FFCP PHASE1:Hg19::chr7:641637..641649,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:641637..641649,+ | |||
|coexpression_cluster_id=C646 | |||
|description=CAGE_peak_at_chr7:641637..641649,+ | |description=CAGE_peak_at_chr7:641637..641649,+ | ||
|id=chr7:641637..641649,+ | |id=chr7:641637..641649,+ | ||
|ontology_enrichment_celltype=CL:0000557!1.92e-40!71;CL:0002057!3.79e-38!42;CL:0000839!1.70e-37!70;CL:0000988!6.42e-37!182;CL:0000766!9.48e-37!76;CL:0002009!3.21e-35!65;CL:0000763!6.03e-35!112;CL:0000049!6.03e-35!112;CL:0002032!7.91e-35!165;CL:0000837!7.91e-35!165;CL:0000860!9.95e-35!45;CL:0002031!4.99e-34!124;CL:0000037!1.84e-33!172;CL:0000566!1.84e-33!172;CL:0002194!4.14e-33!63;CL:0000576!4.14e-33!63;CL:0000040!4.14e-33!63;CL:0000559!4.14e-33!63;CL:0000738!1.25e-32!140;CL:0002087!4.23e-29!119;CL:0002320!9.00e-11!365;CL:0000134!2.01e-10!358;CL:0000219!3.05e-09!390;CL:0002274!3.96e-08!5;CL:0000457!3.96e-08!5;CL:0002191!3.96e-08!5;CL:0000097!3.96e-08!5;CL:0000831!3.96e-08!5;CL:0002028!3.96e-08!5;CL:0000048!2.81e-07!430;CL:0000723!7.23e-07!436;CL:0000034!9.49e-07!444 | |ontology_enrichment_celltype=CL:0000557!1.92e-40!71;CL:0002057!3.79e-38!42;CL:0000839!1.70e-37!70;CL:0000988!6.42e-37!182;CL:0000766!9.48e-37!76;CL:0002009!3.21e-35!65;CL:0000763!6.03e-35!112;CL:0000049!6.03e-35!112;CL:0002032!7.91e-35!165;CL:0000837!7.91e-35!165;CL:0000860!9.95e-35!45;CL:0002031!4.99e-34!124;CL:0000037!1.84e-33!172;CL:0000566!1.84e-33!172;CL:0002194!4.14e-33!63;CL:0000576!4.14e-33!63;CL:0000040!4.14e-33!63;CL:0000559!4.14e-33!63;CL:0000738!1.25e-32!140;CL:0002087!4.23e-29!119;CL:0002320!9.00e-11!365;CL:0000134!2.01e-10!358;CL:0000219!3.05e-09!390;CL:0002274!3.96e-08!5;CL:0000457!3.96e-08!5;CL:0002191!3.96e-08!5;CL:0000097!3.96e-08!5;CL:0000831!3.96e-08!5;CL:0002028!3.96e-08!5;CL:0000048!2.81e-07!430;CL:0000723!7.23e-07!436;CL:0000034!9.49e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.95e-87;33!CL:0002057;8.95e-87;33!CL:0000473;3.32e-62;39!CL:0000234;3.32e-62;39!CL:0000576;1.64e-38;48!CL:0000766;8.41e-28;69!CL:0000763;2.36e-13;100!CL:0002087;2.36e-11;104!CL:0000097;3.81e-09;5!CL:0000738;2.99e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.28e-71,42;CL:0002057,1.28e-71,42;CL:0000473,1.03e-66,48;CL:0000234,1.03e-66,48;CL:0000557,1.20e-60,67;CL:0000839,1.18e-57,66;CL:0000766,6.90e-56,72;CL:0002009,5.07e-54,61;CL:0002194,4.83e-52,59;CL:0000576,4.83e-52,59;CL:0000040,4.83e-52,59;CL:0000559,4.83e-52,59;CL:0002031,8.42e-38,120;CL:0000763,1.71e-37,108;CL:0000049,1.71e-37,108;CL:0000738,8.17e-37,136;CL:0002087,3.96e-32,115;CL:0002032,6.81e-30,161;CL:0000837,6.81e-30,161;CL:0000037,2.54e-28,168;CL:0000988,1.76e-26,177;CL:0000134,4.86e-10,354;CL:0002320,1.10e-09,361;CL:0000219,3.39e-09,386;CL:0000097,3.71e-09,5;CL:0002028,3.71e-09,5;CL:0000034,1.83e-08,441;CL:0000048,2.71e-08,427;CL:0000723,4.63e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.92e-52;42!CL:0000049;1.32e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.19e-37!80;UBERON:0002193!1.40e-33!112;UBERON:0001474!3.32e-33!86;UBERON:0002390!7.83e-33!102;UBERON:0003061!7.83e-33!102;UBERON:0002405!2.75e-27!115;UBERON:0004765!7.61e-27!101;UBERON:0001434!7.61e-27!101;UBERON:0003081!2.02e-12!216;UBERON:0002204!7.27e-12!167;UBERON:0002384!2.73e-10!375 | |ontology_enrichment_uberon=UBERON:0002371!5.19e-37!80;UBERON:0002193!1.40e-33!112;UBERON:0001474!3.32e-33!86;UBERON:0002390!7.83e-33!102;UBERON:0003061!7.83e-33!102;UBERON:0002405!2.75e-27!115;UBERON:0004765!7.61e-27!101;UBERON:0001434!7.61e-27!101;UBERON:0003081!2.02e-12!216;UBERON:0002204!7.27e-12!167;UBERON:0002384!2.73e-10!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.06e-52,76;UBERON:0001474,2.33e-48,82;UBERON:0002405,1.15e-47,93;UBERON:0004765,1.84e-43,90;UBERON:0002193,4.68e-40,108;UBERON:0002390,2.35e-39,98;UBERON:0003061,2.35e-39,98;UBERON:0001434,1.98e-38,100;UBERON:0002204,3.58e-20,167;UBERON:0003081,1.36e-16,203;UBERON:0002384,3.31e-09,371;UBERON:0000926,4.18e-08,315;UBERON:0004120,4.18e-08,315;UBERON:0006603,4.18e-08,315 | |||
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| ||
|short_description=p@chr7:641637..641649,+ | |short_description=p@chr7:641637..641649,+ | ||
}} | }} |
Latest revision as of 11:04, 31 July 2015
Short description: | p@chr7:641637..641649, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:641637..641649, + |
Coexpression cluster: | C646_CD14_Mast_vagina_thymus_MCF7_immature_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.28e-71 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-71 | 42 |
defensive cell | 1.03e-66 | 48 |
phagocyte | 1.03e-66 | 48 |
granulocyte monocyte progenitor cell | 1.20e-60 | 67 |
myeloid lineage restricted progenitor cell | 1.18e-57 | 66 |
myeloid leukocyte | 6.90e-56 | 72 |
macrophage dendritic cell progenitor | 5.07e-54 | 61 |
monopoietic cell | 4.83e-52 | 59 |
monocyte | 4.83e-52 | 59 |
monoblast | 4.83e-52 | 59 |
promonocyte | 4.83e-52 | 59 |
hematopoietic lineage restricted progenitor cell | 8.42e-38 | 120 |
myeloid cell | 1.71e-37 | 108 |
common myeloid progenitor | 1.71e-37 | 108 |
leukocyte | 8.17e-37 | 136 |
nongranular leukocyte | 3.96e-32 | 115 |
hematopoietic oligopotent progenitor cell | 6.81e-30 | 161 |
hematopoietic multipotent progenitor cell | 6.81e-30 | 161 |
hematopoietic stem cell | 2.54e-28 | 168 |
hematopoietic cell | 1.76e-26 | 177 |
mesenchymal cell | 4.86e-10 | 354 |
connective tissue cell | 1.10e-09 | 361 |
motile cell | 3.39e-09 | 386 |
mast cell | 3.71e-09 | 5 |
basophil mast progenitor cell | 3.71e-09 | 5 |
stem cell | 1.83e-08 | 441 |
multi fate stem cell | 2.71e-08 | 427 |
somatic stem cell | 4.63e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.06e-52 | 76 |
bone element | 2.33e-48 | 82 |
immune system | 1.15e-47 | 93 |
skeletal element | 1.84e-43 | 90 |
hemolymphoid system | 4.68e-40 | 108 |
hematopoietic system | 2.35e-39 | 98 |
blood island | 2.35e-39 | 98 |
skeletal system | 1.98e-38 | 100 |
musculoskeletal system | 3.58e-20 | 167 |
lateral plate mesoderm | 1.36e-16 | 203 |
connective tissue | 3.31e-09 | 371 |
mesoderm | 4.18e-08 | 315 |
mesoderm-derived structure | 4.18e-08 | 315 |
presumptive mesoderm | 4.18e-08 | 315 |