FFCP PHASE1:Hg19::chr14:100841675..100841691,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7453 | |EntrezGene=7453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12729 | |HGNC=12729 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4N0,G3V2Y7,G3V4S4,G3V227 | |UniProt=G3V4N0,G3V2Y7,G3V4S4,G3V227 | ||
|association_with_transcript=0bp_to_ENST00000554509,ENST00000555410,ENST00000555813,ENST00000556698,ENST00000557135,uc001yhg.1_5end | |association_with_transcript=0bp_to_ENST00000554509,ENST00000555410,ENST00000555813,ENST00000556698,ENST00000557135,uc001yhg.1_5end | ||
|cluster_id=chr14:100841675..100841691,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_1_at_WARS_5end | |description=CAGE_peak_1_at_WARS_5end | ||
|id=chr14:100841675..100841691,- | |id=chr14:100841675..100841691,- | ||
|ontology_enrichment_celltype=CL:0002057!5.88e-27!42;CL:0000860!9.20e-24!45;CL:0000766!2.08e-22!76;CL:0002194!3.02e-20!63;CL:0000576!3.02e-20!63;CL:0000040!3.02e-20!63;CL:0000559!3.02e-20!63;CL:0002009!4.37e-19!65;CL:0000839!2.22e-17!70;CL:0000557!9.32e-17!71;CL:0000738!3.18e-13!140;CL:0002087!4.92e-12!119;CL:0000763!1.19e-10!112;CL:0000049!1.19e-10!112;CL:0002031!1.14e-09!124;CL:0000988!4.96e-08!182;CL:0000037!2.23e-07!172;CL:0000566!2.23e-07!172;CL:0002032!3.07e-07!165;CL:0000837!3.07e-07!165 | |ontology_enrichment_celltype=CL:0002057!5.88e-27!42;CL:0000860!9.20e-24!45;CL:0000766!2.08e-22!76;CL:0002194!3.02e-20!63;CL:0000576!3.02e-20!63;CL:0000040!3.02e-20!63;CL:0000559!3.02e-20!63;CL:0002009!4.37e-19!65;CL:0000839!2.22e-17!70;CL:0000557!9.32e-17!71;CL:0000738!3.18e-13!140;CL:0002087!4.92e-12!119;CL:0000763!1.19e-10!112;CL:0000049!1.19e-10!112;CL:0002031!1.14e-09!124;CL:0000988!4.96e-08!182;CL:0000037!2.23e-07!172;CL:0000566!2.23e-07!172;CL:0002032!3.07e-07!165;CL:0000837!3.07e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.27e-20;33!CL:0002057;6.27e-20;33!CL:0000473;1.36e-16;39!CL:0000234;1.36e-16;39!CL:0000576;2.19e-15;48!CL:0000766;1.06e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.63e-27,42;CL:0002057,3.63e-27,42;CL:0000473,8.37e-27,48;CL:0000234,8.37e-27,48;CL:0000766,4.36e-25,72;CL:0002194,2.93e-23,59;CL:0000576,2.93e-23,59;CL:0000040,2.93e-23,59;CL:0000559,2.93e-23,59;CL:0002009,6.70e-22,61;CL:0000839,1.48e-19,66;CL:0000557,4.14e-19,67;CL:0000738,9.12e-15,136;CL:0002087,1.20e-13,115;CL:0000763,8.07e-12,108;CL:0000049,8.07e-12,108;CL:0002031,7.50e-11,120;CL:0000988,9.17e-09,177;CL:0000037,2.68e-08,168;CL:0002032,4.02e-08,161;CL:0000837,4.02e-08,161;CL:0002393,9.83e-07,9;CL:0002397,9.83e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;9.98e-20;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.84e-22!112;UBERON:0002390!3.52e-19!102;UBERON:0003061!3.52e-19!102;UBERON:0002371!2.79e-13!80;UBERON:0002405!4.55e-13!115;UBERON:0007023!4.12e-12!115;UBERON:0001474!9.77e-12!86;UBERON:0003081!1.05e-11!216;UBERON:0004765!1.54e-07!101;UBERON:0001434!1.54e-07!101;UBERON:0000178!6.04e-07!15;UBERON:0000179!6.04e-07!15;UBERON:0000463!6.04e-07!15 | |ontology_enrichment_uberon=UBERON:0002193!1.84e-22!112;UBERON:0002390!3.52e-19!102;UBERON:0003061!3.52e-19!102;UBERON:0002371!2.79e-13!80;UBERON:0002405!4.55e-13!115;UBERON:0007023!4.12e-12!115;UBERON:0001474!9.77e-12!86;UBERON:0003081!1.05e-11!216;UBERON:0004765!1.54e-07!101;UBERON:0001434!1.54e-07!101;UBERON:0000178!6.04e-07!15;UBERON:0000179!6.04e-07!15;UBERON:0000463!6.04e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.45e-07;15!UBERON:0000179;5.45e-07;15!UBERON:0000463;5.45e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.97e-25,108;UBERON:0002390,1.53e-21,98;UBERON:0003061,1.53e-21,98;UBERON:0002405,3.05e-19,93;UBERON:0002371,2.59e-15,76;UBERON:0001474,1.48e-13,82;UBERON:0003081,1.49e-13,203;UBERON:0007023,4.87e-12,114;UBERON:0004765,7.84e-10,90;UBERON:0001434,4.78e-08,100;UBERON:0000926,1.36e-07,315;UBERON:0004120,1.36e-07,315;UBERON:0006603,1.36e-07,315;UBERON:0000178,5.45e-07,15;UBERON:0000179,5.45e-07,15;UBERON:0000463,5.45e-07,15 | |||
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| ||
|short_description=p1@WARS | |short_description=p1@WARS | ||
}} | }} |
Latest revision as of 10:17, 18 September 2015
Short description: | p1@WARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WARS_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000554509, ENST00000555410, ENST00000555813, ENST00000556698, ENST00000557135, uc001yhg.1_5end |
EntrezGene: | WARS |
HGNC: | 12729 |
UniProt: | G3V4N0G3V2Y7G3V4S4G3V227 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.63e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.63e-27 | 42 |
defensive cell | 8.37e-27 | 48 |
phagocyte | 8.37e-27 | 48 |
myeloid leukocyte | 4.36e-25 | 72 |
monopoietic cell | 2.93e-23 | 59 |
monocyte | 2.93e-23 | 59 |
monoblast | 2.93e-23 | 59 |
promonocyte | 2.93e-23 | 59 |
macrophage dendritic cell progenitor | 6.70e-22 | 61 |
myeloid lineage restricted progenitor cell | 1.48e-19 | 66 |
granulocyte monocyte progenitor cell | 4.14e-19 | 67 |
leukocyte | 9.12e-15 | 136 |
nongranular leukocyte | 1.20e-13 | 115 |
myeloid cell | 8.07e-12 | 108 |
common myeloid progenitor | 8.07e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 7.50e-11 | 120 |
hematopoietic cell | 9.17e-09 | 177 |
hematopoietic stem cell | 2.68e-08 | 168 |
hematopoietic oligopotent progenitor cell | 4.02e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.02e-08 | 161 |
intermediate monocyte | 9.83e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.83e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.97e-25 | 108 |
hematopoietic system | 1.53e-21 | 98 |
blood island | 1.53e-21 | 98 |
immune system | 3.05e-19 | 93 |
bone marrow | 2.59e-15 | 76 |
bone element | 1.48e-13 | 82 |
lateral plate mesoderm | 1.49e-13 | 203 |
adult organism | 4.87e-12 | 114 |
skeletal element | 7.84e-10 | 90 |
skeletal system | 4.78e-08 | 100 |
mesoderm | 1.36e-07 | 315 |
mesoderm-derived structure | 1.36e-07 | 315 |
presumptive mesoderm | 1.36e-07 | 315 |
blood | 5.45e-07 | 15 |
haemolymphatic fluid | 5.45e-07 | 15 |
organism substance | 5.45e-07 | 15 |