FFCP PHASE1:Hg19::chr9:37752895..37752902,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:37752895..37752902,+ | |||
|coexpression_cluster_id=C2711 | |||
|description=CAGE_peak_at_chr9:37752895..37752902,+ | |description=CAGE_peak_at_chr9:37752895..37752902,+ | ||
|id=chr9:37752895..37752902,+ | |id=chr9:37752895..37752902,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.50e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.40e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.13e-17;10!UBERON:0005564;8.13e-17;10 | |||
|ontology_enrichment_disease=DOID:2531!4.16e-08!51;DOID:0060083!4.16e-08!51;DOID:6193!8.81e-07!1 | |ontology_enrichment_disease=DOID:2531!4.16e-08!51;DOID:0060083!4.16e-08!51;DOID:6193!8.81e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:6193;2.70e-40;1!DOID:3910;4.21e-21;2!DOID:3350;6.30e-21;2!DOID:3908;2.86e-09;5!DOID:1325;5.54e-07;7!DOID:3904;5.54e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.21e-40,1;DOID:3910,3.81e-21,2;DOID:3350,5.70e-21,2;DOID:3908,2.74e-09,5;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.20e-10!8;UBERON:0003135!9.31e-08!11 | |ontology_enrichment_uberon=UBERON:0000473!1.20e-10!8;UBERON:0003135!9.31e-08!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;4.21e-21;2!UBERON:0002173;4.21e-21;2!UBERON:0002186;4.21e-21;2!UBERON:0000473;9.92e-21;8!UBERON:0003135;2.17e-15;11!UBERON:0004821;1.50e-14;3!UBERON:0007499;1.50e-14;3!UBERON:0003215;1.50e-14;3!UBERON:0010368;1.50e-14;3!UBERON:0009911;1.50e-14;3!UBERON:0002299;1.50e-14;3!UBERON:0006524;1.50e-14;3!UBERON:0008874;1.50e-14;3!UBERON:0002169;1.50e-14;3!UBERON:0004894;1.50e-14;3!UBERON:0009856;2.94e-11;4!UBERON:0000991;1.48e-08;21!UBERON:0003101;3.27e-08;22!UBERON:0000079;3.27e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.81e-21,2;UBERON:0002173,3.81e-21,2;UBERON:0002186,3.81e-21,2;UBERON:0000473,1.10e-20,8;UBERON:0003135,2.33e-15,11;UBERON:0004821,1.40e-14,3;UBERON:0003215,1.40e-14,3;UBERON:0010368,1.40e-14,3;UBERON:0009911,1.40e-14,3;UBERON:0002299,1.40e-14,3;UBERON:0006524,1.40e-14,3;UBERON:0008874,1.40e-14,3;UBERON:0002169,1.40e-14,3;UBERON:0004894,1.40e-14,3;UBERON:0000991,1.53e-08,21;UBERON:0009196,1.53e-08,21;UBERON:0009117,1.53e-08,21;UBERON:0005564,1.53e-08,21;UBERON:0004176,3.39e-08,22;UBERON:0003101,3.39e-08,22;UBERON:0000079,3.39e-08,22 | |||
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|short_description=p@chr9:37752895..37752902,+ | |short_description=p@chr9:37752895..37752902,+ | ||
}} | }} |
Latest revision as of 02:01, 1 August 2015
Short description: | p@chr9:37752895..37752902, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:37752895..37752902, + |
Coexpression cluster: | C2711_embryonic_epithelioid_bronchioalveolar_testis_small_Smooth_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.40e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.81e-21 | 2 |
alveolar duct | 3.81e-21 | 2 |
bronchiole | 3.81e-21 | 2 |
testis | 1.10e-20 | 8 |
male reproductive organ | 2.33e-15 | 11 |
pulmonary alveolus epithelium | 1.40e-14 | 3 |
alveolus | 1.40e-14 | 3 |
pulmonary lobule | 1.40e-14 | 3 |
lobule | 1.40e-14 | 3 |
alveolus of lung | 1.40e-14 | 3 |
alveolar system | 1.40e-14 | 3 |
pulmonary acinus | 1.40e-14 | 3 |
alveolar sac | 1.40e-14 | 3 |
alveolar wall | 1.40e-14 | 3 |
gonad | 1.53e-08 | 21 |
indifferent external genitalia | 1.53e-08 | 21 |
indifferent gonad | 1.53e-08 | 21 |
gonad primordium | 1.53e-08 | 21 |
external genitalia | 3.39e-08 | 22 |
male organism | 3.39e-08 | 22 |
male reproductive system | 3.39e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.21e-40 | 1 |
lung adenocarcinoma | 3.81e-21 | 2 |
mesenchymal cell neoplasm | 5.70e-21 | 2 |
non-small cell lung carcinoma | 2.74e-09 | 5 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |