FFCP PHASE1:Hg19::chr1:183213249..183213267,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:183213249..183213267,+ | |||
|coexpression_cluster_id=C362 | |coexpression_cluster_id=C362 | ||
|description=CAGE_peak_at_chr1:183213249..183213267,+ | |description=CAGE_peak_at_chr1:183213249..183213267,+ | ||
|id=chr1:183213249..183213267,+ | |id=chr1:183213249..183213267,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.19e-30!254;CL:0002076!1.04e-25!43;CL:0000223!3.50e-18!59;CL:0002368!2.69e-13!13;CL:0002251!2.70e-10!21;CL:0000244!5.75e-10!4;CL:0000731!5.75e-10!4;CL:0000220!1.27e-08!246;CL:0002321!1.86e-08!248;CL:0002621!3.86e-08!3;CL:0000150!7.22e-08!9;CL:0002159!1.01e-07!13;CL:0000622!3.68e-07!5;CL:0002623!4.16e-07!3 | |ontology_enrichment_celltype=CL:0000066!1.19e-30!254;CL:0002076!1.04e-25!43;CL:0000223!3.50e-18!59;CL:0002368!2.69e-13!13;CL:0002251!2.70e-10!21;CL:0000244!5.75e-10!4;CL:0000731!5.75e-10!4;CL:0000220!1.27e-08!246;CL:0002321!1.86e-08!248;CL:0002621!3.86e-08!3;CL:0000150!7.22e-08!9;CL:0002159!1.01e-07!13;CL:0000622!3.68e-07!5;CL:0002623!4.16e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002621;2.25e-26;3!CL:0002076;2.80e-25;42!CL:0002368;5.97e-23;13!CL:0000244;2.67e-19;4!CL:0000731;2.67e-19;4!CL:0002536;2.22e-17;2!CL:0002231;3.27e-12;3!CL:0002166;3.87e-12;3!CL:0002159;1.10e-09;14!CL:0000312;1.71e-07;5!CL:0002251;5.56e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.16e-27,42;CL:0002621,2.68e-26,3;CL:0002368,3.56e-23,13;CL:0000244,1.67e-19,4;CL:0000731,1.67e-19,4;CL:0000223,5.95e-19,58;CL:0002536,3.98e-17,2;CL:0000066,1.80e-15,253;CL:0002166,3.99e-12,3;CL:0002231,4.46e-12,3;CL:0002159,1.30e-09,14;CL:0000312,2.16e-07,5;CL:0002251,5.65e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;5.66e-10;58 | |||
|ontology_enrichment_disease=DOID:305!5.92e-07!106 | |ontology_enrichment_disease=DOID:305!5.92e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!1.91e-11!5;UBERON:0005910!1.91e-09!6;UBERON:0001004!1.05e-08!72;UBERON:0001949!3.86e-08!3;UBERON:0004119!5.47e-08!169;UBERON:0000925!5.47e-08!169;UBERON:0006595!5.47e-08!169;UBERON:0005911!9.72e-08!82;UBERON:0004807!7.79e-07!28 | |ontology_enrichment_uberon=UBERON:0000365!1.91e-11!5;UBERON:0005910!1.91e-09!6;UBERON:0001004!1.05e-08!72;UBERON:0001949!3.86e-08!3;UBERON:0004119!5.47e-08!169;UBERON:0000925!5.47e-08!169;UBERON:0006595!5.47e-08!169;UBERON:0005911!9.72e-08!82;UBERON:0004807!7.79e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.25e-26;3!UBERON:0000486;7.09e-25;12!UBERON:0000365;1.46e-15;5!UBERON:0005910;4.58e-13;6!UBERON:0003929;1.22e-11;7!UBERON:0003350;3.00e-10;8!UBERON:0001828;3.00e-10;8!UBERON:0004913;1.48e-09;1!UBERON:0003703;1.48e-09;1!UBERON:0001174;1.48e-09;1!UBERON:0004914;1.48e-09;1!UBERON:0001708;2.51e-09;4!UBERON:0008895;2.51e-09;4!UBERON:0005911;3.91e-08;36!UBERON:0011159;1.25e-07;5!UBERON:0000161;2.42e-07;19!UBERON:0000166;2.42e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.68e-26,3;UBERON:0000365,1.00e-15,5;UBERON:0005910,3.36e-13,6;UBERON:0004119,1.46e-10,160;UBERON:0000925,1.46e-10,160;UBERON:0006595,1.46e-10,160;UBERON:0003350,3.20e-10,8;UBERON:0001828,3.20e-10,8;UBERON:0001004,6.65e-10,74;