FFCP PHASE1:Hg19::chr17:42733789..42733802,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:42733789..42733802,+
|short_description=p3@C17orf104
|description=CAGE_peak_3_at_C17orf104_5end
|association_with_transcript=17bp_to_ENST00000425535_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284071 | |EntrezGene=284071 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26670 | |HGNC=26670 | ||
|TSSclassifier=strong | |||
|UniProt=C9JC06 | |UniProt=C9JC06 | ||
|association_with_transcript=17bp_to_ENST00000425535_5end | |||
|cluster_id=chr17:42733789..42733802,+ | |||
|coexpression_cluster_id=C3639 | |||
|description=CAGE_peak_3_at_C17orf104_5end | |||
|id=chr17:42733789..42733802,+ | |||
|ontology_enrichment_celltype=CL:0000039!6.70e-10!7;CL:0000586!6.70e-10!7;CL:0002535!6.59e-09!2;CL:0002322!8.55e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.04e-24;7!CL:0000586;8.04e-24;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.73e-24,7;CL:0000586,7.73e-24,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.90e-29;10!UBERON:0005564;1.90e-29;10 | |||
|ontology_enrichment_disease=DOID:0050687!5.07e-10!143;DOID:305!5.59e-09!106;DOID:162!1.48e-08!235;DOID:14566!3.09e-08!239;DOID:4362!1.03e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:5409;5.15e-19;4!DOID:1325;2.69e-11;7!DOID:3904;2.69e-11;7!DOID:3905;5.41e-09;9!DOID:3095;5.07e-08;22!DOID:2994;5.07e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,6.77e-19,4;DOID:1325,3.14e-11,7;DOID:3904,3.14e-11,7;DOID:3905,6.11e-09,9;DOID:3095,5.01e-08,22;DOID:2994,5.01e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.91e-13!8;UBERON:0003135!1.53e-09!11;UBERON:0006955!6.59e-09!2;UBERON:0004801!6.59e-09!2;UBERON:0000464!2.98e-08!104;UBERON:0003886!6.34e-08!63;UBERON:0002323!5.02e-07!46;UBERON:0002553!7.30e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.13e-36;8!UBERON:0003135;8.09e-27;11!UBERON:0000991;2.95e-14;21!UBERON:0003101;1.26e-13;22!UBERON:0000079;1.26e-13;22!UBERON:0002323;8.40e-12;45!UBERON:0001264;4.04e-08;10!UBERON:0002553;3.88e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.46e-37,8;UBERON:0003135,7.09e-27,11;UBERON:0000991,2.76e-14,21;UBERON:0009196,2.76e-14,21;UBERON:0009117,2.76e-14,21;UBERON:0005564,2.76e-14,21;UBERON:0002323,4.63e-14,46;UBERON:0004176,1.18e-13,22;UBERON:0003101,1.18e-13,22;UBERON:0000079,1.18e-13,22;UBERON:0004458,3.41e-13,49;UBERON:0003886,5.84e-12,54;UBERON:0002553,1.43e-10,61;UBERON:0001264,4.34e-08,10 | |||
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| ||
|short_description=p3@C17orf104 | |||
}} | }} |
Latest revision as of 22:13, 24 September 2015
Short description: | p3@C17orf104 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C17orf104_5end |
Coexpression cluster: | C3639_testis_testicular_small_epidermoid_choriocarcinoma_argyrophil_hereditary |
Association with transcript: | 17bp_to_ENST00000425535_5end |
EntrezGene: | C17orf104 |
HGNC: | 26670 |
UniProt: | C9JC06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.73e-24 | 7 |
germ cell | 7.73e-24 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 9.46e-37 | 8 |
male reproductive organ | 7.09e-27 | 11 |
gonad | 2.76e-14 | 21 |
indifferent external genitalia | 2.76e-14 | 21 |
indifferent gonad | 2.76e-14 | 21 |
gonad primordium | 2.76e-14 | 21 |
body cavity | 4.63e-14 | 46 |
external genitalia | 1.18e-13 | 22 |
male organism | 1.18e-13 | 22 |
male reproductive system | 1.18e-13 | 22 |
body cavity or lining | 3.41e-13 | 49 |
body cavity precursor | 5.84e-12 | 54 |
anatomical cavity | 1.43e-10 | 61 |
pancreas | 4.34e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 6.77e-19 | 4 |
bronchus cancer | 3.14e-11 | 7 |
bronchogenic carcinoma | 3.14e-11 | 7 |
lung carcinoma | 6.11e-09 | 9 |
germ cell and embryonal cancer | 5.01e-08 | 22 |
germ cell cancer | 5.01e-08 | 22 |