FFCP PHASE1:Hg19::chr16:65155979..65156001,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:65155979..65156001,-
|short_description=p2@CDH11
|description=CAGE_peak_2_at_CDH11_5end
|association_with_transcript=0bp_to_ENST00000538390_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1009 | |EntrezGene=1009 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1750 | |HGNC=1750 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2W2 | |UniProt=F5H2W2 | ||
|association_with_transcript=0bp_to_ENST00000538390_5end | |||
|cluster_id=chr16:65155979..65156001,- | |||
|coexpression_cluster_id=C3580 | |||
|description=CAGE_peak_2_at_CDH11_5end | |||
|id=chr16:65155979..65156001,- | |||
|ontology_enrichment_celltype=CL:0000055!9.80e-39!180;CL:0000057!7.63e-22!75;CL:0000680!1.41e-16!57;CL:0000056!1.41e-16!57;CL:0000355!1.41e-16!57;CL:0000187!3.02e-16!54;CL:0000183!7.99e-16!59;CL:0000393!1.90e-15!60;CL:0000211!1.90e-15!60;CL:0000192!1.31e-13!42;CL:0000514!1.31e-13!42;CL:0000222!4.93e-13!119;CL:0000359!3.03e-12!32;CL:0000220!1.03e-07!246;CL:0002321!1.33e-07!248;CL:0002334!1.46e-07!12;CL:0002494!1.56e-07!16;CL:0002620!2.52e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.90e-12;32!CL:0000192;1.29e-10;43!CL:0000187;2.21e-09;55!CL:0000057;2.28e-09;73!CL:0000393;3.63e-08;61!CL:0000211;3.63e-08;61!CL:0002334;9.48e-08;12!CL:0002494;1.06e-07;16!CL:0002620;1.53e-07;23!CL:0000134;2.80e-07;55!CL:0002320;8.72e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.07e-23,76;CL:0000680,2.42e-17,58;CL:0000056,2.42e-17,58;CL:0000355,2.42e-17,58;CL:0000187,5.31e-17,55;CL:0000393,1.41e-15,61;CL:0000211,1.41e-15,61;CL:0000192,2.78e-14,43;CL:0000514,2.78e-14,43;CL:0000359,1.48e-12,32;CL:0000222,4.10e-12,121;CL:0002334,9.74e-08,12;CL:0002494,1.04e-07,16;CL:0002620,1.50e-07,23;CL:0002321,9.49e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.29e-10;43!CL:0000355;2.49e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.04e-20!365;UBERON:0000914!2.41e-19!83;UBERON:0002329!2.41e-19!83;UBERON:0003077!2.41e-19!83;UBERON:0003059!2.41e-19!83;UBERON:0007282!2.41e-19!83;UBERON:0009618!2.41e-19!83;UBERON:0007285!2.41e-19!83;UBERON:0004872!4.56e-17!84;UBERON:0004290!7.89e-17!70;UBERON:0001134!4.27e-16!61;UBERON:0002036!4.27e-16!61;UBERON:0003082!4.27e-16!61;UBERON:0002385!7.56e-16!63;UBERON:0001015!7.56e-16!63;UBERON:0000383!7.56e-16!63;UBERON:0000486!1.37e-14!82;UBERON:0001637!1.63e-14!42;UBERON:0003509!1.63e-14!42;UBERON:0004572!1.63e-14!42;UBERON:0000119!1.26e-13!312;UBERON:0000483!5.71e-13!309;UBERON:0002049!2.71e-12!79;UBERON:0007798!2.71e-12!79;UBERON:0001981!4.58e-12!60;UBERON:0007500!4.58e-12!60;UBERON:0004537!4.58e-12!60;UBERON:0006965!4.58e-12!60;UBERON:0004573!5.34e-12!33;UBERON:0004571!5.34e-12!33;UBERON:0000468!7.32e-12!659;UBERON:0000481!4.43e-11!347;UBERON:0000477!1.93e-10!286;UBERON:0005256!2.77e-10!143;UBERON:0000025!4.20e-10!194;UBERON:0004535!5.15e-10!110;UBERON:0001009!9.38e-10!113;UBERON:0002100!1.45e-09!216;UBERON:0000055!2.46e-09!69;UBERON:0004111!7.57e-09!241;UBERON:0003914!9.32e-09!118;UBERON:0000490!1.97e-08!138;UBERON:0000948!1.14e-07!24;UBERON:0005498!1.14e-07!24;UBERON:0004140!1.14e-07!24;UBERON:0009881!1.14e-07!24;UBERON:0004141!1.14e-07!24;UBERON:0003084!1.14e-07!24;UBERON:0007005!1.14e-07!24;UBERON:0004139!1