e-09,10;CL:0000988,2.39e-09,177;CL:0002032,2.59e-09,161;CL:0000837,2.59e-09,161;CL:0000771,1.01e-07,2;CL:0002087,5.30e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.20e-29!102;UBERON:0003061!2.20e-29!102;UBERON:0002193!2.61e-27!112;UBERON:0002371!1.22e-18!80;UBERON:0001474!2.70e-16!86;UBERON:0002405!9.03e-14!115;UBERON:0004765!4.76e-13!101;UBERON:0001434!4.76e-13!101;UBERON:0000178!1.83e-11!15;UBERON:0000179!1.83e-11!15;UBERON:0000463!1.83e-11!15;UBERON:0007023!6.11e-11!115;UBERON:0003081!6.61e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.71e-23;15!UBERON:0000179;3.71e-23;15!UBERON:0000463;3.71e-23;15!UBERON:0002390;1.01e-12;32!UBERON:0002193;2.40e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.59e-23,108;UBERON:0002390,2.36e-23,98;UBERON:0003061,2.36e-23,98;UBERON:0000178,3.70e-23,15;UBERON:0000179,3.70e-23,15;UBERON:0000463,3.70e-23,15;UBERON:0002405,5.05e-11,93;UBERON:0002371,1.75e-09,76;UBERON:0003081,1.69e-08,203;UBERON:0001474,1.82e-08,82;UBERON:0004765,2.48e-07,90 | |||
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| ||
|short_description=p2@MMP25 | |||
}} | }} |
Latest revision as of 10:11, 16 September 2015
Short description: | p2@MMP25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MMP25_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -62bp_to_ENST00000336577, NM_022468, uc002cth.2_5end |
EntrezGene: | MMP25 |
HGNC: | 14246 |
UniProt: | Q9NPA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.45e-20 | 72 |
myeloid cell | 2.96e-16 | 108 |
common myeloid progenitor | 2.96e-16 | 108 |
granulocyte | 1.22e-14 | 8 |
monopoietic cell | 1.61e-13 | 59 |
monocyte | 1.61e-13 | 59 |
monoblast | 1.61e-13 | 59 |
promonocyte | 1.61e-13 | 59 |
leukocyte | 1.71e-13 | 136 |
macrophage dendritic cell progenitor | 6.32e-13 | 61 |
conventional dendritic cell | 1.23e-11 | 8 |
myeloid lineage restricted progenitor cell | 1.34e-11 | 66 |
granulocyte monocyte progenitor cell | 2.33e-11 | 67 |
classical monocyte | 2.33e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.33e-11 | 42 |
neutrophil | 7.43e-11 | 3 |
blood cell | 2.08e-10 | 11 |
hematopoietic stem cell | 2.91e-10 | 168 |
defensive cell | 1.63e-09 | 48 |
phagocyte | 1.63e-09 | 48 |
dendritic cell | 2.20e-09 | 10 |
hematopoietic cell | 2.39e-09 | 177 |
hematopoietic oligopotent progenitor cell | 2.59e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.59e-09 | 161 |
eosinophil | 1.01e-07 | 2 |
nongranular leukocyte | 5.30e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.59e-23 | 108 |
hematopoietic system | 2.36e-23 | 98 |
blood island | 2.36e-23 | 98 |
blood | 3.70e-23 | 15 |
haemolymphatic fluid | 3.70e-23 | 15 |
organism substance | 3.70e-23 | 15 |
immune system | 5.05e-11 | 93 |
bone marrow | 1.75e-09 | 76 |
lateral plate mesoderm | 1.69e-08 | 203 |
bone element | 1.82e-08 | 82 |
skeletal element | 2.48e-07 | 90 |