FFCP PHASE1:Hg19::chr1:201334789..201334802,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7139 | |EntrezGene=7139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11949 | |HGNC=11949 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-435bp_to_ENST00000479297_5end | |association_with_transcript=-435bp_to_ENST00000479297_5end | ||
|cluster_id=chr1:201334789..201334802,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_8_at_TNNT2_5end | |description=CAGE_peak_8_at_TNNT2_5end | ||
|id=chr1:201334789..201334802,- | |id=chr1:201334789..201334802,- | ||
|ontology_enrichment_celltype=CL:0000188!3.49e-19!9;CL:0000594!2.76e-07!3 | |ontology_enrichment_celltype=CL:0000188!3.49e-19!9;CL:0000594!2.76e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002575;8.32e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,9.19e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.02e-30;4!UBERON:0007284;2.02e-30;4!UBERON:0010227;5.42e-15;1!UBERON:0010226;6.22e-15;1!UBERON:0004140;1.23e-14;1!UBERON:0000358;1.61e-14;1!UBERON:0006603;3.54e-07;65!UBERON:0003104;5.04e-07;31 | |||
|ontology_enrichment_disease=DOID:114!1.03e-11!2 | |ontology_enrichment_disease=DOID:114!1.03e-11!2 | ||
|ontology_enrichment_disease_v019=DOID:114;4.73e-28;2!DOID:178;8.17e-15;1!DOID:326;8.17e-15;1!DOID:3978;8.17e-15;1!DOID:3394;8.17e-15;1!DOID:5844;8.17e-15;1!DOID:1287;1.51e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.73e-28,2;DOID:178,8.17e-15,1;DOID:326,8.17e-15,1;DOID:3978,8.17e-15,1;DOID:3394,8.17e-15,1;DOID:5844,8.17e-15,1;DOID:1287,1.51e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!1.69e-16!3;UBERON:0003978!2.18e-16!3;UBERON:0009751!2.18e-16!3;UBERON:0000946!2.18e-16!3;UBERON:0002523!2.18e-16!3;UBERON:0005983!2.18e-16!3;UBERON:0002165!2.18e-16!3;UBERON:0002062!2.18e-16!3;UBERON:0007280!2.18e-16!3;UBERON:0007100!2.92e-14!27;UBERON:0002081!1.63e-11!2;UBERON:0002133!2.01e-11!2;UBERON:0000341!7.45e-11!2;UBERON:0003103!9.26e-10!69;UBERON:0000948!2.56e-07!24;UBERON:0005498!2.56e-07!24;UBERON:0004140!2.56e-07!24;UBERON:0009881!2.56e-07!24;UBERON:0004141!2.56e-07!24;UBERON:0003084!2.56e-07!24;UBERON:0007005!2.56e-07!24;UBERON:0004139!2.56e-07!24;UBERON:0004291!2.56e-07!24 | |ontology_enrichment_uberon=UBERON:0004151!1.69e-16!3;UBERON:0003978!2.18e-16!3;UBERON:0009751!2.18e-16!3;UBERON:0000946!2.18e-16!3;UBERON:0002523!2.18e-16!3;UBERON:0005983!2.18e-16!3;UBERON:0002165!2.18e-16!3;UBERON:0002062!2.18e-16!3;UBERON:0007280!2.18e-16!3;UBERON:0007100!2.92e-14!27;UBERON:0002081!1.63e-11!2;UBERON:0002133!2.01e-11!2;UBERON:0000341!7.45e-11!2;UBERON:0003103!9.26e-10!69;UBERON:0000948!2.56e-07!24;UBERON:0005498!2.56e-07!24;UBERON:0004140!2.56e-07!24;UBERON:0009881!2.56e-07!24;UBERON:0004141!2.56e-07!24;UBERON:0003084!2.56e-07!24;UBERON:0007005!2.56e-07!24;UBERON:0004139!2.56e-07!24;UBERON:0004291!2.56e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.57e-42;25!UBERON:0004151;1.40e-40;3!UBERON:0003978;2.74e-40;3!UBERON:0000946;2.74e-40;3!UBERON:0002081;1.71e-27;2!UBERON:0002133;2.92e-27;2!UBERON:0000948;1.39e-21;22!UBERON:0002079;5.42e-15;1!UBERON:0002084;6.22e-15;1!UBERON:0002082;6.22e-15;1!UBERON:0002146;7.13e-15;1!UBERON:0005623;7.13e-15;1!UBERON:0002135;9.36e-15;1!UBERON:0007029;2.57e-14;1!UBERON:0002134;2.57e-14;1!UBERON:0005208;2.57e-14;1!UBERON:0004145;2.57e-14;1!UBERON:0005946;2.57e-14;1!UBERON:0005965;2.57e-14;1!UBERON:0002078;2.57e-14;1!UBERON:0010313;1.41e-12;10!UBERON:0003103;1.12e-08;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.31e-40,3;UBERON:0003978,2.56e-40,3;UBERON:0009751,2.56e-40,3;UBERON:0000946,2.56e-40,3;UBERON:0002523,2.56e-40,3;UBERON:0005983,2.56e-40,3;UBERON:0002165,2.56e-40,3;UBERON:0002062,2.56e-40,3;UBERON:0007280,2.56e-40,3;UBERON:0007100,3.89e-39,27;UBERON:0002081,1.60e-27,2;UBERON:0010227,1.60e-27,2;UBERON:0002133,2.74e-27,2;UBERON:0000948,8.93e-20,24;UBERON:0005498,8.93e-20,24;UBERON:0004140,8.93e-20,24;UBERON:0009881,8.93e-20,24;UBERON:0004141,8.93e-20,24;UBERON:0003084,8.93e-20,24;UBERON:0007005,8.93e-20,24;UBERON:0004139,8.93e-20,24;UBERON:0004291,8.93e-20,24;UBERON:0004797,1.04e-17,7;UBERON:0003103,5.02e-15,68;UBERON:0002079,5.42e-15,1;UBERON:0002084,6.22e-15,1;UBERON:0002082,6.22e-15,1;UBERON:0010226,6.22e-15,1;UBERON:0002146,7.13e-15,1;UBERON:0005623,7.13e-15,1;UBERON:0002135,9.36e-15,1;UBERON:0007029,2.11e-14,1;UBERON:0002134,2.41e-14,1;UBERON:0005208,2.41e-14,1;UBERON:0005946,2.41e-14,1;UBERON:0005965,2.41e-14,1;UBERON:0002078,2.41e-14,1;UBERON:0010313,1.38e-12,10;UBERON:0002342,1.38e-12,10;UBERON:0005062,1.38e-12,10;UBERON:0001009,9.77e-09,112;UBERON:0007023,9.25e-07,114 | |||
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|short_description=p8@TNNT2 | |short_description=p8@TNNT2 | ||
}} | }} |
Latest revision as of 17:31, 19 September 2015
Short description: | p8@TNNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -435bp_to_ENST00000479297_5end |
EntrezGene: | TNNT2 |
HGNC: | 11949 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.73e-28 | 2 |
vascular disease | 8.17e-15 | 1 |
ischemia | 8.17e-15 | 1 |
extrinsic cardiomyopathy | 8.17e-15 | 1 |
myocardial ischemia | 8.17e-15 | 1 |
myocardial infarction | 8.17e-15 | 1 |
cardiovascular system disease | 1.51e-14 | 4 |