FFCP PHASE1:Hg19::chr8:22844791..22844808,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23221 | |EntrezGene=23221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18756 | |HGNC=18756 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBU2,A8K9Z8,Q9BYZ6 | |UniProt=E9PBU2,A8K9Z8,Q9BYZ6 | ||
|association_with_transcript=-121bp_to_ENST00000519685,NM_001160036,uc003xcp.2_5end | |association_with_transcript=-121bp_to_ENST00000519685,NM_001160036,uc003xcp.2_5end | ||
|cluster_id=chr8:22844791..22844808,+ | |||
|description=CAGE_peak_16_at_RHOBTB2_5end | |description=CAGE_peak_16_at_RHOBTB2_5end | ||
|id=chr8:22844791..22844808,+ | |id=chr8:22844791..22844808,+ | ||
|ontology_enrichment_celltype=CL:0002368!5.01e-19!13;CL:0002076!2.34e-17!43;CL:0000066!1.35e-15!254;CL:0000223!2.44e-14!59;CL:0002202!7.23e-11!9;CL:0002632!7.23e-11!9;CL:0002327!7.62e-11!4;CL:0002159!4.20e-10!13;CL:0002328!1.69e-09!3;CL:0002150!3.78e-09!3;CL:0000861!3.78e-09!3;CL:0002231!1.75e-08!3;CL:0000317!3.25e-07!2;CL:1000448!3.25e-07!2;CL:0002308!3.25e-07!2;CL:0002140!3.25e-07!2;CL:0000575!4.87e-07!2 | |ontology_enrichment_celltype=CL:0002368!5.01e-19!13;CL:0002076!2.34e-17!43;CL:0000066!1.35e-15!254;CL:0000223!2.44e-14!59;CL:0002202!7.23e-11!9;CL:0002632!7.23e-11!9;CL:0002327!7.62e-11!4;CL:0002159!4.20e-10!13;CL:0002328!1.69e-09!3;CL:0002150!3.78e-09!3;CL:0000861!3.78e-09!3;CL:0002231!1.75e-08!3;CL:0000317!3.25e-07!2;CL:1000448!3.25e-07!2;CL:0002308!3.25e-07!2;CL:0002140!3.25e-07!2;CL:0000575!4.87e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000317;5.15e-50;2!CL:1000448;5.15e-50;2!CL:0002308;5.15e-50;2!CL:0002140;5.15e-50;2!CL:0002159;1.98e-28;14!CL:0000362;3.04e-25;9!CL:0000622;9.93e-21;5!CL:0000154;1.85e-17;6!CL:1000415;1.07e-13;2!CL:0000575;1.46e-13;2!CL:0000150;5.52e-12;9!CL:0002077;2.31e-11;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,4.00e-50,2;CL:1000448,4.00e-50,2;CL:0002308,4.00e-50,2;CL:0002140,4.00e-50,2;CL:0002159,1.84e-28,14;CL:0000362,2.92e-25,9;CL:0000622,8.98e-21,5;CL:0000154,1.71e-17,6;CL:1000415,1.21e-13,2;CL:0000575,1.37e-13,2;CL:0002077,4.89e-12,34;CL:0000150,5.22e-12,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.43e-13!169;UBERON:0000925!2.43e-13!169;UBERON:0006595!2.43e-13!169;UBERON:0005153!1.09e-12!37;UBERON:0005157!1.33e-12!51;UBERON:0001911!7.62e-11!4;UBERON:0005333!7.62e-11!4;UBERON:0008425!7.62e-11!4;UBERON:0005311!7.62e-11!4;UBERON:0000065!2.71e-10!53;UBERON:0003101!5.19e-10!22;UBERON:0000079!5.19e-10!22;UBERON:0001004!1.14e-09!72;UBERON:0004815!1.69e-09!3;UBERON:0002031!1.69e-09!3;UBERON:0008947!4.33e-09!38;UBERON:0003258!4.33e-09!38;UBERON:0001048!5.93e-09!168;UBERON:0006947!6.17e-09!3;UBERON:0004054!6.17e-09!3;UBERON:0001007!6.33e-09!155;UBERON:0001555!6.33e-09!155;UBERON:0007026!6.33e-09!155;UBERON:0007196!6.34e-09!14;UBERON:0001558!6.34e-09!14;UBERON:0000464!8.92e-09!104;UBERON:0000077!9.19e-09!130;UBERON:0004921!1.53e-08!129;UBERON:0004185!1.53e-08!129;UBERON:0003135!2.85e-08!11;UBERON:0005178!1.20e-07!34;UBERON:0002224!1.20e-07!34;UBERON:0005181!2.32e-07!35;UBERON:0000485!2.39e-07!9;UBERON:0002419!3.25e-07!2;UBERON:0007771!3.25e-07!2;UBERON:0003297!3.25e-07!2;UBERON:0001821!3.25e-07!2;UBERON:0003487!3.25e-07!2;UBERON:0001820!3.25e-07!2;UBERON:0005089!3.25e-07!2;UBERON:0005088!3.25e-07!2;UBERON:0002185!3.37e-07!4;UBERON:0005904!8.74e-07!4 | |ontology_enrichment_uberon=UBERON:0004119!2.43e-13!169;UBERON:0000925!2.43e-13!169;UBERON:0006595!2.43e-13!169;UBERON:0005153!1.09e-12!37;UBERON:0005157!1.33e-12!51;UBERON:0001911!7.62e-11!4;UBERON:0005333!7.62e-11!4;UBERON:0008425!7.62e-11!4;UBERON:0005311!7.62e-11!4;UBERON:0000065!2.71e-10!53;UBERON:0003101!5.19e-10!22;UBERON:0000079!5.19e-10!22;UBERON:0001004!1.14e-09!72;UBERON:0004815!1.69e-09!3;UBERON:0002031!1.69e-09!3;UBERON:0008947!4.33e-09!38;UBERON:0003258!4.33e-09!38;UBERON:0001048!5.93e-09!168;UBERON:0006947!6.17e-09!3;UBERON:0004054!6.17e-09!3;UBERON:0001007!6.33e-09!155;UBERON:0001555!6.33e-09!155;UBERON:0007026!6.33e-09!155;UBERON:0007196!6.34e-09!14;UBERON:0001558!6.34e-09!14;UBERON:0000464!8.92e-09!104;UBERON:0000077!9.19e-09!130;UBERON:0004921!1.53e-08!129;UBERON:0004185!1.53e-08!129;UBERON:0003135!2.85e-08!11;UBERON:0005178!1.20e-07!34;UBERON:0002224!1.20e-07!34;UBERON:0005181!2.32e-07!35;UBERON:0000485!2.39e-07!9;UBERON:0002419!3.25e-07!2;UBERON:0007771!3.25e-07!2;UBERON:0003297!3.25e-07!2;UBERON:0001821!3.25e-07!2;UBERON:0003487!3.25e-07!2;UBERON:0001820!3.25e-07!2;UBERON:0005089!3.25e-07!2;UBERON:0005088!3.25e-07!2;UBERON:0002185!3.37e-07!4;UBERON:0005904!8.74e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;5.15e-50;2!UBERON:0007771;5.15e-50;2!UBERON:0003297;5.15e-50;2!UBERON:0001821;5.15e-50;2!UBERON:0003487;5.15e-50;2!UBERON:0001820;5.15e-50;2!UBERON:0001000;3.15e-26;1!UBERON:0005352;3.15e-26;1!UBERON:0001003;1.80e-15;15!UBERON:0007376;1.80e-15;15!UBERON:0006947;1.14e-09;3!UBERON:0004054;1.14e-09;3!UBERON:0002110;1.41e-09;3!UBERON:0010371;1.10e-07;31!UBERON:0005904;1.44e-07;4!UBERON:0000964;1.98e-07;4!UBERON:0010409;1.98e-07;4!UBERON:0003102;5.55e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,4.00e-50,2;UBERON:0007771,4.00e-50,2;UBERON:0003297,4.00e-50,2;UBERON:0001821,4.00e-50,2;UBERON:0003487,4.00e-50,2;UBERON:0001820,4.00e-50,2;UBERON:0005089,4.00e-50,2;UBERON:0005088,4.00e-50,2;UBERON:0001000,3.58e-26,1;UBERON:0005352,3.58e-26,1;UBERON:0001003,1.76e-15,15;UBERON:0007376,1.76e-15,15;UBERON:0007383,1.76e-15,15;UBERON:0006947,1.19e-09,3;UBERON:0004054,1.19e-09,3;UBERON:0002110,1.54e-09,3;UBERON:0006242,1.54e-09,3;UBERON:0005085,7.53e-08,31;UBERON:0005904,1.49e-07,4;UBERON:0000964,1.92e-07,4;UBERON:0010409,1.92e-07,4;UBERON:0004348,1.92e-07,4;UBERON:0005427,1.92e-07,4 | |||
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| ||
|short_description=p16@RHOBTB2 | |short_description=p16@RHOBTB2 | ||
}} | }} |
Latest revision as of 12:56, 17 September 2015
Short description: | p16@RHOBTB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_RHOBTB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -121bp_to_ENST00000519685, NM_001160036, uc003xcp.2_5end |
EntrezGene: | RHOBTB2 |
HGNC: | 18756 |
UniProt: | E9PBU2A8K9Z8Q9BYZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 4.00e-50 | 2 |
epithelial cell of sweat gland | 4.00e-50 | 2 |
epithelial cell of skin gland | 4.00e-50 | 2 |
acinar cell of sebaceous gland | 4.00e-50 | 2 |
general ecto-epithelial cell | 1.84e-28 | 14 |
epidermal cell | 2.92e-25 | 9 |
acinar cell | 8.98e-21 | 5 |
protein secreting cell | 1.71e-17 | 6 |
epithelial cell of gall bladder | 1.21e-13 | 2 |
corneal epithelial cell | 1.37e-13 | 2 |
ecto-epithelial cell | 4.89e-12 | 34 |
glandular epithelial cell | 5.22e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
skin gland | 4.00e-50 | 2 |
epidermis gland | 4.00e-50 | 2 |
gland of integumental system | 4.00e-50 | 2 |
sebaceous gland | 4.00e-50 | 2 |
skin sebaceous gland | 4.00e-50 | 2 |
sweat gland | 4.00e-50 | 2 |
sweat gland placode | 4.00e-50 | 2 |
sebaceous gland placode | 4.00e-50 | 2 |
vas deferens | 3.58e-26 | 1 |
spermatic cord | 3.58e-26 | 1 |
skin epidermis | 1.76e-15 | 15 |
outer epithelium | 1.76e-15 | 15 |
enveloping layer of ectoderm | 1.76e-15 | 15 |
male genital duct | 1.19e-09 | 3 |
internal male genitalia | 1.19e-09 | 3 |
gallbladder | 1.54e-09 | 3 |
gall bladder primordium | 1.54e-09 | 3 |
ectodermal placode | 7.53e-08 | 31 |
duct of male reproductive system | 1.49e-07 | 4 |
cornea | 1.92e-07 | 4 |
eye surface | 1.92e-07 | 4 |
optic eminence | 1.92e-07 | 4 |
corneal primordium | 1.92e-07 | 4 |