FFCP PHASE1:Hg19::chr17:49243792..49243828,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4831,654364 | |EntrezGene=4831,654364 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33531,7850 | |HGNC=33531,7850 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000485076_5end | |association_with_transcript=0bp_to_ENST00000485076_5end | ||
|cluster_id=chr17:49243792..49243828,+ | |||
|coexpression_cluster_id=C2157 | |||
|description=CAGE_peak_2_at_NME1-NME2_5end,CAGE_peak_2_at_NME2_5end | |description=CAGE_peak_2_at_NME1-NME2_5end,CAGE_peak_2_at_NME2_5end | ||
|id=chr17:49243792..49243828,+ | |id=chr17:49243792..49243828,+ | ||
|ontology_enrichment_celltype=CL:0002321!3.50e-37!248;CL:0000220!4.35e-37!246;CL:0000548!4.57e-33!679;CL:0000004!4.57e-33!679;CL:0000255!4.57e-33!679;CL:0000012!8.92e-33!682;CL:0000222!4.57e-26!119;CL:0000055!4.01e-25!180;CL:0000066!1.67e-24!254;CL:0000144!3.29e-22!625;CL:0000183!2.94e-19!59;CL:0000680!2.98e-18!57;CL:0000056!2.98e-18!57;CL:0000355!2.98e-18!57;CL:0000393!3.01e-18!60;CL:0000211!3.01e-18!60;CL:0000187!7.37e-18!54;CL:0000003!2.64e-17!722;CL:0002371!3.39e-16!591;CL:0000192!2.37e-15!42;CL:0000514!2.37e-15!42;CL:0000359!5.79e-13!32;CL:0000076!8.55e-09!62;CL:0000213!2.39e-08!57;CL:0000215!2.39e-08!57;CL:0000063!6.07e-08!578;CL:0000057!1.02e-07!75;CL:0000221!1.46e-07!71 | |ontology_enrichment_celltype=CL:0002321!3.50e-37!248;CL:0000220!4.35e-37!246;CL:0000548!4.57e-33!679;CL:0000004!4.57e-33!679;CL:0000255!4.57e-33!679;CL:0000012!8.92e-33!682;CL:0000222!4.57e-26!119;CL:0000055!4.01e-25!180;CL:0000066!1.67e-24!254;CL:0000144!3.29e-22!625;CL:0000183!2.94e-19!59;CL:0000680!2.98e-18!57;CL:0000056!2.98e-18!57;CL:0000355!2.98e-18!57;CL:0000393!3.01e-18!60;CL:0000211!3.01e-18!60;CL:0000187!7.37e-18!54;CL:0000003!2.64e-17!722;CL:0002371!3.39e-16!591;CL:0000192!2.37e-15!42;CL:0000514!2.37e-15!42;CL:0000359!5.79e-13!32;CL:0000076!8.55e-09!62;CL:0000213!2.39e-08!57;CL:0000215!2.39e-08!57;CL:0000063!6.07e-08!578;CL:0000057!1.02e-07!75;CL:0000221!1.46e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.40e-12;32!CL:0000192;6.86e-11;43!CL:0000187;1.85e-10;55!CL:0000393;4.65e-09;61!CL:0000211;4.65e-09;61!CL:1000449;7.35e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.09e-37,250;CL:0000222,1.83e-26,121;CL:0000066,1.91e-24,253;CL:0000393,3.62e-18,61;CL:0000211,3.62e-18,61;CL:0000680,3.66e-18,58;CL:0000056,3.66e-18,58;CL:0000355,3.66e-18,58;CL:0000187,9.19e-18,55;CL:0000192,3.10e-15,43;CL:0000514,3.10e-15,43;CL:0000359,5.79e-13,32;CL:0000076,4.59e-09,63;CL:0000213,1.13e-08,58;CL:0000215,1.13e-08,58;CL:0000221,8.30e-08,72;CL:0000057,9.89e-08,76;CL:1000449,7.45e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;6.86e-11;43!CL:0000355;5.56e-10;58!CL:0000222;9.92e-08;121 | |||
|ontology_enrichment_disease=DOID:14566!8.11e-07!239 | |ontology_enrichment_disease=DOID:14566!8.11e-07!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,8.11e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000486!1.01e-20!82;UBERON:0000914!2.90e-20!83;UBERON:0002329!2.90e-20!83;UBERON:0003077!2.90e-20!83;UBERON:0003059!2.90e-20!83;UBERON:0007282!2.90e-20!83;UBERON:0009618!2.90e-20!83;UBERON:0007285!2.90e-20!83;UBERON:0002100!1.13e-19!216;UBERON:0004290!1.93e-19!70;UBERON:0005256!3.22e-19!143;UBERON:0003104!1.33e-18!238;UBERON:0009142!1.33e-18!238;UBERON:0000490!1.35e-16!138;UBERON:0003914!2.59e-16!118;UBERON:0001134!3.77e-16!61;UBERON:0002036!3.77e-16!61;UBERON:0003082!3.77e-16!61;UBERON:0002049!5.19e-16!79;UBERON:0007798!5.19e-16!79;UBERON:0002385!7.96e-15!63;UBERON:0001015!7.96e-15!63;UBERON:0000383!7.96e-15!63;UBERON:0004872!4.19e-14!84;UBERON:0001981!1.13e-13!60;UBERON:0007500!1.13e-13!60;UBERON:0004537!1.13e-13!60;UBERON:0006965!1.13e-13!60;UBERON:0000055!1.43e-13!69;UBERON:0001637!4.67e-13!42;UBERON:0003509!4.67e-13!42;UBERON:0004572!4.67e-13!42;UBERON:0000119!8.50e-11!312;UBERON:0000481!1.94e-10!347;UBERON:0000483!2.97e-10!309;UBERON:0004535!1.24e-09!110;UBERON:0004573!1.28e-09!33;UBERON:0004571!1.28e-09!33;UBERON:0001009!9.01e-09!113;UBERON:0000475!2.94e-08!365;UBERON:0009569!8.52e-07!113 | |ontology_enrichment_uberon=UBERON:0000486!1.01e-20!82;UBERON:0000914!2.90e-20!83;UBERON:0002329!2.90e-20!83;UBERON:0003077!2.90e-20!83;UBERON:0003059!2.90e-20!83;UBERON:0007282!2.90e-20!83;UBERON:0009618!2.90e-20!83;UBERON:0007285!2.90e-20!83;UBERON:0002100!1.13e-19!216;UBERON:0004290!1.93e-19!70;UBERON:0005256!3.22e-19!143;UBERON:0003104!1.33e-18!238;UBERON:0009142!1.33e-18!238;UBERON:0000490!1.35e-16!138;UBERON:0003914!2.59e-16!118;UBERON:0001134!3.77e-16!61;UBERON:0002036!3.77e-16!61;UBERON:0003082!3.77e-16!61;UBERON:0002049!5.19e-16!79;UBERON:0007798!5.19e-16!79;UBERON:0002385!7.96e-15!63;UBERON:0001015!7.96e-15!63;UBERON:0000383!7.96e-15!63;UBERON:0004872!4.19e-14!84;UBERON:0001981!1.13e-13!60;UBERON:0007500!1.13e-13!60;UBERON:0004537!1.13e-13!60;UBERON:0006965!1.13e-13!60;UBERON:0000055!1.43e-13!69;UBERON:0001637!4.67e-13!42;UBERON:0003509!4.67e-13!42;UBERON:0004572!4.67e-13!42;UBERON:0000119!8.50e-11!312;UBERON:0000481!1.94e-10!347;UBERON:0000483!2.97e-10!309;UBERON:0004535!1.24e-09!110;UBERON:0004573!1.28e-09!33;UBERON:0004571!1.28e-09!33;UBERON:0001009!9.01e-09!113;UBERON:0000475!2.94e-08!365;UBERON:0009569!8.52e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0003914;3.37e-09;74!UBERON:0001637;3.41e-09;42!UBERON:0003509;3.41e-09;42!UBERON:0004572;3.41e-09;42!UBERON:0007500;7.50e-09;56!UBERON:0001981;7.50e-09;56!UBERON:0004537;7.50e-09;56!UBERON:0004573;1.17e-08;33!UBERON:0004571;1.17e-08;33!UBERON:0002049;4.01e-07;75!UBERON:0007798;4.01e-07;75!UBERON:0006555;7.35e-07;15!UBERON:0004819;7.35e-07;15!UBERON:0001285;7.35e-07;15!UBERON:0007684;7.35e-07;15!UBERON:0000055;9.43e-07;65 | |||
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| ||
|short_description=p2@NME1-NME2,p2@NME2 | |short_description=p2@NME1-NME2,p2@NME2 | ||
}} | }} |
Latest revision as of 05:13, 16 September 2015
Short description: | p2@NME1-NME2, p2@NME2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NME1-NME2_5end, CAGE_peak_2_at_NME2_5end |
Coexpression cluster: | C2157_Mallassezderived_Smooth_Alveolar_Bronchial_Keratocytes_Tracheal_mesothelioma |
Association with transcript: | 0bp_to_ENST00000485076_5end |
EntrezGene: | 4831,654364 |
HGNC: | 7850&submit=Submit 33531, 7850 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.09e-37 | 250 |
mesodermal cell | 1.83e-26 | 121 |
epithelial cell | 1.91e-24 | 253 |
electrically responsive cell | 3.62e-18 | 61 |
electrically active cell | 3.62e-18 | 61 |
muscle precursor cell | 3.66e-18 | 58 |
myoblast | 3.66e-18 | 58 |
multi-potent skeletal muscle stem cell | 3.66e-18 | 58 |
muscle cell | 9.19e-18 | 55 |
smooth muscle cell | 3.10e-15 | 43 |
smooth muscle myoblast | 3.10e-15 | 43 |
vascular associated smooth muscle cell | 5.79e-13 | 32 |
squamous epithelial cell | 4.59e-09 | 63 |
lining cell | 1.13e-08 | 58 |
barrier cell | 1.13e-08 | 58 |
ectodermal cell | 8.30e-08 | 72 |
fibroblast | 9.89e-08 | 76 |
epithelial cell of nephron | 7.45e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 8.11e-07 | 239 |