FFCP PHASE1:Hg19::chr17:39280430..39280436,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83755 | |EntrezGene=83755 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16776 | |HGNC=16776 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQ66 | |UniProt=Q9BQ66 | ||
|association_with_transcript=-11bp_to_ENST00000394014,NM_031854,uc002hwa.2_5end | |association_with_transcript=-11bp_to_ENST00000394014,NM_031854,uc002hwa.2_5end | ||
|cluster_id=chr17:39280430..39280436,- | |||
|coexpression_cluster_id=C208 | |coexpression_cluster_id=C208 | ||
|description=CAGE_peak_1_at_KRTAP4-12_5end | |description=CAGE_peak_1_at_KRTAP4-12_5end | ||
|id=chr17:39280430..39280436,- | |id=chr17:39280430..39280436,- | ||
|ontology_enrichment_celltype=CL:0002334!1.22e-16!12;CL:0002620!3.79e-13!23;CL:0000055!4.05e-13!180;CL:0000057!2.09e-12!75;CL:0000359!2.29e-08!32;CL:0000192!7.68e-08!42;CL:0000514!7.68e-08!42;CL:0002582!1.46e-07!3;CL:0002580!9.29e-07!3 | |ontology_enrichment_celltype=CL:0002334!1.22e-16!12;CL:0002620!3.79e-13!23;CL:0000055!4.05e-13!180;CL:0000057!2.09e-12!75;CL:0000359!2.29e-08!32;CL:0000192!7.68e-08!42;CL:0000514!7.68e-08!42;CL:0002582!1.46e-07!3;CL:0002580!9.29e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.70e-15;23!CL:0002334;6.69e-14;12!CL:0002539;4.63e-12;10!CL:0002582;1.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.87e-15,23;CL:0002334,4.47e-14,12;CL:0000057,1.18e-12,76;CL:0002539,4.86e-12,10;CL:0002582,1.39e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.25e-08;10 | |||
|ontology_enrichment_disease=DOID:17!6.24e-11!5;DOID:450!6.24e-11!5;DOID:66!6.24e-11!5;DOID:423!6.24e-11!5;DOID:0080000!6.24e-11!5;DOID:11722!6.24e-11!5;DOID:0060084!3.69e-08!3;DOID:127!3.69e-08!3 | |ontology_enrichment_disease=DOID:17!6.24e-11!5;DOID:450!6.24e-11!5;DOID:66!6.24e-11!5;DOID:423!6.24e-11!5;DOID:0080000!6.24e-11!5;DOID:11722!6.24e-11!5;DOID:0060084!3.69e-08!3;DOID:127!3.69e-08!3 | ||
|ontology_enrichment_disease_v019=DOID:0060084;3.72e-16;3!DOID:127;3.72e-16;3!DOID:0060072;3.09e-12;4!DOID:17;2.17e-09;5!DOID:450;2.17e-09;5!DOID:66;2.17e-09;5!DOID:423;2.17e-09;5!DOID:0080000;2.17e-09;5!DOID:11722;2.17e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.64e-16,3;DOID:127,3.64e-16,3;DOID:0060072,3.04e-12,4;DOID:17,2.38e-09,5;DOID:450,2.38e-09,5;DOID:66,2.38e-09,5;DOID:423,2.38e-09,5;DOID:0080000,2.38e-09,5;DOID:11722,2.38e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!4.34e-11!45;UBERON:0002416!4.34e-11!45;UBERON:0002097!5.76e-10!40;UBERON:0001637!1.16e-07!42;UBERON:0003509!1.16e-07!42;UBERON:0004572!1.16e-07!42;UBERON:0004573!8.03e-07!33;UBERON:0004571!8.03e-07!33 | |ontology_enrichment_uberon=UBERON:0002199!4.34e-11!45;UBERON:0002416!4.34e-11!45;UBERON:0002097!5.76e-10!40;UBERON:0001637!1.16e-07!42;UBERON:0003509!1.16e-07!42;UBERON:0004572!1.16e-07!42;UBERON:0004573!8.03e-07!33;UBERON:0004571!8.03e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;4.63e-12;10!UBERON:0004695;4.63e-12;10!UBERON:0002111;4.63e-12;10!UBERON:0004178;4.63e-12;10!UBERON:0002097;1.95e-10;41!UBERON:0001135;6.02e-08;15!UBERON:0002199;7.63e-08;46!UBERON:0002416;7.63e-08;46!UBERON:0000995;3.76e-07;17!UBERON:0003975;9.78e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,7.41e-13,46;UBERON:0002416,7.41e-13,46;UBERON:0002097,3.06e-12,41;UBERON:0004237,4.86e-12,10;UBERON:0004695,4.86e-12,10;UBERON:0002111,4.86e-12,10;UBERON:0004178,4.86e-12,10;UBERON:0001135,6.22e-08,15 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,1.68203280042692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0.213557388818567,2.96704661623387,3.90118424909723,1.03052529238439,0.257640540045629,1.48893485065272,3.03797398034279,2.33848812386877,1.00973509697646,0.368199594569197,0,1.77504796258307,2.51880245569101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,1.24053903909388,0.61384789315225,0.280660094433074,0,0,1.93024705372329,1.48418066444991,3.54682295746108,0.710246901252508,0.739144404124282,1.55776328755086,4.88083589531829,0,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04299214086472,1.25924938732256,1.3940745403212,0,2.12922412126809,2.60979897622522,0.9266210955196,0,0,0,0,0,0,0,0,0,0,0,1.61745985258653,0,0,0,0.243713489631284,0,0,0.424216295861138,0,0,0.66343897524