FFCP PHASE1:Hg19::chr17:38487563..38487578,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5914 | |EntrezGene=5914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9864 | |HGNC=9864 | ||
|TSSclassifier=strong | |||
|UniProt=P10276 | |UniProt=P10276 | ||
|association_with_transcript=63bp_to_X06538_5end | |association_with_transcript=63bp_to_X06538_5end | ||
|cluster_id=chr17:38487563..38487578,+ | |||
|coexpression_cluster_id=C2404 | |coexpression_cluster_id=C2404 | ||
|description=CAGE_peak_10_at_RARA_5end | |description=CAGE_peak_10_at_RARA_5end | ||
|id=chr17:38487563..38487578,+ | |id=chr17:38487563..38487578,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.18e-23!42;CL:0000860!2.10e-21!45;CL:0000766!5.29e-21!76;CL:0000557!8.00e-20!71;CL:0000839!1.45e-18!70;CL:0002009!1.63e-18!65;CL:0002194!6.57e-18!63;CL:0000576!6.57e-18!63;CL:0000040!6.57e-18!63;CL:0000559!6.57e-18!63;CL:0000763!2.29e-14!112;CL:0000049!2.29e-14!112;CL:0000738!7.36e-11!140;CL:0002031!6.63e-10!124;CL:0002087!2.97e-09!119;CL:0002032!1.60e-08!165;CL:0000837!1.60e-08!165;CL:0000037!2.00e-08!172;CL:0000566!2.00e-08!172;CL:0000988!6.72e-08!182 | |ontology_enrichment_celltype=CL:0002057!4.18e-23!42;CL:0000860!2.10e-21!45;CL:0000766!5.29e-21!76;CL:0000557!8.00e-20!71;CL:0000839!1.45e-18!70;CL:0002009!1.63e-18!65;CL:0002194!6.57e-18!63;CL:0000576!6.57e-18!63;CL:0000040!6.57e-18!63;CL:0000559!6.57e-18!63;CL:0000763!2.29e-14!112;CL:0000049!2.29e-14!112;CL:0000738!7.36e-11!140;CL:0002031!6.63e-10!124;CL:0002087!2.97e-09!119;CL:0002032!1.60e-08!165;CL:0000837!1.60e-08!165;CL:0000037!2.00e-08!172;CL:0000566!2.00e-08!172;CL:0000988!6.72e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.07e-71;33!CL:0002057;3.07e-71;33!CL:0000473;4.20e-56;39!CL:0000234;4.20e-56;39!CL:0000576;1.24e-34;48!CL:0000766;2.15e-31;69!CL:0000763;4.07e-15;100!CL:0000775;1.47e-11;3!CL:0000097;1.59e-11;5!CL:0000738;4.88e-09;136!CL:0002087;2.98e-08;104!CL:0000317;3.29e-07;2!CL:1000448;3.29e-07;2!CL:0002308;3.29e-07;2!CL:0002140;3.29e-07;2!CL:0000094;3.84e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.87e-65,72;CL:0000860,6.06e-65,42;CL:0002057,6.06e-65,42;CL:0000473,6.60e-64,48;CL:0000234,6.60e-64,48;CL:0000839,1.02e-56,66;CL:0000557,9.65e-56,67;CL:0002194,2.10e-49,59;CL:0000576,2.10e-49,59;CL:0000040,2.10e-49,59;CL:0000559,2.10e-49,59;CL:0002009,1.56e-47,61;CL:0000763,3.60e-40,108;CL:0000049,3.60e-40,108;CL:0000738,1.39e-31,136;CL:0002031,3.32e-27,120;CL:0002032,1.04e-23,161;CL:0000837,1.04e-23,161;CL:0000037,1.18e-23,168;CL:0002087,5.10e-23,115;CL:0000988,6.07e-22,177;CL:0000097,1.05e-11,5;CL:0002028,1.05e-11,5;CL:0000775,1.29e-11,3;CL:0000134,1.09e-10,354;CL:0002320,2.87e-10,361;CL:0000219,1.67e-09,386;CL:0000048,2.08e-09,427;CL:0000723,4.07e-09,433;CL:0000034,9.71e-09,441;CL:0000094,3.58e-07,8;CL:0000317,4.26e-07,2;CL:1000448,4.26e-07,2;CL:0002308,4.26e-07,2;CL:0002140,4.26e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;8.26e-48;42!CL:0000049;2.02e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.70e-18!102;UBERON:0003061!8.70e-18!102;UBERON:0002193!7.73e-16!112;UBERON:0002371!1.49e-15!80;UBERON:0001474!2.95e-14!86;UBERON:0002405!2.32e-12!115;UBERON:0004765!3.00e-12!101;UBERON:0001434!3.00e-12!101 | |ontology_enrichment_uberon=UBERON:0002390!8.70e-18!102;UBERON:0003061!8.70e-18!102;UBERON:0002193!7.73e-16!112;UBERON:0002371!1.49e-15!80;UBERON:0001474!2.95e-14!86;UBERON:0002405!2.32e-12!115;UBERON:0004765!3.00e-12!101;UBERON:0001434!3.00e-12!