.14e-07!24;UBERON:0004291!1.14e-07!24;UBERON:0000924!1.37e-07!173;UBERON:0006601!1.37e-07!173;UBERON:0002199!2.21e-07!45;UBERON:0002416!2.21e-07!45;UBERON:0000467!4.64e-07!625;UBERON:0007100!6.64e-07!27;UBERON:0000480!6.96e-07!626;UBERON:0003102!7.23e-07!95;UBERON:0000947!7.75e-07!21;UBERON:0010191!7.75e-07!21;UBERON:0004121!9.36e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.97e-11;33!UBERON:0004571;2.97e-11;33!UBERON:0001637;3.49e-11;42!UBERON:0003509;3.49e-11;42!UBERON:0004572;3.49e-11;42!UBERON:0000947;5.21e-07;21!UBERON:0010191;5.21e-07;21!UBERON:0002384;5.63e-07;198!UBERON:0000948;6.52e-07;22 | |||
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|phase1_expression=87.5689788084083,79.4312943635547,52.9988559400852,112.082094155506,84.0286857523301,158.765611386267,32.9289841618804,10.7392378482561,12.7980957817921,7.37201809504527,1.39560233594486,10.9220686065086,6.33040747748289,28.0949621219306,39.1048903358941,26.2206807116192,33.1481990413187,33.5942641578192,26.8363039334779,63.8998291418529,55.6921887096811,137.606622728881,18.8915751506497,12.5924471067053,17.5759695432724,0.229240217243854,0.328402357799783,0.236132343941038,0,0,2.47705797305722,11.0330546937471,18.9759728830298,3.69754010166788,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.694892620815,85.1790091823618,57.6660153914322,25.6621798193042,58.6565355443991,29.8383829059297,100.206029328439,45.2570429381451,42.4461329066665,31.4855744396841,21.5195224948159,9.82343066232845,1.45718115317017,0,0,0,0,0,0,0,10.7331699978021,18.0649264972286,22.9112731061012,48.6164830054648,52.0179300900283,12.105193845363,27.587335582859,0,0.71153252537342,1.33888245105868,0.402829317109147,0,0.488124115096339,2.57364156242108,16.2028389576352,3.21479021822687,8.53211615979445,3.82879033643296,1.53316637465883,9.49265659568129,3.66403487860815,0,0,3.05265836499774,119.273268406876,87.7549445835538,85.0066940820865,399.276576082349,78.7363808480353,92.5118040234807,72.5893170961994,69.8069162020563,122.928358982908,40.9520443091852,32.5289187195783,293.330694775877,274.259740052479,5.15507150034353,2.18512053781224,5.13424639390004,7.92078006924546,18.0849127911398,12.9498355494505,12.9214742166069,13.2700211315681,19.4078221352593,24.0749070139534,68.9041657223591,63.3003338953106,8.19145225744224,10.7792721272436,13.9718974581875,17.516592782075,8.03485934904131,86.4785913135251,63.136485934598,104.866165116805,41.8564755860478,103.507819792473,87.9856441932498,102.151176358909,129.039171316293,63.4803580108784,69.0476647322286,64.2103154343985,134.514736796289,90.4215407895923,70.6814567883521,92.3260483382262,101.99866185267,166.499498890292,67.6046579107466,55.6158742778399,10.8226077771446,12.5463215471784,8.60413786167011,1.82960559194393,2.25300606146525,9.41170937243099,8.08556229119889,2.77552935963191,1.45990943630332,54.7573363154356,66.2538166338672,31.7710319110705,91.4804818222999,48.3659252718622,0,0,0,0,0,0,0,0,0,0.738155454624648,26.6459370226547,25.9291627138782,20.5812195939759,0,0,2.36315962672562,0,0,21.1028406667186,13.4992851052609,2.24803506515239,0.402115889646523,0.277765335475589,5.86454949558584,7.27954349695705,23.0930147240437,27.0117843591929,55.299494985072,0.577465791044295,0,0.190254152234598,0,0.858