122,3.06915619677634,0,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0,0,2.12856638442359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609414446062818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11827282008889,0,1.22313785466253,0.627617077873999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25799761052228,5.18532894720761,4.57222304153173,0,0,1.87426823963964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,4.09452617362449,0,0,0,0,0,0,0,0.189403005275089,0,0,0,1.36107831386915,0,0,0.318593534327405,0,0,0,0.797525143673985,0,0,1.52322084867518,0,0,0,0.464033759878494,0.796191777397232,0,0.686791410365586,1.01024846629776,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0.308801447160972,0,0.706756583783524,0,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7614397042404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22090986463089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3746412112643,0,0,0,0,0,0,0,0,21.8569946876613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0195626881269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,1.68203280042692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0.213557388818567,2.96704661623387,3.90118424909723,1.03052529238439,0.257640540045629,1.48893485065272,3.03797398034279,2.33848812386877,1.00973509697646,0.368199594569197,0,1.77504796258307,2.51880245569101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,1.24053903909388,0.61384789315225,0.280660094433074,0,0,1.93024705372329,1.48418066444991,3.54682295746108,0.710246901252508,0.739144404124282,1.55776328755086,4.88083589531829,0,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04299214086472,1.25924938732256,1.3940745403212,0,2.12922412126809,2.60979897622522,0.9266210955196,0,0,0,0,0,0,0,0,0,0,0,1.61745985258653,0,0,0,0.243713489631284,0,0,0.424216295861138,0,0,0.66343897524122,3.06915619677634,0,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0,0,2.12856638442359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609414446062818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11827282008889,0,1.22313785466253,0.627617077873999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25799761052228,5.18532894720761,4.57222304153173,0,0,1.87426823963964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,4.09452617362449,0,0,0,0,0,0,0,0.189403005275089,0,0,0,1.36107831386915,0,0,0.318593534327405,0,0,0,0.797525143673985,0,0,1.52322084867518,0,0,0,0.464033759878494,0.796191777397232,0,0.686791410365586,1.01024846629776,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0.308801447160972,0,0.706756583783524,0,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7614397042404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22090986463089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3746412112643,0,0,0,0,0,0,0,0,21.8569946876613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0195626881269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@KRTAP4-12 | |short_description=p1@KRTAP4-12 | ||
}} | }} |
Latest revision as of 04:34, 20 September 2015
Short description: | p1@KRTAP4-12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRTAP4-12_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -11bp_to_ENST00000394014, NM_031854, uc002hwa.2_5end |
EntrezGene: | KRTAP4-12 |
HGNC: | 16776 |
UniProt: | Q9BQ66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.87e-15 | 23 |
preadipocyte | 4.47e-14 | 12 |
fibroblast | 1.18e-12 | 76 |
aortic smooth muscle cell | 4.86e-12 | 10 |
visceral preadipocyte | 1.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 7.41e-13 | 46 |
integumental system | 7.41e-13 | 46 |
skin of body | 3.06e-12 | 41 |
blood vessel smooth muscle | 4.86e-12 | 10 |
arterial system smooth muscle | 4.86e-12 | 10 |
artery smooth muscle tissue | 4.86e-12 | 10 |
aorta smooth muscle tissue | 4.86e-12 | 10 |
smooth muscle tissue | 6.22e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.64e-16 | 3 |
leiomyoma | 3.64e-16 | 3 |
benign neoplasm | 3.04e-12 | 4 |
musculoskeletal system disease | 2.38e-09 | 5 |
myotonic disease | 2.38e-09 | 5 |
muscle tissue disease | 2.38e-09 | 5 |
myopathy | 2.38e-09 | 5 |
muscular disease | 2.38e-09 | 5 |
myotonic dystrophy | 2.38e-09 | 5 |