FFCP PHASE1:Hg19::chr10:74653506..74653521,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170392 | |EntrezGene=170392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29953 | |HGNC=29953 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWZ8,C9JXV7 | |UniProt=Q8WWZ8,C9JXV7 | ||
|association_with_transcript=167bp_to_ENST00000334011,ENST00000415725,NM_152635,uc001jte.1,uc009xqs.1_5end | |association_with_transcript=167bp_to_ENST00000334011,ENST00000415725,NM_152635,uc001jte.1,uc009xqs.1_5end | ||
|cluster_id=chr10:74653506..74653521,+ | |||
|coexpression_cluster_id=C129 | |coexpression_cluster_id=C129 | ||
|description=CAGE_peak_1_at_OIT3_5end | |description=CAGE_peak_1_at_OIT3_5end | ||
|id=chr10:74653506..74653521,+ | |id=chr10:74653506..74653521,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.60e-09!12;CL:0000417!1.60e-09!12;CL:0000668!1.60e-09!12;CL:0000414!1.60e-09!12;CL:0000412!1.60e-09!12;CL:0000182!1.60e-09!12;CL:0002548!1.59e-08!6;CL:0002262!3.09e-07!2;CL:1000398!3.09e-07!2;CL:0002494!4.91e-07!16 | |ontology_enrichment_celltype=CL:0000181!1.60e-09!12;CL:0000417!1.60e-09!12;CL:0000668!1.60e-09!12;CL:0000414!1.60e-09!12;CL:0000412!1.60e-09!12;CL:0000182!1.60e-09!12;CL:0002548!1.59e-08!6;CL:0002262!3.09e-07!2;CL:1000398!3.09e-07!2;CL:0002494!4.91e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.72e-19;12!CL:0002262;1.37e-13;2!CL:1000398;1.37e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.72e-19,12;CL:0002262,1.37e-13,2;CL:1000398,1.37e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.22e-10;11!UBERON:0009497;1.08e-08;13 | |||
|ontology_enrichment_disease=DOID:178!7.68e-13!1;DOID:326!7.68e-13!1;DOID:3978!7.68e-13!1;DOID:3394!7.68e-13!1;DOID:5844!7.68e-13!1;DOID:114!4.69e-07!2 | |ontology_enrichment_disease=DOID:178!7.68e-13!1;DOID:326!7.68e-13!1;DOID:3978!7.68e-13!1;DOID:3394!7.68e-13!1;DOID:5844!7.68e-13!1;DOID:114!4.69e-07!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!2.73e-28!26;UBERON:0002106!9.26e-17!3;UBERON:0004854!9.26e-17!3;UBERON:0009034!9.26e-17!3;UBERON:0002095!9.26e-17!3;UBERON:0004782!9.26e-17!3;UBERON:0003281!9.26e-17!3;UBERON:0009664!9.26e-17!3;UBERON:0002296!9.26e-17!3;UBERON:0005602!9.26e-17!3;UBERON:0001179!9.26e-17!3;UBERON:0006293!9.26e-17!3;UBERON:0002107!1.05e-15!19;UBERON:0006925!1.05e-15!19;UBERON:0008836!1.05e-15!19;UBERON:0004177!1.18e-15!7;UBERON:0008835!1.47e-13!22;UBERON:0003894!1.47e-13!22;UBERON:0005172!5.71e-13!55;UBERON:0005173!5.71e-13!55;UBERON:0009854!5.74e-13!23;UBERON:0007499!6.33e-12!25;UBERON:0009497!6.33e-12!25;UBERON:0000015!6.33e-12!25;UBERON:0002423!6.33e-12!25;UBERON:0006235!6.33e-12!25;UBERON:0004161!6.33e-12!25;UBERON:0002368!7.00e-12!35;UBERON:0002417!1.31e-11!61;UBERON:0000916!1.31e-11!61;UBERON:0009856!1.83e-11!26;UBERON:0007100!1.32e-10!27;UBERON:0002365!1.34e-09!31;UBERON:0002330!1.34e-09!31;UBERON:0000949!3.70e-09!45;UBERON:0001041!1.05e-08!98;UBERON:0001048!1.92e-08!168;UBERON:0000948!6.31e-08!24;UBERON:0005498!6.31e-08!24;UBERON:0004140!6.31e-08!24;UBERON:0009881!6.31e-08!24;UBERON:0004141!6.31e-08!24;UBERON:0003084!6.31e-08!24;UBERON:0007005!6.31e-08!24;UBERON:0004139!6.31e-08!24;UBERON:0004291!6.31e-08!24;UBERON:0003103!1.41e-07!69;UBERON:0003929!1.45e-07!54;UBERON:0003914!5.49e-07!118;UBERON:0002530!6.88e-07!59;UBERON:0000945!7.66e-07!8;UBERON:0010039!7.66e-07!8 | |ontology_enrichment_uberon=UBERON:0005057!2.73e-28!26;UBERON:0002106!9.26e-17!3;UBERON:0004854!9.26e-17!3;UBERON:0009034!9.26e-17!3;UBERON:0002095!9.26e-17!3;UBERON:0004782!9.26e-17!3;UBERON:0003281!9.26e-17!3;UBERON:0009664!9.26e-17!3;UBERON:0002296!9.26e-17!3;UBERON:0005602!9.26e-17!3;UBERON:0001179!9.26e-17!3;UBERON:0006293!9.26e-17!3;UBERON:0002107!1.05e-15!19;UBERON:0006925!1.05e-15!19;UBERON:0008836!1.05e-15!19;UBERON:0004177!1.18e-15!7;UBERON:0008835!1.47e-13!22;UBERON:0003894!1.47e-13!22;UBERON:0005172!5.71e-13!55;UBERON:0005173!5.71e-13!55;UBERON:0009854!5.74e-13!23;UBERON:0007499!6.33e-12!25;UBERON:0009497!6.33e-12!25;UBERON:0000015!6.33e-12!25;UBERON:0002423!6.33e-12!25;UBERON:0006235!6.33e-12!25;UBERON:0004161!6.33e-12!25;UBERON:0002368!7.00e-12!35;UBERON:0002417!1.31e-11!61;UBERON:0000916!1.31e-11!61;UBERON:0009856!1.83e-11!26;UBERON:0007100!1.32e-10!27;UBERON:0002365!1.34e-09!31;UBERON:0002330!1.34e-09!31;UBERON:0000949!3.70e-09!45;UBERON:0001041!1.05e-08!98;UBERON:0001048!1.92e-08!168;UBERON:0000948!6.31e-08!24;UBERON:0005498!6.31e-08!24;UBERON:0004140!6.31e-08!24;UBERON:0009881!6.31e-08!24;UBERON:0004141!6.31e-08!24;UBERON:0003084!6.31e-08!24;UBERON:0007005!6.31e-08!24;UBERON:0004139!6.31e-08!24;UBERON:0004291!6.31e-08!24;UBERON:0003103!1.41e-07!69;UBERON:0003929!1.45e-07!54;UBERON:0003914!5.49e-07!118;UBERON:0002530!6.88e-07!59;UBERON:0000945!7.66e-07!8;UBERON:0010039!7.66e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.83e-33;19!UBERON:0006925;9.83e-33;19!UBERON:0002423;5.50e-25;25!UBERON:0002365;3.66e-20;31!UBERON:0002330;3.66e-20;31!UBERON:0002368;1.00e-16;33!UBERON:0001281;1.37e-13;2!UBERON:0003497;1.37e-13;2!UBERON:0003909;1.37e-13;2!UBERON:0003835;1.37e-13;2!UBERON:0002417;3.46e-12;58!UBERON:0000916;3.46e-12;58!UBERON:0000949;3.13e-11;43!UBERON:0005172;8.97e-11;52!UBERON:0005173;8.97e-11;52!UBERON:0002106;1.30e-09;3!UBERON:0001280;1.67e-09;3!UBERON:0004647;1.67e-09;3!UBERON:0001007;2.53e-07;81!UBERON:0002530;5.10e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.83e-33,19;UBERON:0006925,9.83e-33,19;UBERON:0008836,9.83e-33,19;UBERON:0008835,2.47e-28,22;UBERON:0003894,2.47e-28,22;UBERON:0009854,4.03e-27,23;UBERON:0007499,5.50e-25,25;UBERON:0009497,5.50e-25,25;UBERON:0000015,5.50e-25,25;UBERON:0002423,5.50e-25,25;UBERON:0006235,5.50e-25,25;UBERON:0004161,5.50e-25,25;UBERON:0009856,4.84e-24,26;UBERON:0002365,3.16e-20,31;UBERON:0002330,3.16e-20,31;UBERON:0002368,5.89e-18,35;UBERON:0005172,1.21e-16,54;UBERON:0005173,1.21e-16,54;UBERON:0002417,5.37e-15,60;UBERON:0000916,5.37e-15,60;UBERON:0000949,4.89e-14,45;UBERON:0001281,1.37e-13,2;UBERON:0003497,1.37e-13,2;UBERON:0003909,1.37e-13,2;UBERON:0003835,1.37e-13,2;UBERON:0003929,9.64e-12,54;UBERON:0002530,9.10e-11,59;UBERON:0001041,2.24e-10,87;UBERON:0002106,1.30e-09,3;UBERON:0004854,1.30e-09,3;UBERON:0009034,1.30e-09,3;UBERON:0002095,1.30e-09,3;UBERON:0004782,1.30e-09,3;UBERON:0003281,1.30e-09,3;UBERON:0009664,1.30e-09,3;UBERON:0002296,1.30e-09,3;UBERON:0005602,1.30e-09,3;UBERON:0001179,1.30e-09,3;UBERON:0006293,1.30e-09,3;UBERON:0001280,1.67e-09,3;UBERON:0004647,1.67e-09,3;UBERON:0005171,1.67e-09,3;UBERON:0005177,6.05e-09,101;UBERON:0009569,4.56e-08,112;UBERON:0005911,8.43e-08,82;UBERON:0004921,1.36e-07,118 | |||
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|short_description=p1@OIT3 | |short_description=p1@OIT3 | ||
}} | }} |
Latest revision as of 06:17, 19 September 2015
Short description: | p1@OIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OIT3_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | 167bp_to_ENST00000334011, ENST00000415725, NM_152635, uc001jte.1, uc009xqs.1_5end |
EntrezGene: | OIT3 |
HGNC: | 29953 |
UniProt: | Q8WWZ8C9JXV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.72e-19 | 12 |
endothelial cell of sinusoid | 1.37e-13 | 2 |
endothelial cell of hepatic sinusoid | 1.37e-13 | 2 |