FFCP PHASE1:Hg19::chr1:164600535..164600539,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:164600535..164600539,+ | |||
|coexpression_cluster_id=C2538 | |coexpression_cluster_id=C2538 | ||
|description=CAGE_peak_at_chr1:164600535..164600539,+ | |description=CAGE_peak_at_chr1:164600535..164600539,+ | ||
|id=chr1:164600535..164600539,+ | |id=chr1:164600535..164600539,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.76e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.73e-23!115;UBERON:0001017!5.14e-20!82;UBERON:0005743!5.76e-20!86;UBERON:0000073!3.74e-19!94;UBERON:0001016!3.74e-19!94;UBERON:0002346!1.22e-17!90;UBERON:0000955!4.49e-17!69;UBERON:0006238!4.49e-17!69;UBERON:0001049!6.96e-17!57;UBERON:0005068!6.96e-17!57;UBERON:0006241!6.96e-17!57;UBERON:0007135!6.96e-17!57;UBERON:0003075!1.78e-16!86;UBERON:0007284!1.78e-16!86;UBERON:0002616!3.73e-16!59;UBERON:0002020!1.11e-15!34;UBERON:0003528!1.11e-15!34;UBERON:0002791!1.57e-15!33;UBERON:0001893!1.66e-15!34;UBERON:0000924!1.99e-15!173;UBERON:0006601!1.99e-15!173;UBERON:0002780!2.81e-15!41;UBERON:0001890!2.81e-15!41;UBERON:0006240!2.81e-15!41;UBERON:0003080!1.34e-14!42;UBERON:0001869!1.93e-14!32;UBERON:0004121!2.07e-14!169;UBERON:0000153!1.55e-13!129;UBERON:0007811!1.55e-13!129;UBERON:0000033!2.25e-13!123;UBERON:0000956!6.79e-13!25;UBERON:0000203!6.79e-13!25;UBERON:0003056!4.15e-12!61;UBERON:0002619!1.80e-11!22;UBERON:0001950!4.75e-10!20;UBERON:0000062!1.76e-07!511;UBERON:0000475!2.94e-07!365 | |ontology_enrichment_uberon=UBERON:0007023!2.73e-23!115;UBERON:0001017!5.14e-20!82;UBERON:0005743!5.76e-20!86;UBERON:0000073!3.74e-19!94;UBERON:0001016!3.74e-19!94;UBERON:0002346!1.22e-17!90;UBERON:0000955!4.49e-17!69;UBERON:0006238!4.49e-17!69;UBERON:0001049!6.96e-17!57;UBERON:0005068!6.96e-17!57;UBERON:0006241!6.96e-17!57;UBERON:0007135!6.96e-17!57;UBERON:0003075!1.78e-16!86;UBERON:0007284!1.78e-16!86;UBERON:0002616!3.73e-16!59;UBERON:0002020!1.11e-15!34;UBERON:0003528!1.11e-15!34;UBERON:0002791!1.57e-15!33;UBERON:0001893!1.66e-15!34;UBERON:0000924!1.99e-15!173;UBERON:0006601!1.99e-15!173;UBERON:0002780!2.81e-15!41;UBERON:0001890!2.81e-15!41;UBERON:0006240!2.81e-15!41;UBERON:0003080!1.34e-14!42;UBERON:0001869!1.93e-14!32;UBERON:0004121!2.07e-14!169;UBERON:0000153!1.55e-13!129;UBERON:0007811!1.55e-13!129;UBERON:0000033!2.25e-13!123;UBERON:0000956!6.79e-13!25;UBERON:0000203!6.79e-13!25;UBERON:0003056!4.15e-12!61;UBERON:0002619!1.80e-11!22;UBERON:0001950!4.75e-10!20;UBERON:0000062!1.76e-07!511;UBERON:0000475!2.94e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.39e-13;22!UBERON:0006947;3.64e-13;3!UBERON:0004054;3.64e-13;3!UBERON:0001950;1.32e-11;20!UBERON:0000956;1.74e-11;25!UBERON:0000203;1.74e-11;25!UBERON:0000922;1.96e-10;49!UBERON:0001869;1.97e-10;32!UBERON:0002791;4.90e-10;32!UBERON:0005904;5.45e-10;4!UBERON:0003528;1.27e-09;34!UBERON:0002020;1.27e-09;34!UBERON:0001893;2.77e-08;34!UBERON:0001872;3.59e-08;5!UBERON:0002780;5.11e-07;41!UBERON:0001890;5.11e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.32e-13,3;UBERON:0004054,2.32e-13,3;UBERON:0002619,3.92e-13,22;UBERON:0001950,1.80e-11,20;UBERON:0000956,1.98e-11,25;UBERON:0000203,1.98e-11,25;UBERON:0002791,1.14e-10,32;UBERON:0001869,1.14e-10,32;UBERON:0005904,3.91e-10,4;UBERON:0003528,5.95e-10,34;UBERON:0002020,5.95e-10,34;UBERON:0001893,5.95e-10,34;UBERON:0007023,8.72e-10,114;UBERON:0001872,4.28e-08,5;UBERON:0002780,5.56e-08,41;UBERON:0001890,5.56e-08,41;UBERON:0003080,5.56e-08,41;UBERON:0006240,5.56e-08,41;UBERON:0002346,2.54e-07,86;UBERON:0003056,4.87e-07,61 | |||
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|short_description=p@chr1:164600535..164600539,+ | |short_description=p@chr1:164600535..164600539,+ | ||
}} | }} |
Latest revision as of 23:53, 27 July 2015
Short description: | p@chr1:164600535..164600539, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:164600535..164600539, + |
Coexpression cluster: | C2538_parietal_occipital_uterus_cervix_rectum_brain_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.32e-13 | 3 |
internal male genitalia | 2.32e-13 | 3 |
regional part of cerebral cortex | 3.92e-13 | 22 |
neocortex | 1.80e-11 | 20 |
cerebral cortex | 1.98e-11 | 25 |
pallium | 1.98e-11 | 25 |
regional part of telencephalon | 1.14e-10 | 32 |
cerebral hemisphere | 1.14e-10 | 32 |
duct of male reproductive system | 3.91e-10 | 4 |
brain grey matter | 5.95e-10 | 34 |
gray matter | 5.95e-10 | 34 |
telencephalon | 5.95e-10 | 34 |
adult organism | 8.72e-10 | 114 |
parietal lobe | 4.28e-08 | 5 |
regional part of forebrain | 5.56e-08 | 41 |
forebrain | 5.56e-08 | 41 |
anterior neural tube | 5.56e-08 | 41 |
future forebrain | 5.56e-08 | 41 |
neurectoderm | 2.54e-07 | 86 |
pre-chordal neural plate | 4.87e-07 | 61 |