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;3.29e-07;2!UBERON:0007771;3.29e-07;2!UBERON:0003297;3.29e-07;2!UBERON:0001821;3.29e-07;2!UBERON:0003487;3.29e-07;2!UBERON:0001820;3.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.06e-48,76;UBERON:0001474,5.90e-44,82;UBERON:0002390,7.24e-40,98;UBERON:0003061,7.24e-40,98;UBERON:0004765,2.92e-39,90;UBERON:0002405,1.04e-37,93;UBERON:0002193,2.61e-35,108;UBERON:0001434,1.92e-34,100;UBERON:0002204,4.69e-22,167;UBERON:0003081,9.52e-19,203;UBERON:0000926,6.67e-14,315;UBERON:0004120,6.67e-14,315;UBERON:0006603,6.67e-14,315;UBERON:0002384,1.07e-09,371;UBERON:0002419,4.26e-07,2;UBERON:0007771,4.26e-07,2;UBERON:0003297,4.26e-07,2;UBERON:0001821,4.26e-07,2;UBERON:0003487,4.26e-07,2;UBERON:0001820,4.26e-07,2;UBERON:0005089,4.26e-07,2;UBERON:0005088,4.26e-07,2 | |||
|phase1_expression=0,0.428201047781966,0.704772020479856,0,0,0,0,1.26343974685366,0.522371256399677,0,0.697801167972428,0,0,0.123766352960047,0.994192127183747,0,0.602694528023977,0,0,0,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0.534893840235659,0.246301768349837,0.314843125254717,0,0,0.77408061658038,0,0,0.369754010166788,0.0774672005803016,0,0,0,0.802177789880567,0.217010870715852,0.447830948479849,0.32389366601898,0.257575567634187,2.76256653681173,2.64513160582167,3.63876091781724,3.48643555358527,3.28934310417461,1.54853185447552,3.16461631554365,3.33008918487831,1.41889337933151,4.48169384957604,1.93645405075148,4.06279459783025,3.76484679085209,3.82068610080984,1.57306439111559,5.81559395504715,5.1348644332175,1.91801137739712,1.9791078011203,2.79249120670285,3.40979800426155,1.7412554317715,1.13477044938228,1.86846674698672,1.7587406567972,2.60741459210101,2.38907729175628,0,1.84138817993782,1.26584954976354,0.633765858935825,1.06302149982522,0.209658645508376,0.22465726229299,0.300353785683013,0.803627933485401,0.285012743741249,0.99458338599545,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616804496998528,0,0,0,0,0.334231370655521,0.294605907474837,0,0.270803863765016,0.640456598628376,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0.604820229674197,0.534880391567015,0.144824403882799,0,0,0,0,0.50133791063589,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.261958150995425,0.364295288292542,0,0.324547393654683,0,0.26591592103773,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.506522046658319,0,0.573673241497627,0,0,0,0.98667019366864,0.622422070799533,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0.421352420106746,0,0.61417158655884,0.413303124703062,2.37600571456411,0.741800787835671,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0,0,0.427114777637135,0.211931901159562,0,0.515262646192195,0.257640540045629,0,0,0,0,0.552299391853796,0.969876340912871,0,0,0.169560592310488,0.386521706326594,0,0,0,0.132529768321485,0,0,0,0,0,1.92972281457866,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,0,1.40241773803446,0,0,0,0.982827216677626,0,0,0.491953754172454,0,0.329250856225877,0,0.301586917234893,0.277765335475589,0.325808305310325,0,0,0.115930404975077,0,0.288732895522148,0,0.190254152234598,3.95102198979638,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0,0,0,1.84901711427775,5.39