FFCP PHASE1:Hg19::chr17:73840774..73840817,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:73840774..73840817,-
|short_description=p2@UNC13D
|description=CAGE_peak_2_at_UNC13D_5end
|association_with_transcript=0bp_to_ENST00000207549,ENST00000412...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=201294 | |EntrezGene=201294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23147 | |HGNC=23147 | ||
|TSSclassifier=strong | |||
|UniProt=Q70J99,B4DTQ6 | |UniProt=Q70J99,B4DTQ6 | ||
|association_with_transcript=0bp_to_ENST00000207549,ENST00000412096,ENST00000448606,NM_199242,uc002jpp.2,uc002jpq.1_5end | |||
|cluster_id=chr17:73840774..73840817,- | |||
|coexpression_cluster_id=C3677 | |||
|description=CAGE_peak_2_at_UNC13D_5end | |||
|id=chr17:73840774..73840817,- | |||
|ontology_enrichment_celltype=CL:0000037!5.99e-24!172;CL:0000566!5.99e-24!172;CL:0002032!5.28e-23!165;CL:0000837!5.28e-23!165;CL:0000988!8.17e-22!182;CL:0002031!1.98e-15!124;CL:0000738!2.91e-15!140;CL:0002087!6.19e-15!119;CL:0000838!4.69e-12!52;CL:0000542!5.47e-12!53;CL:0000051!5.47e-12!53;CL:0000763!1.53e-11!112;CL:0000049!1.53e-11!112;CL:0000066!2.93e-08!254;CL:0000791!2.80e-07!18;CL:0000789!2.80e-07!18;CL:0002420!2.80e-07!18;CL:0002419!2.80e-07!18;CL:0000790!2.80e-07!18;CL:0000084!3.55e-07!25;CL:0000827!3.55e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.59e-08;18!CL:0000789;1.59e-08;18!CL:0002419;1.59e-08;18!CL:0000542;2.33e-07;53!CL:0002368;9.26e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.53e-12,52;CL:0000037,1.75e-12,168;CL:0002032,4.27e-12,161;CL:0000837,4.27e-12,161;CL:0000542,4.75e-12,53;CL:0000051,4.75e-12,53;CL:0000988,6.89e-11,177;CL:0000066,4.28e-09,253;CL:0000791,1.79e-08,18;CL:0000789,1.79e-08,18;CL:0002420,1.79e-08,18;CL:0002419,1.79e-08,18;CL:0000790,1.79e-08,18;CL:0002031,3.95e-07,120;CL:0000236,8.07e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.59e-08;18!CL:0000051;2.33e-07;53!UBERON:0008947;3.52e-07;29 | |||
|ontology_enrichment_disease=DOID:305!5.11e-12!106;DOID:1240!1.70e-09!39;DOID:8692!9.38e-09!31;DOID:1749!6.44e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.23e-08;14!DOID:8692;2.12e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.90e-14,106;DOID:1749,3.11e-08,14;DOID:162,8.27e-08,235;DOID:8692,1.67e-07,31;DOID:1240,2.03e-07,39;DOID:14566,4.00e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.33e-12!169;UBERON:0000925!8.33e-12!169;UBERON:0006595!8.33e-12!169;UBERON:0000065!1.68e-09!53;UBERON:0000077!6.47e-09!130;UBERON:0004921!2.42e-08!129;UBERON:0004185!2.42e-08!129;UBERON:0001004!5.95e-08!72;UBERON:0001041!1.01e-07!98;UBERON:0001007!1.14e-07!155;UBERON:0001555!1.14e-07!155;UBERON:0007026!1.14e-07!155;UBERON:0005631!1.17e-07!14;UBERON:0000158!1.17e-07!14;UBERON:0008947!3.01e-07!38;UBERON:0003258!3.01e-07!38;UBERON:0001737!4.17e-07!9;UBERON:0001557!4.67e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.62e-08;9!UBERON:0001557;2.62e-08;9!UBERON:0000065;9.39e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,7.24e-11,54;UBERON:0004119,1.16e-10,160;UBERON:0000925,1.16e-10,160;UBERON:0006595,1.16e-10,160;UBERON:0005631,2.38e-09,14;UBERON:0000158,2.38e-09,14;UBERON:0008947,1.17e-08,38;UBERON:0003258,1.17e-08,38;UBERON:0001004,2.51e-08,74;UBERON:0001737,2.90e-08,9;UBERON:0001557,5.98e-08,19;UBERON:0000072,1.50e-07,47;UBERON:0003124,2.91e-07,7;UBERON:0001041,3.36e-07,87;UBERON:0004921,6.25e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