486162094873,0,0,0,7.49870671894216,12.0947132303179,9.07360622351273,1.25381931783988,4.65014301622339,9.58456697913028,0,0,0.621984346622316,0.144119953416961,0.12624243342638,0.507983154337352,0,0,6.84289784090821,2.15937734676979,0,0,30.8360481949742,57.1107690171597,23.0282217477783,129.013172326262,7.15312891703765,13.524844040896,24.732244842393,35.3625285498645,13.3747834616314,4.25547396069835,11.7225758767084,17.3003372326359,72.7112951224534,18.9345277459577,9.77208552881205,11.0171504110189,25.3424599338697,149.513931021555,113.299349618038,118.368021559556,0,0,0,50.3212196532324,68.9171615004683,57.0547620162874,14.4781306667579,15.4107241912788,25.2475958168253,0,0,0,0,2.54094624222463,33.8363620029816,23.9719531961086,16.9191427987692,21.0519788045544,0,0,0,71.1610651971011,46.0156879374903,32.2805378202685,54.4883657210715,48.1758269752337,36.5869602878728,51.5422225967938,177.257252739626,191.022303407027,37.2503056653018,107.604546962741,58.2606572591782,24.7618301234036,32.3071909813522,59.0206688954672,0,0,0,6.06255142892519,18.3078983461547,17.2362467197918,127.527413218851,162.976615631922,136.681465988907,61.2505133442251,139.184371746143,117.905924198264,92.0192011958944,47.3423759974153,102.985800681614,50.8367095725479,27.0012303175483,51.4811976577619,0.120859449591622,0,1.56537681191024,26.7517664223534,15.4777492805709,25.962634161966,0.902399225814824,3.85076685522074,6.27479815341484,2.92278449306521,4.22206515571503,0,0,10.795795805107,4.62681758070868,10.2959646266664,4.01351819083883,0.764628819135115,7.47968408035852,0.223874754722178,0,0,2.56450125116389,11.15249795379,3.57916234130733,13.0862084792607,11.0799052430196,9.90113999047056,14.9309039879005,5.85054221432869,46.5983396548063,33.3513978107821,5.08360436478326,14.4293454242562,12.8188012410613,17.2946594237921,23.9277544958477,15.170339680066,140.403520214905,7.10725136052206,26.3300392290195,38.2838137483752,5.36136238534415,12.5508298310267,94.1288917023614,34.1548262378694,137.382976758536,42.0521763950447,40.0169176354533,51.7054571299937,99.3286713989419,45.7754794312391,43.0276017617467,24.9725554040211,16.889254226548,41.0821428512564,53.1399424036314,47.881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| ||
|short_description=p2@CDH11 | |||
}} | }} |
Latest revision as of 07:46, 17 September 2015
Short description: | p2@CDH11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH11_5end |
Coexpression cluster: | C3580_Fibroblast_tenocyte_Osteoblast_Adipocyte_Preadipocyte_Mesothelial_Smooth |
Association with transcript: | 0bp_to_ENST00000538390_5end |
EntrezGene: | CDH11 |
HGNC: | 1750 |
UniProt: | F5H2W2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.07e-23 | 76 |
muscle precursor cell | 2.42e-17 | 58 |
myoblast | 2.42e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.42e-17 | 58 |
muscle cell | 5.31e-17 | 55 |
electrically responsive cell | 1.41e-15 | 61 |
electrically active cell | 1.41e-15 | 61 |
smooth muscle cell | 2.78e-14 | 43 |
smooth muscle myoblast | 2.78e-14 | 43 |
vascular associated smooth muscle cell | 1.48e-12 | 32 |
mesodermal cell | 4.10e-12 | 121 |
preadipocyte | 9.74e-08 | 12 |
cardiocyte | 1.04e-07 | 16 |
skin fibroblast | 1.50e-07 | 23 |
embryonic cell | 9.49e-07 | 250 |