FFCP PHASE1:Hg19::chr2:69026957..69026966,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:69026957..69026966,+ | |||
|coexpression_cluster_id=C1740 | |coexpression_cluster_id=C1740 | ||
|description=CAGE_peak_at_chr2:69026957..69026966,+ | |description=CAGE_peak_at_chr2:69026957..69026966,+ | ||
|id=chr2:69026957..69026966,+ | |id=chr2:69026957..69026966,+ | ||
|ontology_enrichment_celltype=CL:0002159!2.04e-25!13;CL:0002076!2.39e-18!43;CL:0002621!1.07e-17!3;CL:0002166!1.11e-16!3;CL:0000223!8.25e-15!59;CL:0000240!1.49e-14!6;CL:0000311!1.49e-14!6;CL:0000079!1.49e-14!6;CL:0000237!1.49e-14!6;CL:0000036!1.49e-14!6;CL:0000357!1.49e-14!6;CL:0000114!1.49e-14!6;CL:0002368!2.30e-14!13;CL:0002327!2.12e-13!4;CL:0000066!6.98e-13!254;CL:0002077!9.91e-12!33;CL:0000362!3.76e-11!8;CL:0000312!2.54e-10!5;CL:0002202!7.87e-10!9;CL:0002632!7.87e-10!9;CL:0002251!8.48e-09!21;CL:0000068!3.08e-08!3;CL:0000069!3.08e-08!3;CL:0000307!3.08e-08!3;CL:0000377!3.08e-08!3;CL:0002328!3.95e-08!3;CL:0000220!3.03e-07!246;CL:0002321!3.79e-07!248;CL:0000221!8.69e-07!71 | |ontology_enrichment_celltype=CL:0002159!2.04e-25!13;CL:0002076!2.39e-18!43;CL:0002621!1.07e-17!3;CL:0002166!1.11e-16!3;CL:0000223!8.25e-15!59;CL:0000240!1.49e-14!6;CL:0000311!1.49e-14!6;CL:0000079!1.49e-14!6;CL:0000237!1.49e-14!6;CL:0000036!1.49e-14!6;CL:0000357!1.49e-14!6;CL:0000114!1.49e-14!6;CL:0002368!2.30e-14!13;CL:0002327!2.12e-13!4;CL:0000066!6.98e-13!254;CL:0002077!9.91e-12!33;CL:0000362!3.76e-11!8;CL:0000312!2.54e-10!5;CL:0002202!7.87e-10!9;CL:0002632!7.87e-10!9;CL:0002251!8.48e-09!21;CL:0000068!3.08e-08!3;CL:0000069!3.08e-08!3;CL:0000307!3.08e-08!3;CL:0000377!3.08e-08!3;CL:0002328!3.95e-08!3;CL:0000220!3.03e-07!246;CL:0002321!3.79e-07!248;CL:0000221!8.69e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002327;6.17e-64;4!CL:0002621;2.18e-38;3!CL:0000317;1.91e-15;2!CL:1000448;1.91e-15;2!CL:0002308;1.91e-15;2!CL:0002140;1.91e-15;2!CL:0000362;1.49e-13;9!CL:0002159;4.56e-09;14!CL:0000312;5.86e-07;5!CL:0000622;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.46e-63,4;CL:0002621,1.23e-38,3;CL:0000317,2.05e-15,2;CL:1000448,2.05e-15,2;CL:0002308,2.05e-15,2;CL:0002140,2.05e-15,2;CL:0000362,1.40e-13,9;CL:0002159,4.38e-09,14;CL:0000312,5.38e-07,5;CL:0000622,6.04e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.07e-17!3;UBERON:0001911!2.12e-13!4;UBERON:0005333!2.12e-13!4;UBERON:0008425!2.12e-13!4;UBERON:0005311!2.12e-13!4;UBERON:0001708!1.21e-12!4;UBERON:0001704!1.21e-12!4;UBERON:0001004!1.68e-11!72;UBERON:0000161!1.15e-10!35;UBERON:0003102!2.33e-09!95;UBERON:0007196!2.40e-09!14;UBERON:0001558!2.40e-09!14;UBERON:0000166!1.02e-08!21;UBERON:0002090!1.38e-08!6;UBERON:0000165!1.56e-08!28;UBERON:0000930!1.56e-08!28;UBERON:0004815!3.95e-08!3;UBERON:0002031!3.95e-08!3;UBERON:0004119!4.98e-08!169;UBERON:0000925!4.98e-08!169;UBERON:0006595!4.98e-08!169;UBERON:0005153!5.16e-08!37;UBERON:0003126!2.32e-07!7;UBERON:0001005!2.32e-07!7;UBERON:0005157!5.97e-07!51;UBERON:0001828!6.61e-07!8;UBERON:0000076!6.61e-07!8 | |ontology_enrichment_uberon=UBERON:0001949!1.07e-17!3;UBERON:0001911!2.12e-13!4;UBERON:0005333!2.12e-13!4;UBERON:0008425!2.12e-13!4;UBERON:0005311!2.12e-13!4;UBERON:0001708!1.21e-12!4;UBERON:0001704!1.21e-12!4;UBERON:0001004!1.68e-11!72;UBERON:0000161!1.15e-10!35;UBERON:0003102!2.33e-09!95;UBERON:0007196!2.40e-09!14;UBERON:0001558!2.40e-09!14;UBERON:0000166!1.02e-08!21;UBERON:0002090!1.38e-08!6;UBERON:0000165!1.56e-08!28;UBERON:0000930!1.56e-08!28;UBERON:0004815!3.95e-08!3;UBERON:0002031!3.95e-08!3;UBERON:0004119!4.98e-08!169;UBERON:0000925!4.98e-08!169;UBERON:0006595!4.98e-08!169;UBERON:0005153!5.16e-08!37;UBERON:0003126!2.32e-07!7;UBERON:0001005!2.32e-07!7;UBERON:0005157!5.97e-07!51;UBERON:0001828!6.61e-07!8;UBERON:0000076!6.61e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;6.17e-64;4!UBERON:0001949;2.18e-38;3!UBERON