FFCP PHASE1:Hg19::chr16:84896300..84896303,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:84896300..84896303,+
|short_description=p@chr16:84896300..84896303,+
|description=CAGE_peak_at_chr16:84896300..84896303,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:84896300..84896303,+ | |||
|description=CAGE_peak_at_chr16:84896300..84896303,+ | |||
|id=chr16:84896300..84896303,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;4.10e-23;1!CL:0000775;8.31e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,6.40e-23,1;CL:0000775,8.31e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.34e-23;1!UBERON:0005425;1.87e-23;1!UBERON:0003056;1.00e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.90e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,2.32e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.47e-14!115;UBERON:0003978!4.85e-07!3;UBERON:0009751!4.85e-07!3;UBERON:0000946!4.85e-07!3;UBERON:0002523!4.85e-07!3;UBERON:0005983!4.85e-07!3;UBERON:0002165!4.85e-07!3;UBERON:0002062!4.85e-07!3;UBERON:0007280!4.85e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.87e-23;1!UBERON:0001785;1.87e-23;1!UBERON:0002464;1.87e-23;1!UBERON:0004904;1.87e-23;1!UBERON:0001021;1.87e-23;1!UBERON:0003714;1.96e-12;2!UBERON:0005162;1.96e-12;2!UBERON:0000122;1.96e-12;2!UBERON:0000078;2.90e-12;2!UBERON:0002012;2.90e-12;2!UBERON:0008886;2.90e-12;2!UBERON:0002110;8.96e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.67e-23,1;UBERON:0001785,1.67e-23,1;UBERON:0002464,1.67e-23,1;UBERON:0004904,1.67e-23,1;UBERON:0001021,1.67e-23,1;UBERON:0003902,1.67e-23,1;UBERON:0005425,1.67e-23,1;UBERON:0003714,1.85e-12,2;UBERON:0005162,1.85e-12,2;UBERON:0000122,1.85e-12,2;UBERON:0000078,3.62e-12,2;UBERON:0007497,3.62e-12,2;UBERON:0003643,3.62e-12,2;UBERON:0003504,3.62e-12,2;UBERON:0003469,3.62e-12,2;UBERON:0003496,3.62e-12,2;UBERON:0002012,3.62e-12,2;UBERON:0008886,3.62e-12,2;UBERON:0007303,3.62e-12,2;UBERON:0002061,3.62e-12,2;UBERON:0005432,3.62e-12,2;UBERON:0004363,3.62e-12,2;UBERON:0002110,8.96e-09,3;UBERON:0006242,8.96e-09,3;UBERON:0004145,1.51e-08,3;UBERON:0001781,7.27e-07,4 | |||
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| ||
|short_description=p@chr16:84896300..84896303,+ | |||
}} | }} |
Latest revision as of 12:56, 25 July 2015
Short description: | p@chr16:84896300..84896303, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:84896300..84896303, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 6.40e-23 | 1 |
neutrophil | 8.31e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.67e-23 | 1 |
cranial nerve | 1.67e-23 | 1 |
nerve trunk | 1.67e-23 | 1 |
nerve connecting eye with brain | 1.67e-23 | 1 |
nerve | 1.67e-23 | 1 |
retinal neural layer | 1.67e-23 | 1 |
presumptive neural retina | 1.67e-23 | 1 |
neural tissue | 1.85e-12 | 2 |
multi cell component structure | 1.85e-12 | 2 |
neuron projection bundle | 1.85e-12 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 3.62e-12 | 2 |
developing epithelial placode | 3.62e-12 | 2 |
respiratory system arterial blood vessel | 3.62e-12 | 2 |
respiratory system blood vessel | 3.62e-12 | 2 |
respiratory system artery | 3.62e-12 | 2 |
head blood vessel | 3.62e-12 | 2 |
pulmonary artery | 3.62e-12 | 2 |
pulmonary vascular system | 3.62e-12 | 2 |
pharyngeal vasculature | 3.62e-12 | 2 |
truncus arteriosus | 3.62e-12 | 2 |
aortic sac | 3.62e-12 | 2 |
pharyngeal arch artery | 3.62e-12 | 2 |
gallbladder | 8.96e-09 | 3 |
gall bladder primordium | 8.96e-09 | 3 |
outflow tract | 1.51e-08 | 3 |
layer of retina | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
teratoma | 2.32e-12 | 2 |