053100406007,3.89123874225796,4.92345490362882,0,0,0,3.4214489204541,0.514137463516618,0,0.285826432630578,0.112131084345361,0.43596006883328,0,0.258543431515556,0,0,0.26593811658487,2.08014873822732,0,0,0.532844358032199,0,0,0,0.325736184293735,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0.479249710983165,0,1.42636905040718,0,0.205476322550383,0.179060963239896,0.112085143993527,0.394061520403854,0,0,1.01637849688985,0,0,0,0,5.24304916763028,2.99161459204025,5.38740167466846,0.12269149171914,0,0.542530047399471,0.207970861530807,0.535286966391485,0.157702415033935,0.234282829985426,0.300946099727719,0,2.0694614258501,0.664225598535437,0.184369168541703,0.434418072340414,0.391602314925481,0.343143423810856,1.03384013061444,0.862856803274467,0.320182673410333,0.606255142892519,0,0,0.744323423456331,0.153461973288062,0.841980283299221,1.28139149255701,0.511707249066704,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.232420756919918,0.846016147141356,0.601519410909855,0.0920809889358963,0.114814448164607,0.182091168006717,0.393373244878272,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0.412164046590889,0.183138929636687,0.247528499761764,1.14853107599234,1.30012049207304,0,1.06337790121334,0,0,0,0.214840489736547,0.435050081742686,0.0852266274161009,0.178064071293475,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0.616067160352178,0,0,0.37064843820784,0,0,0,0,0.255897791311334,0,0,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0.384888450902048,0,0,0.470719003883896,0.86101074534246,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0,0.648473311192717,0,0.79312517629427,0.106824071127473,0,0,0,0,0.0711418433484141,0,0.59873811429845,0,0.211673582723883,0,0.280797178113459,0,0,0,0.338583555603207,0.642352300414798,0.605399121573143,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0.66614393599564,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0.552567831062295,0.251932747854276,0.102268682502155,0.123084805461069,0.311039587661807,0.179736702294654,0.1790211746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| ||
|short_description=p10@RARA | |short_description=p10@RARA | ||
}} | }} |
Latest revision as of 01:10, 20 September 2015
Short description: | p10@RARA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RARA_5end |
Coexpression cluster: | C2404_CD14_Mast_Eosinophils_Neutrophils_Mesenchymal_Basophils_CD19 |
Association with transcript: | 63bp_to_X06538_5end |
EntrezGene: | RARA |
HGNC: | 9864 |
UniProt: | P10276 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.06e-48 | 76 |
bone element | 5.90e-44 | 82 |
hematopoietic system | 7.24e-40 | 98 |
blood island | 7.24e-40 | 98 |
skeletal element | 2.92e-39 | 90 |
immune system | 1.04e-37 | 93 |
hemolymphoid system | 2.61e-35 | 108 |
skeletal system | 1.92e-34 | 100 |
musculoskeletal system | 4.69e-22 | 167 |
lateral plate mesoderm | 9.52e-19 | 203 |
mesoderm | 6.67e-14 | 315 |
mesoderm-derived structure | 6.67e-14 | 315 |
presumptive mesoderm | 6.67e-14 | 315 |
connective tissue | 1.07e-09 | 371 |
skin gland | 4.26e-07 | 2 |
epidermis gland | 4.26e-07 | 2 |
gland of integumental system | 4.26e-07 | 2 |
sebaceous gland | 4.26e-07 | 2 |
skin sebaceous gland | 4.26e-07 | 2 |
sweat gland | 4.26e-07 | 2 |
sweat gland placode | 4.26e-07 | 2 |
sebaceous gland placode | 4.26e-07 | 2 |