:0003929;4.02e-17;7!UBERON:0002419;1.91e-15;2!UBERON:0007771;1.91e-15;2!UBERON:0003297;1.91e-15;2!UBERON:0001821;1.91e-15;2!UBERON:0003487;1.91e-15;2!UBERON:0001820;1.91e-15;2!UBERON:0003350;4.07e-15;8!UBERON:0001828;4.07e-15;8!UBERON:0010371;6.39e-15;31!UBERON:0002365;2.46e-14;31!UBERON:0002330;2.46e-14;31!UBERON:0000486;2.03e-10;12!UBERON:0003729;1.08e-09;13!UBERON:0001003;1.59e-08;15!UBERON:0007376;1.59e-08;15!UBERON:0000161;6.38e-07;19!UBERON:0000166;6.38e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.46e-63,4;UBERON:0005333,1.46e-63,4;UBERON:0008425,1.46e-63,4;UBERON:0005311,1.46e-63,4;UBERON:0001949,1.23e-38,3;UBERON:0000076,2.71e-32,8;UBERON:0002419,2.05e-15,2;UBERON:0007771,2.05e-15,2;UBERON:0003297,2.05e-15,2;UBERON:0001821,2.05e-15,2;UBERON:0003487,2.05e-15,2;UBERON:0001820,2.05e-15,2;UBERON:0005089,2.05e-15,2;UBERON:0005088,2.05e-15,2;UBERON:0003350,3.29e-15,8;UBERON:0001828,3.29e-15,8;UBERON:0002365,4.66e-15,31;UBERON:0005085,4.66e-15,31;UBERON:0002330,4.66e-15,31;UBERON:0010371,2.04e-13,104;UBERON:0003729,9.51e-10,13;UBERON:0001003,1.53e-08,15;UBERON:0007376,1.53e-08,15;UBERON:0007383,1.53e-08,15;UBERON:0004121,3.72e-08,171;UBERON:0000924,3.72e-08,171;UBERON:0006601,3.72e-08,171;UBERON:0002530,3.84e-08,59;UBERON:0005153,1.43e-07,37;UBERON:0003100,6.81e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,1.36373060295417,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42675371031213,0,0.804231779293047,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.425325291727159,2.4180801129769,1.16253575405585,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0.670302275535787,0,0,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,1.36373060295417,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42675371031213,0,0.804231779293047,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.425325291727159,2.4180801129769,1.16253575405585,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0.670302275535787,0,0,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:69026957..69026966,+ | |short_description=p@chr2:69026957..69026966,+ | ||
}} | }} |
Latest revision as of 11:41, 29 July 2015
Short description: | p@chr2:69026957..69026966, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:69026957..69026966, + |
Coexpression cluster: | C1740_Keratinocyte_Mammary_Mallassezderived_Gingival_Small_Sebocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.46e-63 | 4 |
gingival epithelial cell | 1.23e-38 | 3 |
sebum secreting cell | 2.05e-15 | 2 |
epithelial cell of sweat gland | 2.05e-15 | 2 |
epithelial cell of skin gland | 2.05e-15 | 2 |
acinar cell of sebaceous gland | 2.05e-15 | 2 |
epidermal cell | 1.40e-13 | 9 |
general ecto-epithelial cell | 4.38e-09 | 14 |
keratinocyte | 5.38e-07 | 5 |
acinar cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.46e-63 | 4 |
mammary bud | 1.46e-63 | 4 |
mammary ridge | 1.46e-63 | 4 |
mammary placode | 1.46e-63 | 4 |
gingival epithelium | 1.23e-38 | 3 |
external ectoderm | 2.71e-32 | 8 |
skin gland | 2.05e-15 | 2 |
epidermis gland | 2.05e-15 | 2 |
gland of integumental system | 2.05e-15 | 2 |
sebaceous gland | 2.05e-15 | 2 |
skin sebaceous gland | 2.05e-15 | 2 |
sweat gland | 2.05e-15 | 2 |
sweat gland placode | 2.05e-15 | 2 |
sebaceous gland placode | 2.05e-15 | 2 |
epithelium of mucosa | 3.29e-15 | 8 |
gingiva | 3.29e-15 | 8 |
exocrine gland | 4.66e-15 | 31 |
ectodermal placode | 4.66e-15 | 31 |
exocrine system | 4.66e-15 | 31 |
ecto-epithelium | 2.04e-13 | 104 |
mouth mucosa | 9.51e-10 | 13 |
skin epidermis | 1.53e-08 | 15 |
outer epithelium | 1.53e-08 | 15 |
enveloping layer of ectoderm | 1.53e-08 | 15 |
ectoderm-derived structure | 3.72e-08 | 171 |
ectoderm | 3.72e-08 | 171 |
presumptive ectoderm | 3.72e-08 | 171 |
gland | 3.84e-08 | 59 |
epithelial bud | 1.43e-07 | 37 |
female organism | 6.81e-07 | 41 |