FFCP PHASE1:Hg19::chr10:90465995..90466007,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:90465995..90466007,+ | |||
|coexpression_cluster_id=C1599 | |coexpression_cluster_id=C1599 | ||
|description=CAGE_peak_at_chr10:90465995..90466007,+ | |description=CAGE_peak_at_chr10:90465995..90466007,+ | ||
|id=chr10:90465995..90466007,+ | |id=chr10:90465995..90466007,+ | ||
|ontology_enrichment_celltype=CL:0002623!5.90e-13!3;CL:0002621!1.66e-12!3;CL:0002076!2.24e-12!43;CL:0002251!1.10e-10!21;CL:0000223!1.03e-09!59;CL:0001014!1.36e-09!2;CL:0001016!1.36e-09!2;CL:0000622!6.17e-08!5 | |ontology_enrichment_celltype=CL:0002623!5.90e-13!3;CL:0002621!1.66e-12!3;CL:0002076!2.24e-12!43;CL:0002251!1.10e-10!21;CL:0000223!1.03e-09!59;CL:0001014!1.36e-09!2;CL:0001016!1.36e-09!2;CL:0000622!6.17e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0001014;5.52e-34;2!CL:0001016;5.52e-34;2!CL:0002623;4.87e-23;3!CL:0000453;3.05e-14;5!CL:0000622;3.05e-14;5!CL:0000154;4.94e-12;6!CL:0000840;4.94e-12;5!CL:0000150;2.51e-08;9!CL:0000990;2.51e-08;8!CL:0002251;4.57e-08;20!CL:0000451;5.72e-07;10!CL:0002621;8.38e-07;3!CL:0002166;9.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.07e-34,2;CL:0001016,5.07e-34,2;CL:0002623,5.15e-23,3;CL:0000453,2.95e-14,5;CL:0000622,3.15e-14,5;CL:0000840,4.81e-12,5;CL:0001029,4.81e-12,5;CL:0000154,5.08e-12,6;CL:0000990,2.46e-08,8;CL:0000150,2.55e-08,9;CL:0002251,4.57e-08,20;CL:0000451,5.64e-07,10;CL:0002621,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;9.46e-10;2!UBERON:0010056;9.46e-10;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;5.26e-18;1!DOID:3149;5.26e-18;1!DOID:3451;1.12e-09;2!DOID:4159;1.12e-09;2!DOID:0060122;1.12e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.44e-18,1;DOID:3149,4.44e-18,1;DOID:3451,1.03e-09,2;DOID:4159,1.03e-09,2;DOID:0060122,1.03e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000166!3.81e-17!21;UBERON:0000165!7.53e-15!28;UBERON:0000930!7.53e-15!28;UBERON:0000161!1.17e-13!35;UBERON:0001949!1.66e-12!3;UBERON:0003408!8.46e-10!10;UBERON:0001042!8.62e-10!10;UBERON:0009145!8.62e-10!10;UBERON:0001444!2.51e-09!48;UBERON:0006562!7.17e-09!11;UBERON:0003102!4.45e-08!95;UBERON:0000078!1.37e-07!18;UBERON:0001004!1.47e-07!72 | |ontology_enrichment_uberon=UBERON:0000166!3.81e-17!21;UBERON:0000165!7.53e-15!28;UBERON:0000930!7.53e-15!28;UBERON:0000161!1.17e-13!35;UBERON:0001949!1.66e-12!3;UBERON:0003408!8.46e-10!10;UBERON:0001042!8.62e-10!10;UBERON:0009145!8.62e-10!10;UBERON:0001444!2.51e-09!48;UBERON:0006562!7.17e-09!11;UBERON:0003102!4.45e-08!95;UBERON:0000078!1.37e-07!18;UBERON:0001004!1.47e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.66e-18;1!UBERON:0000014;8.74e-18;4!UBERON:0001044;4.94e-12;6!UBERON:0003293;4.94e-12;6!UBERON:0003294;4.94e-12;6!UBERON:0010047;4.94e-12;6!UBERON:0003408;4.94e-12;6!UBERON:0000167;4.94e-12;6!UBERON:0000165;8.03e-10;28!UBERON:0000161;1.84e-08;19!UBERON:0000166;1.84e-08;19!UBERON:0001723;6.50e-07;3!UBERON:0001033;6.50e-07;3!UBERON:0001949;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.66e-18,1;UBERON:0000014,8.04e-18,4;UBERON:0000166,2.04e-12,22;UBERON:0001044,5.08e-12,6;UBERON:0003293,5.08e-12,6;UBERON:0003294,5.08e-12,6;UBERON:0010047,5.08e-12,6;UBERON:0000167,5.08e-12,6;UBERON:0000165,1.71e-09,29;UBERON:0000930,1.71e-09,29;UBERON:0003102,8.03e-08,99;UBERON:0000161,1.07e-07,36;UBERON:0003408,1.42e-07,10;UBERON:0000033,2.03e-07,56;UBERON:0001723,6.50e-07,3;UBERON:0001033,6.50e-07,3;UBERON:0010056,6.50e-07,3;UBERON:0001949,8.15e-07,3 | |||
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| ||
|short_description=p@chr10:90465995..90466007,+ | |short_description=p@chr10:90465995..90466007,+ | ||
}} | }} |
Latest revision as of 16:27, 23 July 2015
Short description: | p@chr10:90465995..90466007, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90465995..90466007, + |
Coexpression cluster: | C1599_skin_immature_uterus_salivary_cervix_penis_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.07e-34 | 2 |
immature CD1a-positive Langerhans cell | 5.07e-34 | 2 |
acinar cell of salivary gland | 5.15e-23 | 3 |
Langerhans cell | 2.95e-14 | 5 |
acinar cell | 3.15e-14 | 5 |
immature conventional dendritic cell | 4.81e-12 | 5 |
common dendritic progenitor | 4.81e-12 | 5 |
protein secreting cell | 5.08e-12 | 6 |
conventional dendritic cell | 2.46e-08 | 8 |
glandular epithelial cell | 2.55e-08 | 9 |
epithelial cell of alimentary canal | 4.57e-08 | 20 |
dendritic cell | 5.64e-07 | 10 |
gingival epithelial cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface | 2.66e-18 | 1 |
zone of skin | 8.04e-18 | 4 |
oral opening | 2.04e-12 | 22 |
saliva-secreting gland | 5.08e-12 | 6 |
gland of oral region | 5.08e-12 | 6 |
gland of foregut | 5.08e-12 | 6 |
oral gland | 5.08e-12 | 6 |
oral cavity | 5.08e-12 | 6 |
mouth | 1.71e-09 | 29 |
stomodeum | 1.71e-09 | 29 |
surface structure | 8.03e-08 | 99 |
orifice | 1.07e-07 | 36 |
gland of gut | 1.42e-07 | 10 |
head | 2.03e-07 | 56 |
tongue | 6.50e-07 | 3 |
gustatory system | 6.50e-07 | 3 |
future tongue | 6.50e-07 | 3 |
gingival epithelium | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.44e-18 | 1 |
keratoacanthoma | 4.44e-18 | 1 |
skin carcinoma | 1.03e-09 | 2 |
skin cancer | 1.03e-09 | 2 |
integumentary system cancer | 1.03e-09 | 2 |