,25.5563293961569,93.5053565083053,37.1350332621293,44.3128523423802,0,0,0,0,0,0,0,0,0,0,0,0,6.80079311156766,5.41863890369642,3.38456359648821,0.786728553697808,3.45446458287491,3.2511385896376,3.67768489791571,2.10844143144775,4.80680213216824,0,0.710846162437108,1.76160263600908,1.66198622559563,2.4065333696417,1.73608696572681,0.447830948479849,0.647787332037959,0.77272670290256,0.581592955118259,1.51150377475524,1.21292030593908,0.929716147622738,0.411167888021826,0.929119112685311,0.575384784644301,0.512321413058201,0.236482229888585,0.344745680736619,0.645484683583826,0,0.564727018627814,1.09162460023138,0.674170453335254,1.53041946185451,0.641858054152187,1.27867425159808,0.989553900560148,1.59570926097305,0,0.290209238628584,0,1.24564449799115,1.00499466102697,0.521482918420201,1.3031330682307,0,1.84138817993782,0.632924774881769,1.26753171787165,0.212604299965044,0.419317291016752,0.673971786878971,0.600707571366025,0.964353520182481,1.14005097496499,0.99458338599545,0.91332076882317,1.75996244461323,7.64594055766984,5.33705552318133,6.40095333849761,4.80475184443215,8.04653415936277,5.94940385506376,7.63243003628291,7.96898156753228,4.69789751496751,7.64546456250458,1.32171328579026,1.12101712596307,1.58030450865046,2.55722701147983,3.53709686474248,4.31763147898969,6.01871383406441,1.62961133316795,1.4203434172042,3.89653456815823,10.918224774747,3.53527088969805,3.32300841875432,2.97884250141517,10.3753968977797,9.23421367675135,5.91976456573234,4.97430032014527,6.66547097190621,1.77943875794473,1.07016331235885,1.04535523804977,8.3848913596199,1.14966148080576,2.40539211837841,2.78321661221453,3.50421955756506,4.55758417699493,2.85135613334512,3.61380285786655,3.83959833463255,13.742379920758,5.44587679701239,4.10563998460523,7.4594494993151,8.29064606928873,4.05508330871837,0,0,0,0,0,0,0,0,0,0.221729397462564,0,1.83370705696798,2.91436230634034,1.11235332835329,4.86821090482025,5.04976238167875,5.05240249971688,1.19245312152671,0.571994910780128,0.74291500265913,1.19257444420023,0,0.694281003215189,0,0.838998872419812,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.673588117878509,0.225222960966644,0,0,0,0,3.87780264148325,3.05265836499774,0,0,0,0,0.354668382198357,1.68203280042692,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,2.18196896472668,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,17.2727928058172,16.0155455574197,11.3275184045237,16.7646838553239,14.3800433100988,11.1517190982215,14.9662752057782,15.1090528146516,13.4661504931237,1.4763109092493,0,0.4115740113314,0,0,0,0,0,6.3953988042419,0,0,1.1240175325762,0.201057944823262,0.740707561268237,0,0,0,0,0,0,0,0,17.3844967551041,10.3018339451385,1.96973604869918,1.63802985597466,1.48631162288728,0,0.503946384596579,0.283550194484773,2.14940454486836,0.290633938513962,1.91691339582606,5.41929561685538,10.2136183455342,2.48793738648926,2.59415916150531,2.65109110195398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0.099972991182057,2.43247561282381,0,0,0,0,0,0,0,0,5.26800176769578,9.06341496928865,4.74380664690938,6.41715181398742,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,4.34212854858063,3.8828556147351,4.69601254335155,36.0721810021049,43.2732142727292,49.5920081060676,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0.200506470303285,2.3941057123333,0,0,0,7.670393419426,1.5403067420883,0,4.38417673959782,0,0,0,0,0,0,0.501689773854853,