FFCP PHASE1:Hg19::chr5:179440262..179440275,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55819 | |EntrezGene=55819 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18280 | |HGNC=18280 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-70bp_to_ENST00000522885_5end | |association_with_transcript=-70bp_to_ENST00000522885_5end | ||
|cluster_id=chr5:179440262..179440275,- | |||
|coexpression_cluster_id=C469 | |coexpression_cluster_id=C469 | ||
|description=CAGE_peak_6_at_RNF130_5end | |description=CAGE_peak_6_at_RNF130_5end | ||
|id=chr5:179440262..179440275,- | |id=chr5:179440262..179440275,- | ||
|ontology_enrichment_celltype=CL:0002194!1.34e-20!63;CL:0000576!1.34e-20!63;CL:0000040!1.34e-20!63;CL:0000559!1.34e-20!63;CL:0000766!9.73e-20!76;CL:0002009!2.75e-19!65;CL:0000839!6.27e-18!70;CL:0000557!2.28e-17!71;CL:0000860!1.03e-15!45;CL:0002057!2.10e-15!42;CL:0000763!3.00e-14!112;CL:0000049!3.00e-14!112;CL:0002087!1.15e-08!119;CL:0000738!2.26e-08!140;CL:0000037!8.80e-08!172;CL:0000566!8.80e-08!172;CL:0002031!2.82e-07!124;CL:0002032!2.84e-07!165;CL:0000837!2.84e-07!165 | |ontology_enrichment_celltype=CL:0002194!1.34e-20!63;CL:0000576!1.34e-20!63;CL:0000040!1.34e-20!63;CL:0000559!1.34e-20!63;CL:0000766!9.73e-20!76;CL:0002009!2.75e-19!65;CL:0000839!6.27e-18!70;CL:0000557!2.28e-17!71;CL:0000860!1.03e-15!45;CL:0002057!2.10e-15!42;CL:0000763!3.00e-14!112;CL:0000049!3.00e-14!112;CL:0002087!1.15e-08!119;CL:0000738!2.26e-08!140;CL:0000037!8.80e-08!172;CL:0000566!8.80e-08!172;CL:0002031!2.82e-07!124;CL:0002032!2.84e-07!165;CL:0000837!2.84e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000473;7.10e-21;39!CL:0000234;7.10e-21;39!CL:0000235;9.87e-20;6!CL:0000576;4.09e-17;48!CL:0000766;1.01e-15;69!CL:0002619;1.63e-14;3!CL:0000860;7.52e-13;33!CL:0002057;7.52e-13;33!CL:0000763;3.82e-08;100!CL:0000775;1.17e-07;3!CL:0000738;2.44e-07;136!CL:0000875;6.31e-07;3!CL:0002396;6.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.89e-35,59;CL:0000576,4.89e-35,59;CL:0000040,4.89e-35,59;CL:0000559,4.89e-35,59;CL:0002009,9.88e-34,61;CL:0000766,9.95e-34,72;CL:0000839,8.26e-31,66;CL:0000557,2.82e-30,67;CL:0000473,6.92e-30,48;CL:0000234,6.92e-30,48;CL:0000763,1.57e-22,108;CL:0000049,1.57e-22,108;CL:0000235,1.31e-19,6;CL:0000860,5.42e-18,42;CL:0002057,5.42e-18,42;CL:0002087,3.61e-17,115;CL:0000738,9.11e-17,136;CL:0002619,1.01e-14,3;CL:0002031,1.14e-14,120;CL:0000037,1.16e-13,168;CL:0002032,3.28e-13,161;CL:0000837,3.28e-13,161;CL:0000988,1.16e-12,177;CL:0000775,1.18e-07,3;CL:0000875,7.58e-07,3;CL:0002396,7.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.19e-13;42!CL:0000049;7.84e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!5.33e-14!86;UBERON:0002371!8.12e-14!80;UBERON:0004765!5.01e-13!101;UBERON:0001434!5.01e-13!101;UBERON:0002390!4.53e-12!102;UBERON:0003061!4.53e-12!102;UBERON:0002405!2.07e-11!115;UBERON:0002193!3.24e-11!112 | |ontology_enrichment_uberon=UBERON:0001474!5.33e-14!86;UBERON:0002371!8.12e-14!80;UBERON:0004765!5.01e-13!101;UBERON:0001434!5.01e-13!101;UBERON:0002390!4.53e-12!102;UBERON:0003061!4.53e-12!102;UBERON:0002405!2.07e-11!115;UBERON:0002193!3.24e-11!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.18e-26,76;UBERON:0002390,1.85e-25,98;UBERON:0003061,1.85e-25,98;UBERON:0001474,7.92e-24,82;UBERON:0002193,1.43e-22,108;UBERON:0004765,2.92e-21,90;UBERON:0002405,2.07e-20,93;UBERON:0001434,1.26e-18,100;UBERON:0003081,2.57e-09,203;UBERON:0002204,3.99e-09,167 | |||
|phase1_expression=0.181678379270557,1.2846031433459,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,1.20326668482085,0.868043482863407,2.01523926815932,1.94336199611388,1.28787783817093,1.16318591023652,0.377875943688809,0.727752183563449,0.464858073811369,1.6446715520873,0.309706370895104,0.575384784644301,0.256160706529101,0.945928919554341,1.72372840368309,0,0,2.07066573496865,1.36453075028923,1.12361742222542,1.22433556948361,0,0,0.659702600373432,0.398927315243264,0,1.45104619314292,0,0.622822248995575,1.00499466102697,3.12889751052121,0.65156653411535,0.605399502633369,0.368277635987565,0.949387162322653,0.422510572623884,0.637812899895131,0.209658645508376,1.46027220490444,0.300353785683013,0.32145117339416,1.42506371870624,0.19891667719909,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.283604451492204,0,0.175669571386252,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,1.86141144726411,0.953962497221368,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0,0.336672227908132,0.125118519871964,0,0,0.612975591598039,0.45071417671