FFCP PHASE1:Hg19::chr10:73843883..73843895,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:73843883..73843895,- | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_at_chr10:73843883..73843895,- | |description=CAGE_peak_at_chr10:73843883..73843895,- | ||
|id=chr10:73843883..73843895,- | |id=chr10:73843883..73843895,- | ||
|ontology_enrichment_celltype=CL:0000623!4.52e-13!3;CL:0000825!4.52e-13!3;CL:0000542!1.07e-12!53;CL:0000051!1.07e-12!53;CL:0000084!1.97e-12!25;CL:0000827!1.97e-12!25;CL:0000838!4.39e-11!52;CL:0000791!7.93e-11!18;CL:0000789!7.93e-11!18;CL:0002420!7.93e-11!18;CL:0002419!7.93e-11!18;CL:0000790!7.93e-11!18 | |ontology_enrichment_celltype=CL:0000623!4.52e-13!3;CL:0000825!4.52e-13!3;CL:0000542!1.07e-12!53;CL:0000051!1.07e-12!53;CL:0000084!1.97e-12!25;CL:0000827!1.97e-12!25;CL:0000838!4.39e-11!52;CL:0000791!7.93e-11!18;CL:0000789!7.93e-11!18;CL:0002420!7.93e-11!18;CL:0002419!7.93e-11!18;CL:0000790!7.93e-11!18 | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.99e-50;1!CL:0000911;3.99e-50;1!CL:0000814;3.99e-50;1!CL:0000084;5.49e-09;25!CL:0000542;2.40e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.99e-50,1;CL:0000914,3.99e-50,1;CL:0000911,3.99e-50,1;CL:0000814,3.99e-50,1;CL:0002042,3.99e-50,1;CL:0002039,3.99e-50,1;CL:0002040,3.99e-50,1;CL:0002041,3.99e-50,1;CL:0000893,7.14e-26,2;CL:0002489,7.14e-26,2;CL:0000809,7.14e-26,2;CL:0000808,7.14e-26,2;CL:0000894,7.14e-26,2;CL:0000806,7.14e-26,2;CL:0000807,7.14e-26,2;CL:0000805,7.14e-26,2;CL:0002425,7.14e-26,2;CL:0000838,1.73e-09,52;CL:0000542,2.52e-09,53;CL:0000051,2.52e-09,53;CL:0000084,5.49e-09,25;CL:0000827,5.49e-09,25 | |||
|ontology_enrichment_development_v019=CL:0002425;7.14e-26;2!CL:0000051;2.40e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2531;2.58e-08;51!DOID:0060083;2.58e-08;51!DOID:1036;1.59e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.17e-09,51;DOID:0060083,1.17e-09,51;DOID:1036,1.59e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.10e-10!4;UBERON:0005058!1.10e-10!4;UBERON:0009113!1.10e-10!4;UBERON:0003295!1.10e-10!4;UBERON:0005562!1.10e-10!4;UBERON:0003408!2.78e-07!10;UBERON:0003351!3.02e-07!6 | |ontology_enrichment_uberon=UBERON:0002370!1.10e-10!4;UBERON:0005058!1.10e-10!4;UBERON:0009113!1.10e-10!4;UBERON:0003295!1.10e-10!4;UBERON:0005562!1.10e-10!4;UBERON:0003408!2.78e-07!10;UBERON:0003351!3.02e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.80e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.13e-13,4;UBERON:0005058,1.13e-13,4;UBERON:0009113,1.13e-13,4;UBERON:0003295,1.13e-13,4;UBERON:0005562,1.13e-13,4;UBERON:0003351,1.44e-09,6;UBERON:0004177,2.18e-08,7;UBERON:0005057,2.18e-08,7;UBERON:0000473,1.80e-07,8 | |||
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| ||
|short_description=p@chr10:73843883..73843895,- | |short_description=p@chr10:73843883..73843895,- | ||
}} | }} |
Latest revision as of 15:23, 23 July 2015
Short description: | p@chr10:73843883..73843895, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73843883..73843895, - |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.99e-50 | 1 |
immature NK T cell | 3.99e-50 | 1 |
effector T cell | 3.99e-50 | 1 |
mature NK T cell | 3.99e-50 | 1 |
immature NK T cell stage IV | 3.99e-50 | 1 |
immature NK T cell stage I | 3.99e-50 | 1 |
immature NK T cell stage II | 3.99e-50 | 1 |
immature NK T cell stage III | 3.99e-50 | 1 |
thymocyte | 7.14e-26 | 2 |
double negative thymocyte | 7.14e-26 | 2 |
double-positive, alpha-beta thymocyte | 7.14e-26 | 2 |
DN4 thymocyte | 7.14e-26 | 2 |
DN1 thymic pro-T cell | 7.14e-26 | 2 |
DN2 thymocyte | 7.14e-26 | 2 |
DN3 thymocyte | 7.14e-26 | 2 |
immature single positive thymocyte | 7.14e-26 | 2 |
early T lineage precursor | 7.14e-26 | 2 |
lymphoid lineage restricted progenitor cell | 1.73e-09 | 52 |
lymphocyte | 2.52e-09 | 53 |
common lymphoid progenitor | 2.52e-09 | 53 |
T cell | 5.49e-09 | 25 |
pro-T cell | 5.49e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.13e-13 | 4 |
hemolymphoid system gland | 1.13e-13 | 4 |
thymic region | 1.13e-13 | 4 |
pharyngeal gland | 1.13e-13 | 4 |
thymus primordium | 1.13e-13 | 4 |
pharyngeal epithelium | 1.44e-09 | 6 |
hemopoietic organ | 2.18e-08 | 7 |
immune organ | 2.18e-08 | 7 |
testis | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.17e-09 | 51 |
immune system cancer | 1.17e-09 | 51 |
chronic leukemia | 1.59e-07 | 8 |