FFCP PHASE1:Hg19::chr20:48429233..48429257,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23315 | |EntrezGene=23315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20728 | |HGNC=20728 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2E8 | |UniProt=Q9Y2E8 | ||
|association_with_transcript=0bp_to_ENST00000417961,NM_015266,uc002xuv.1,uc010gib.1,uc010zyj.1,uc010zyk.1,uc010zyl.1,uc010zym.1_5end | |association_with_transcript=0bp_to_ENST00000417961,NM_015266,uc002xuv.1,uc010gib.1,uc010zyj.1,uc010zyk.1,uc010zyl.1,uc010zym.1_5end | ||
|cluster_id=chr20:48429233..48429257,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_3_at_SLC9A8_5end | |description=CAGE_peak_3_at_SLC9A8_5end | ||
|id=chr20:48429233..48429257,+ | |id=chr20:48429233..48429257,+ | ||
|ontology_enrichment_celltype=CL:0000766!7.83e-29!76;CL:0002057!1.16e-28!42;CL:0000860!6.64e-28!45;CL:0000738!8.26e-28!140;CL:0000557!6.06e-25!71;CL:0002009!2.81e-22!65;CL:0000839!9.64e-22!70;CL:0002194!3.29e-21!63;CL:0000576!3.29e-21!63;CL:0000040!3.29e-21!63;CL:0000559!3.29e-21!63;CL:0002031!1.56e-19!124;CL:0002087!1.21e-18!119;CL:0000037!1.66e-17!172;CL:0000566!1.66e-17!172;CL:0000763!5.59e-16!112;CL:0000049!5.59e-16!112;CL:0000988!1.56e-15!182;CL:0002032!1.62e-15!165;CL:0000837!1.62e-15!165;CL:0000063!1.03e-07!578;CL:0002393!2.43e-07!9;CL:0002397!2.43e-07!9;CL:0000094!3.28e-07!8;CL:0000134!8.71e-07!358 | |ontology_enrichment_celltype=CL:0000766!7.83e-29!76;CL:0002057!1.16e-28!42;CL:0000860!6.64e-28!45;CL:0000738!8.26e-28!140;CL:0000557!6.06e-25!71;CL:0002009!2.81e-22!65;CL:0000839!9.64e-22!70;CL:0002194!3.29e-21!63;CL:0000576!3.29e-21!63;CL:0000040!3.29e-21!63;CL:0000559!3.29e-21!63;CL:0002031!1.56e-19!124;CL:0002087!1.21e-18!119;CL:0000037!1.66e-17!172;CL:0000566!1.66e-17!172;CL:0000763!5.59e-16!112;CL:0000049!5.59e-16!112;CL:0000988!1.56e-15!182;CL:0002032!1.62e-15!165;CL:0000837!1.62e-15!165;CL:0000063!1.03e-07!578;CL:0002393!2.43e-07!9;CL:0002397!2.43e-07!9;CL:0000094!3.28e-07!8;CL:0000134!8.71e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.01e-54;33!CL:0002057;3.01e-54;33!CL:0000576;5.33e-40;48!CL:0000473;2.25e-39;39!CL:0000234;2.25e-39;39!CL:0000766;1.99e-33;69!CL:0000094;5.54e-17;8!CL:0002087;1.18e-16;104!CL:0000763;5.47e-15;100!CL:0000738;9.01e-14;136!CL:0002393;1.37e-12;6!CL:0002397;1.37e-12;6!CL:0000081;7.85e-12;11!CL:0000988;9.49e-10;177!CL:0000775;1.30e-07;3!CL:0000767;5.11e-07;3!CL:0000219;9.44e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.35e-76,42;CL:0002057,2.35e-76,42;CL:0000766,3.64e-69,72;CL:0000473,4.50e-68,48;CL:0000234,4.50e-68,48;CL:0000738,2.10e-66,136;CL:0000557,1.27e-58,67;CL:0002009,1.56e-54,61;CL:0000037,9.96e-53,168;CL:0000839,2.76e-52,66;CL:0002194,1.34e-51,59;CL:0000576,1.34e-51,59;CL:0000040,1.34e-51,59;CL:0000559,1.34e-51,59;CL:0000988,6.07e-49,177;CL:0000763,1.44e-47,108;CL:0000049,1.44e-47,108;CL:0002031,2.66e-47,120;CL:0002087,2.85e-46,115;CL:0002032,3.88e-46,161;CL:0000837,3.88e-46,161;CL:0000134,6.80e-21,354;CL:0002320,4.77e-20,361;CL:0000219,1.59e-18,386;CL:0002393,2.08e-17,9;CL:0002397,2.08e-17,9;CL:0000094,4.75e-17,8;CL:0000034,6.65e-15,441;CL:0000048,9.99e-15,427;CL:0000723,3.29e-14,433;CL:0000081,7.04e-12,11;CL:0000775,1.21e-07,3;CL:0000767,4.68e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.92e-54;42!CL:0000049;2.97e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.61e-23!80;UBERON:0002390!7.88e-23!102;UBERON:0003061!7.88e-23!102;UBERON:0002193!1.17e-22!112;UBERON:0001474!3.63e-20!86;UBERON:0002405!6.91e-18!115;UBERON:0004765!2.75e-17!101;UBERON:0001434!2.75e-17!101;UBERON:0003081!5.11e-11!216;UBERON:0002204!2.93e-08!167 | |ontology_enrichment_uberon=UBERON:0002371!2.61e-23!80;UBERON:0002390!7.88e-23!102;UBERON:0003061!7.88e-23!102;UBERON:0002193!1.17e-22!112;UBERON:0001474!3.63e-20!86;UBERON:0002405!6.91e-18!115;UBERON:0004765!2.75e-17!101;UBERON:0001434!2.75e-17!101;UBERON:0003081!5.11e-11!216;UBERON:0002204!2.93e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.52e-54,76;UBERON:0001474,3.16e-49,82;UBERON:0002390,3.24e-46,98;UBERON:0003061,3.24e-46,98;UBERON:0004765,1.75e-43,90;UBERON:0002405,2.31e-43,93;UBERON:0002193,4.65e-42,108;UBERON:0001434,1.33e-37,100;UBERON:0003081,7.82e-20,203;UBERON:0002384,1.15e-19,371;UBERON:0002204,2.27e-18,167;UBERON:0000926,3.74e-09,315;UBERON:0004120,3.74e-09,315;UBERON:0006603,3.74e-09,315 | |||
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|short_description=p3@SLC9A8 | |short_description=p3@SLC9A8 | ||
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Latest revision as of 20:06, 16 September 2015
Short description: | p3@SLC9A8 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC9A8_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000417961, NM_015266, uc002xuv.1, uc010gib.1, uc010zyj.1, uc010zyk.1, uc010zyl.1, uc010zym.1_5end |
EntrezGene: | SLC9A8 |
HGNC: | 20728 |
UniProt: | Q9Y2E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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bone marrow | 2.52e-54 | 76 |
bone element | 3.16e-49 | 82 |
hematopoietic system | 3.24e-46 | 98 |
blood island | 3.24e-46 | 98 |
skeletal element | 1.75e-43 | 90 |
immune system | 2.31e-43 | 93 |
hemolymphoid system | 4.65e-42 | 108 |
skeletal system | 1.33e-37 | 100 |
lateral plate mesoderm | 7.82e-20 | 203 |
connective tissue | 1.15e-19 | 371 |
musculoskeletal system | 2.27e-18 | 167 |
mesoderm | 3.74e-09 | 315 |
mesoderm-derived structure | 3.74e-09 | 315 |
presumptive mesoderm | 3.74e-09 | 315 |