FFCP PHASE1:Hg19::chr1:12125156..12125160,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:12125156..12125160,+ | |||
|coexpression_cluster_id=C763 | |coexpression_cluster_id=C763 | ||
|description=CAGE_peak_at_chr1:12125156..12125160,+ | |description=CAGE_peak_at_chr1:12125156..12125160,+ | ||
|id=chr1:12125156..12125160,+ | |id=chr1:12125156..12125160,+ | ||
|ontology_enrichment_celltype=CL:0000080!3.38e-13!6;CL:0000540!1.31e-12!6;CL:0000031!1.31e-12!6;CL:0000404!1.31e-12!6;CL:0000945!1.46e-11!24;CL:0000826!1.46e-11!24;CL:0001014!5.82e-11!2;CL:0001016!5.82e-11!2;CL:0000047!1.77e-09!8;CL:0000453!3.37e-09!5;CL:0000838!5.86e-09!52;CL:0000542!9.50e-09!53;CL:0000051!9.50e-09!53;CL:0000988!2.01e-07!182 | |ontology_enrichment_celltype=CL:0000080!3.38e-13!6;CL:0000540!1.31e-12!6;CL:0000031!1.31e-12!6;CL:0000404!1.31e-12!6;CL:0000945!1.46e-11!24;CL:0000826!1.46e-11!24;CL:0001014!5.82e-11!2;CL:0001016!5.82e-11!2;CL:0000047!1.77e-09!8;CL:0000453!3.37e-09!5;CL:0000838!5.86e-09!52;CL:0000542!9.50e-09!53;CL:0000051!9.50e-09!53;CL:0000988!2.01e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.91e-15;2!CL:0001016;1.91e-15;2!CL:0000945;2.56e-11;24!CL:0000453;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.54e-15,2;CL:0001016,1.54e-15,2;CL:0000945,2.35e-11,24;CL:0000826,2.35e-11,24;CL:0000838,3.45e-09,52;CL:0000542,5.04e-09,53;CL:0000051,5.04e-09,53;CL:0000988,5.65e-08,177;CL:0000453,5.38e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.42e-11!10 | |ontology_enrichment_disease=DOID:0060058!1.42e-11!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.18e-12;10!UBERON:0000178;1.39e-08;15!UBERON:0000179;1.39e-08;15!UBERON:0000463;1.39e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.37e-12,10;UBERON:0000358,2.37e-12,10;UBERON:0000307,2.37e-12,10;UBERON:0000091,2.37e-12,10;UBERON:0000087,2.37e-12,10;UBERON:0007010,2.37e-12,10;UBERON:0007806,2.37e-12,10;UBERON:0008780,2.37e-12,10;UBERON:0005728,2.37e-12,10;UBERON:0000178,1.47e-08,15;UBERON:0000179,1.47e-08,15;UBERON:0000463,1.47e-08,15 | |||
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|short_description=p@chr1:12125156..12125160,+ | |short_description=p@chr1:12125156..12125160,+ | ||
}} | }} |
Latest revision as of 20:23, 27 July 2015
Short description: | p@chr1:12125156..12125160, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:12125156..12125160, + |
Coexpression cluster: | C763_cord_B_splenic_xeroderma_b_hairy_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.54e-15 | 2 |
immature CD1a-positive Langerhans cell | 1.54e-15 | 2 |
lymphocyte of B lineage | 2.35e-11 | 24 |
pro-B cell | 2.35e-11 | 24 |
lymphoid lineage restricted progenitor cell | 3.45e-09 | 52 |
lymphocyte | 5.04e-09 | 53 |
common lymphoid progenitor | 5.04e-09 | 53 |
hematopoietic cell | 5.65e-08 | 177 |
Langerhans cell | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.37e-12 | 10 |
blastocyst | 2.37e-12 | 10 |
blastula | 2.37e-12 | 10 |
bilaminar disc | 2.37e-12 | 10 |
inner cell mass | 2.37e-12 | 10 |
cleaving embryo | 2.37e-12 | 10 |
connecting stalk | 2.37e-12 | 10 |
inner cell mass derived epiblast | 2.37e-12 | 10 |
extraembryonic mesoderm | 2.37e-12 | 10 |
blood | 1.47e-08 | 15 |
haemolymphatic fluid | 1.47e-08 | 15 |
organism substance | 1.47e-08 | 15 |