UBERON:0004913,1.91e-09,1;UBERON:0003703,1.91e-09,1;UBERON:0001174,1.91e-09,1;UBERON:0004914,1.91e-09,1;UBERON:0001708,2.57e-09,4;UBERON:0008895,2.57e-09,4;UBERON:0005911,1.18e-08,82;UBERON:0000161,5.72e-08,36;UBERON:0011159,1.27e-07,5;UBERON:0003102,7.54e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,1.52908960491121,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,1.8072355126695,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31913023795956,2.18196896472668,4.01526433544605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.98775256867763,1.1240175325762,1.40740561376283,0.462942225792648,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,2.68771405118175,1.41775097242386,0.358234090811393,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80962293576241,1.10497186723076,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,3.14041339185858,5.95789208831829,7.78437546216963,1.71968227454435,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82822014178473,0.670302275535787,0,0.188287601553558,0.86101074534246,1.68471475667626,1.7737206141467,2.75668080248351,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.293977192243133,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0.160317640503067,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0.77380195455795,0,0,0,0,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.699397538597222,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,1.33070477595341,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,1.65772931330429,0.17071847709395,0.691259661814092,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr1:183213249..183213267,+ | |short_description=p@chr1:183213249..183213267,+ | ||
}} | }} |
Latest revision as of 01:11, 28 July 2015
Short description: | p@chr1:183213249..183213267, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183213249..183213267, + |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.16e-27 | 42 |
gingival epithelial cell | 2.68e-26 | 3 |
respiratory epithelial cell | 3.56e-23 | 13 |
transitional epithelial cell | 1.67e-19 | 4 |
urothelial cell | 1.67e-19 | 4 |
endodermal cell | 5.95e-19 | 58 |
amniotic epithelial cell | 3.98e-17 | 2 |
epithelial cell | 1.80e-15 | 253 |
epithelial cell of Malassez | 3.99e-12 | 3 |
epithelial cell of prostate | 4.46e-12 | 3 |
general ecto-epithelial cell | 1.30e-09 | 14 |
keratinocyte | 2.16e-07 | 5 |
epithelial cell of alimentary canal | 5.65e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.68e-26 | 3 |
urothelium | 1.00e-15 | 5 |
transitional epithelium | 3.36e-13 | 6 |
endoderm-derived structure | 1.46e-10 | 160 |
endoderm | 1.46e-10 | 160 |
presumptive endoderm | 1.46e-10 | 160 |
epithelium of mucosa | 3.20e-10 | 8 |
gingiva | 3.20e-10 | 8 |
respiratory system | 6.65e-10 | 74 |
hepatopancreatic ampulla | 1.91e-09 | 1 |
extrahepatic bile duct | 1.91e-09 | 1 |
common bile duct | 1.91e-09 | 1 |
duodenal papilla | 1.91e-09 | 1 |
jaw skeleton | 2.57e-09 | 4 |
splanchnocranium | 2.57e-09 | 4 |
endo-epithelium | 1.18e-08 | 82 |
orifice | 5.72e-08 | 36 |
primary subdivision of cranial skeletal system | 1.27e-07 | 5 |
surface structure | 7.54e-07 | 99 |