1.01950509218015,1.66215201785745,2.68649705666614,1.31555925987561,2.3529190592241,11.7967057553539,13.7766151193876,16.9196765225438,5.97637867556789,0,0,2.29706215198469,2.60024098414608,0,0,0,0,0,0,0,0.0852266274161009,0,8.76010051413184,11.3392139745413,6.38063562472921,13.6563004154992,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,2.4055528181378,4.02181365321472,3.26672954583968,7.15492885903522,33.1489136956847,32.0095803768489,40.3521439718375,18.6075954167637,2.02979043692868,5.35246044999663,2.84823593587081,2.62054953003568,5.34770955012053,3.8908398671563,4.32025149790492,3.96562588147135,0,0,12.2520107990516,0.371606350251437,2.8853842595289,0.995985806877798,0.159426272728822,3.19326994292507,2.10655907145603,13.7587828770524,6.16781686521655,5.33514638415572,4.33645890163065,3.76031749855256,2.50634477090067,0.677167111206413,1.1241165257259,1.61439765752838,1.70338495076131,1.71752672377882,0.307240764308458,0.223676107892416,0.333698283423817,5.66625476665917,5.01131113011436,1.23087398947712,4.8682022125677,0.33307196799782,9.86909035614947,0,0.293016358543788,0,25.9663085366525,0,62.0735660317994,24.3511038282764,88.7694429066781,0,0.140669416410513,0,0.16480387422676,0,0.19924798825107,1.10513566212459,0,0.20453736500431,5.78498585667027,0,43.6760186576008,34.0140231883657,3.06943422136123,1.28236427328014,0,0,0,0,0,2.08342208868187,1.48681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| ||
|short_description=p2@UNC13D | |||
}} | }} |
Latest revision as of 12:45, 17 September 2015
Short description: | p2@UNC13D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UNC13D_5end |
Coexpression cluster: | C3677_Alveolar_amniotic_papillotubular_Placental_mucinous_bile_Amniotic |
Association with transcript: | 0bp_to_ENST00000207549, ENST00000412096, ENST00000448606, NM_199242, uc002jpp.2, uc002jpq.1_5end |
EntrezGene: | UNC13D |
HGNC: | 23147 |
UniProt: | Q70J99B4DTQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.53e-12 | 52 |
hematopoietic stem cell | 1.75e-12 | 168 |
hematopoietic oligopotent progenitor cell | 4.27e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.27e-12 | 161 |
lymphocyte | 4.75e-12 | 53 |
common lymphoid progenitor | 4.75e-12 | 53 |
hematopoietic cell | 6.89e-11 | 177 |
epithelial cell | 4.28e-09 | 253 |
mature alpha-beta T cell | 1.79e-08 | 18 |
alpha-beta T cell | 1.79e-08 | 18 |
immature T cell | 1.79e-08 | 18 |
mature T cell | 1.79e-08 | 18 |
immature alpha-beta T cell | 1.79e-08 | 18 |
hematopoietic lineage restricted progenitor cell | 3.95e-07 | 120 |
B cell | 8.07e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
respiratory tract | 7.24e-11 | 54 |
endoderm-derived structure | 1.16e-10 | 160 |
endoderm | 1.16e-10 | 160 |
presumptive endoderm | 1.16e-10 | 160 |
extraembryonic membrane | 2.38e-09 | 14 |
membranous layer | 2.38e-09 | 14 |
respiratory primordium | 1.17e-08 | 38 |
endoderm of foregut | 1.17e-08 | 38 |
respiratory system | 2.51e-08 | 74 |
larynx | 2.90e-08 | 9 |
upper respiratory tract | 5.98e-08 | 19 |
segment of respiratory tract | 1.50e-07 | 47 |
chorion | 2.91e-07 | 7 |
foregut | 3.36e-07 | 87 |
subdivision of digestive tract | 6.25e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.90e-14 | 106 |
squamous cell carcinoma | 3.11e-08 | 14 |
cancer | 8.27e-08 | 235 |
myeloid leukemia | 1.67e-07 | 31 |
leukemia | 2.03e-07 | 39 |
disease of cellular proliferation | 4.00e-07 | 239 |