FFCP PHASE1:Hg19::chr22:17565903..17565929,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23765 | |EntrezGene=23765 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5985 | |HGNC=5985 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000459971_5end | |association_with_transcript=-17bp_to_ENST00000459971_5end | ||
|cluster_id=chr22:17565903..17565929,+ | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_2_at_IL17RA_5end | |description=CAGE_peak_2_at_IL17RA_5end | ||
|id=chr22:17565903..17565929,+ | |id=chr22:17565903..17565929,+ | ||
|ontology_enrichment_celltype=CL:0000766!9.31e-28!76;CL:0000738!3.32e-27!140;CL:0002087!5.58e-25!119;CL:0002194!6.66e-25!63;CL:0000576!6.66e-25!63;CL:0000040!6.66e-25!63;CL:0000559!6.66e-25!63;CL:0002057!7.75e-25!42;CL:0002009!1.73e-24!65;CL:0000037!1.79e-24!172;CL:0000566!1.79e-24!172;CL:0000557!2.89e-23!71;CL:0000839!3.43e-22!70;CL:0002032!9.50e-22!165;CL:0000837!9.50e-22!165;CL:0002031!9.66e-22!124;CL:0000988!3.22e-21!182;CL:0000860!1.70e-20!45;CL:0000763!8.53e-20!112;CL:0000049!8.53e-20!112;CL:0000791!4.10e-08!18;CL:0000789!4.10e-08!18;CL:0002420!4.10e-08!18;CL:0002419!4.10e-08!18;CL:0000790!4.10e-08!18;CL:0000084!8.02e-07!25;CL:0000827!8.02e-07!25 | |ontology_enrichment_celltype=CL:0000766!9.31e-28!76;CL:0000738!3.32e-27!140;CL:0002087!5.58e-25!119;CL:0002194!6.66e-25!63;CL:0000576!6.66e-25!63;CL:0000040!6.66e-25!63;CL:0000559!6.66e-25!63;CL:0002057!7.75e-25!42;CL:0002009!1.73e-24!65;CL:0000037!1.79e-24!172;CL:0000566!1.79e-24!172;CL:0000557!2.89e-23!71;CL:0000839!3.43e-22!70;CL:0002032!9.50e-22!165;CL:0000837!9.50e-22!165;CL:0002031!9.66e-22!124;CL:0000988!3.22e-21!182;CL:0000860!1.70e-20!45;CL:0000763!8.53e-20!112;CL:0000049!8.53e-20!112;CL:0000791!4.10e-08!18;CL:0000789!4.10e-08!18;CL:0002420!4.10e-08!18;CL:0002419!4.10e-08!18;CL:0000790!4.10e-08!18;CL:0000084!8.02e-07!25;CL:0000827!8.02e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.54e-19;33!CL:0002057;5.54e-19;33!CL:0000473;1.03e-18;39!CL:0000234;1.03e-18;39!CL:0000576;6.00e-18;48!CL:0000766;7.63e-14;69!CL:0000791;3.04e-08;18!CL:0000789;3.04e-08;18!CL:0002419;3.04e-08;18!CL:0000763;3.99e-08;100!CL:0002087;8.10e-08;104!CL:0000084;4.10e-07;25!CL:0000738;4.33e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.92e-33,72;CL:0000738,1.65e-30,136;CL:0002194,3.49e-30,59;CL:0000576,3.49e-30,59;CL:0000040,3.49e-30,59;CL:0000559,3.49e-30,59;CL:0002009,1.34e-29,61;CL:0002087,1.11e-28,115;CL:0000473,3.27e-28,48;CL:0000234,3.27e-28,48;CL:0000557,6.40e-28,67;CL:0000037,1.02e-27,168;CL:0000839,9.68e-27,66;CL:0002031,4.80e-25,120;CL:0000860,4.88e-25,42;CL:0002057,4.88e-25,42;CL:0002032,7.97e-25,161;CL:0000837,7.97e-25,161;CL:0000988,8.44e-24,177;CL:0000763,3.15e-23,108;CL:0000049,3.15e-23,108;CL:0000791,3.60e-08,18;CL:0000789,3.60e-08,18;CL:0002420,3.60e-08,18;CL:0002419,3.60e-08,18;CL:0000790,3.60e-08,18;CL:0000134,3.49e-07,354;CL:0000084,5.91e-07,25;CL:0000827,5.91e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-18;42!CL:0000790;3.04e-08;18!CL:0000049;1.44e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.36e-25!216;UBERON:0002193!6.35e-25!112;UBERON:0002390!9.78e-25!102;UBERON:0003061!9.78e-25!102;UBERON:0002371!3.11e-18!80;UBERON:0001474!7.27e-16!86;UBERON:0002405!7.27e-15!115;UBERON:0004765!1.52e-11!101;UBERON:0001434!1.52e-11!101;UBERON:0007023!1.70e-10!115;UBERON:0001009!1.88e-08!113;UBERON:0004535!3.15e-08!110;UBERON:0002204!4.35e-08!167;UBERON:0004872!5.10e-07!84 | |ontology_enrichment_uberon=UBERON:0003081!4.36e-25!216;UBERON:0002193!6.35e-25!112;UBERON:0002390!9.78e-25!102;UBERON:0003061!9.78e-25!102;UBERON:0002371!3.11e-18!80;UBERON:0001474!7.27e-16!86;UBERON:0002405!7.27e-15!115;UBERON:0004765!1.52e-11!101;UBERON:0001434!1.52e-11!101;UBERON:0007023!1.70e-10!115;UBERON:0001009!1.88e-08!113;UBERON:0004535!3.15e-08!110;UBERON:0002204!4.35e-08!167;UBERON:0004872!5.10e-07!84 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.73e-30,203;UBERON:0002390,1.21e-28,98;UBERON:0003061,1.21e-28,98;UBERON:0002193,1.52e-28,108;UBERON:0002405,4.50e-24,93;UBERON:0002371,5.92e-22,76;UBERON:0001474,2.63e-19,82;UBERON:0004765,6.32e-16,90;UBERON:0001434,6.88e-13,100;UBERON:0000926,4.87e-12,315;UBERON:0004120,4.87e-12,315;UBERON:0006603,4.87e-12,315;UBERON:0007023,2.57e-10,114;UBERON:0001009,1.21e-08,112;UBERON:0002204,1.66e-08,167;UBERON:0004535,2.04e-08,109;UBERON:0004872,2.18e-07,83 | |||
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| ||
|short_description=p2@IL17RA | |short_description=p2@IL17RA | ||
}} | }} |
Latest revision as of 00:41, 19 September 2015
Short description: | p2@IL17RA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IL17RA_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | -17bp_to_ENST00000459971_5end |
EntrezGene: | IL17RA |
HGNC: | 5985 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.92e-33 | 72 |
leukocyte | 1.65e-30 | 136 |
monopoietic cell | 3.49e-30 | 59 |
monocyte | 3.49e-30 | 59 |
monoblast | 3.49e-30 | 59 |
promonocyte | 3.49e-30 | 59 |
macrophage dendritic cell progenitor | 1.34e-29 | 61 |
nongranular leukocyte | 1.11e-28 | 115 |
defensive cell | 3.27e-28 | 48 |
phagocyte | 3.27e-28 | 48 |
granulocyte monocyte progenitor cell | 6.40e-28 | 67 |
hematopoietic stem cell | 1.02e-27 | 168 |
myeloid lineage restricted progenitor cell | 9.68e-27 | 66 |
hematopoietic lineage restricted progenitor cell | 4.80e-25 | 120 |
classical monocyte | 4.88e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.88e-25 | 42 |
hematopoietic oligopotent progenitor cell | 7.97e-25 | 161 |
hematopoietic multipotent progenitor cell | 7.97e-25 | 161 |
hematopoietic cell | 8.44e-24 | 177 |
myeloid cell | 3.15e-23 | 108 |
common myeloid progenitor | 3.15e-23 | 108 |
mature alpha-beta T cell | 3.60e-08 | 18 |
alpha-beta T cell | 3.60e-08 | 18 |
immature T cell | 3.60e-08 | 18 |
mature T cell | 3.60e-08 | 18 |
immature alpha-beta T cell | 3.60e-08 | 18 |
mesenchymal cell | 3.49e-07 | 354 |
T cell | 5.91e-07 | 25 |
pro-T cell | 5.91e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.73e-30 | 203 |
hematopoietic system | 1.21e-28 | 98 |
blood island | 1.21e-28 | 98 |
hemolymphoid system | 1.52e-28 | 108 |
immune system | 4.50e-24 | 93 |
bone marrow | 5.92e-22 | 76 |
bone element | 2.63e-19 | 82 |
skeletal element | 6.32e-16 | 90 |
skeletal system | 6.88e-13 | 100 |
mesoderm | 4.87e-12 | 315 |
mesoderm-derived structure | 4.87e-12 | 315 |
presumptive mesoderm | 4.87e-12 | 315 |
adult organism | 2.57e-10 | 114 |
circulatory system | 1.21e-08 | 112 |
musculoskeletal system | 1.66e-08 | 167 |
cardiovascular system | 2.04e-08 | 109 |
splanchnic layer of lateral plate mesoderm | 2.18e-07 | 83 |