979,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0.276149695926898,0,0.355009592516614,0,0,0.193260853163297,0,0,0.243947412259191,0.795178609928912,0.464775771478074,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0.343135620597051,0,0,0.301586917234893,0,0,0,0,0.115930404975077,0,0.288732895522148,0,0.380508304469197,0.790204397959275,0,1.23108503043699,0.702012795417713,2.37809859661965,0,0,0,0,0,0,0,0.352193736052904,0,0,0.12624243342638,0,0,0,0,0.514137463516618,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,1.2162378064119,2.51128545716063,12.6500363689819,0,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,1.91381625495949,5.24304916763028,8.97484377612075,0.414415513436035,0,0,0,0.415941723061614,0.713715955188647,0.473107245101804,0,0,0,0,0,0,0,0,0,0,1.50999940573032,0.320182673410333,0,0,0,0,0,0.561320188866147,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.412164046590889,0.183138929636687,0,0,0,0,0.096670718292122,0,0,0,0,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.855877976067841,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0,0,0.349934720244983,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,2.84823593587081,0,0,0,0,0.79312517629427,0,0,0.245040215981032,0,0.28853842595289,0.284567373393656,0.318852545457645,0.59873811429845,0.383010740264733,0.211673582723883,0.973865820823666,0.280797178113459,0.228234679033192,0,0,0,0.321176150207399,1.00899853595524,0,0,0,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0,0.296964680832639,0,0,0.844016498463076,0,0,0,0.19924798825107,0,0.251932747854276,0.102268682502155,0,0,0,0,0.511572370226872,0.0986434056369336,2.3948309234694,0,0,0.278304294485554,0,0.520855522170466,0,0,0,0,0,0,0,0.173624994933292,0,0.482385754501632,0,0.442317039724898,0.886642856860642,0.219385397153973,0,0,0.0769502585037971,0.227884111694002,0,0,0.108647371922008,0,0,0,0,0.470940769185074,0.498635045700469,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.471807930864739,0,0.468528891450678,0,0,0,0,0,0.61214552326098,0.189559738885464,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0.347119476670262,0,0,0.17472666824203,0.343972064943233,0.290268993867255,0.146178634172371,0.0821154570532092,0.193978032976839,0.176512253383001,0.677942222341597,0.137041924646751,0,0.0633107959558787,0.195551382734803,0,0,0.39961921916426,0,0,0,0,0,0,0,0.104602846312333,0.203996435272644,0.288950589901519,0,0.684526894459965,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0.315132729228895,0.247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| ||
|short_description=p6@RNF130 | |short_description=p6@RNF130 | ||
}} | }} |
Latest revision as of 10:08, 17 September 2015
Short description: | p6@RNF130 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RNF130_5end |
Coexpression cluster: | C469_Neutrophils_Monocytederived_CD14_CD19_Eosinophils_blood_Macrophage |
Association with transcript: | -70bp_to_ENST00000522885_5end |
EntrezGene: | RNF130 |
HGNC: | 18280 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.89e-35 | 59 |
monocyte | 4.89e-35 | 59 |
monoblast | 4.89e-35 | 59 |
promonocyte | 4.89e-35 | 59 |
macrophage dendritic cell progenitor | 9.88e-34 | 61 |
myeloid leukocyte | 9.95e-34 | 72 |
myeloid lineage restricted progenitor cell | 8.26e-31 | 66 |
granulocyte monocyte progenitor cell | 2.82e-30 | 67 |
defensive cell | 6.92e-30 | 48 |
phagocyte | 6.92e-30 | 48 |
myeloid cell | 1.57e-22 | 108 |
common myeloid progenitor | 1.57e-22 | 108 |
macrophage | 1.31e-19 | 6 |
classical monocyte | 5.42e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.42e-18 | 42 |
nongranular leukocyte | 3.61e-17 | 115 |
leukocyte | 9.11e-17 | 136 |
adult endothelial progenitor cell | 1.01e-14 | 3 |
hematopoietic lineage restricted progenitor cell | 1.14e-14 | 120 |
hematopoietic stem cell | 1.16e-13 | 168 |
hematopoietic oligopotent progenitor cell | 3.28e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.28e-13 | 161 |
hematopoietic cell | 1.16e-12 | 177 |
neutrophil | 1.18e-07 | 3 |
non-classical monocyte | 7.58e-07 | 3 |
CD14-low, CD16-positive monocyte | 7.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.18e-26 | 76 |
hematopoietic system | 1.85e-25 | 98 |
blood island | 1.85e-25 | 98 |
bone element | 7.92e-24 | 82 |
hemolymphoid system | 1.43e-22 | 108 |
skeletal element | 2.92e-21 | 90 |
immune system | 2.07e-20 | 93 |
skeletal system | 1.26e-18 | 100 |
lateral plate mesoderm | 2.57e-09 | 203 |
musculoskeletal system | 3.99e-09 | 167 |