FFCP PHASE1:Hg19::chr19:54704990..54705024,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:54704990..54705024,+
|short_description=p2@RPS9
|description=CAGE_peak_2_at_RPS9_5end
|association_with_transcript=0bp_to_ENST00000391753,uc002qea.2_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6203 | |EntrezGene=6203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10442 | |HGNC=10442 | ||
|TSSclassifier=strong | |||
|UniProt=P46781 | |UniProt=P46781 | ||
|association_with_transcript=0bp_to_ENST00000391753,uc002qea.2_5end | |||
|cluster_id=chr19:54704990..54705024,+ | |||
|description=CAGE_peak_2_at_RPS9_5end | |||
|id=chr19:54704990..54705024,+ | |||
|ontology_enrichment_celltype=CL:0000012!9.84e-24!682;CL:0002057!2.63e-23!42;CL:0000548!2.36e-22!679;CL:0000004!2.36e-22!679;CL:0000255!2.36e-22!679;CL:0000144!3.84e-21!625;CL:0000860!4.19e-21!45;CL:0000003!5.03e-19!722;CL:0002371!3.96e-18!591;CL:0000034!1.60e-17!444;CL:0000766!2.86e-17!76;CL:0000763!3.17e-17!112;CL:0000049!3.17e-17!112;CL:0000048!9.07e-17!430;CL:0000723!4.38e-16!436;CL:0002194!5.16e-14!63;CL:0000576!5.16e-14!63;CL:0000040!5.16e-14!63;CL:0000559!5.16e-14!63;CL:0002009!6.56e-14!65;CL:0000557!1.60e-13!71;CL:0000839!2.32e-13!70;CL:0000183!6.45e-12!59;CL:0000680!3.31e-11!57;CL:0000056!3.31e-11!57;CL:0000355!3.31e-11!57;CL:0000187!5.43e-11!54;CL:0000393!1.44e-10!60;CL:0000211!1.44e-10!60;CL:0002320!2.14e-10!365;CL:0000988!1.06e-09!182;CL:0000037!7.01e-09!172;CL:0000566!7.01e-09!172;CL:0000134!8.73e-09!358;CL:0000192!9.28e-09!42;CL:0000514!9.28e-09!42;CL:0000063!1.62e-08!578;CL:0000222!5.96e-08!119;CL:0002032!7.13e-08!165;CL:0000837!7.13e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.06e-19;33!CL:0002057;2.06e-19;33!CL:0000576;5.06e-14;48!CL:0000473;2.24e-13;39!CL:0000234;2.24e-13;39!CL:0000766;8.60e-10;69!CL:0000763;2.74e-08;100!CL:0000187;4.30e-07;55!CL:0000192;9.36e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.45e-23,42;CL:0002057,2.45e-23,42;CL:0000473,1.28e-19,48;CL:0000234,1.28e-19,48;CL:0000766,7.75e-19,72;CL:0000763,2.04e-18,108;CL:0000049,2.04e-18,108;CL:0000034,3.82e-18,441;CL:0000048,2.04e-17,427;CL:0000723,1.11e-16,433;CL:0002194,1.38e-15,59;CL:0000576,1.38e-15,59;CL:0000040,1.38e-15,59;CL:0000559,1.38e-15,59;CL:0002009,1.96e-15,61;CL:0000557,7.07e-15,67;CL:0000839,1.02e-14,66;CL:0000680,1.78e-11,58;CL:0000056,1.78e-11,58;CL:0000355,1.78e-11,58;CL:0000187,2.92e-11,55;CL:0000393,8.26e-11,61;CL:0000211,8.26e-11,61;CL:0002320,1.12e-10,361;CL:0000988,3.07e-10,177;CL:0000037,2.03e-09,168;CL:0000134,4.84e-09,354;CL:0000192,5.09e-09,43;CL:0000514,5.09e-09,43;CL:0002032,2.23e-08,161;CL:0000837,2.23e-08,161;CL:0000222,3.27e-08,121 | |||
|ontology_enrichment_development_v019=CL:0002057;2.86e-17;42!CL:0000514;9.36e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.75e-21!167;UBERON:0000926!3.32e-17!448;UBERON:0004120!3.32e-17!448;UBERON:0006603!3.32e-17!448;UBERON:0003081!3.84e-16!216;UBERON:0002390!5.29e-15!102;UBERON:0003061!5.29e-15!102;UBERON:0002371!2.27e-14!80;UBERON:0001474!6.68e-14!86;UBERON:0002193!1.09e-12!112;UBERON:0004765!4.04e-12!101;UBERON:0001434!4.04e-12!101;UBERON:0004290!3.94e-11!70;UBERON:0000914!1.07e-09!83;UBERON:0002329!1.07e-09!83;UBERON:0003077!1.07e-09!83;UBERON:0003059!1.07e-09!83;UBERON:0007282!1.07e-09!83;UBERON:0009618!1.07e-09!83;UBERON:0007285!1.07e-09!83;UBERON:0001134!1.24e-09!61;UBERON:0002036!1.24e-09!61;UBERON:0003082!1.24e-09!61;UBERON:0002384!1.36e-09!375;UBERON:0002385!1.60e-08!63;UBERON:0001015!1.60e-08!63;UBERON:0000383!1.60e-08!63;UBERON:0000486!1.75e-08!82;UBERON:0002405!1.63e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.14e-23,167;UBERON:0000926,1.67e-19,315;UBERON:0004120,1.67e-19,315;UBERON:0006603,1.67e-19,315;UBERON:0004765,5.19e-17,90;UBERON:0003081,3.39e-16,203;UBERON:0002390,4.12e-16,98;UBERON:0003061,4.12e-16,98;UBERON:0002371,1.16e-15,76;UBERON:0001474,4.32e-15,82;UBERON:0001434,3.09e-14,100;UBERON:0002193,1.24e-13,108;UBERON:0007503,3.51e-13,78;UBERON:0002329,2.15e-11,71;UBERON:0003059,2.15e-11,71;UBERON:0007282,2.15e-11,71;UBERON:0004290,2.15e-11,71;UBERON:0009618,2.15e-11,71;UBERON:0003077,4.22e-11,72;UBERON:0007285,4.22e-11,72;UBERON:0007524,7.92e-11,73;UBERON:0002405,1.53e-10,93;UBERON:0001134,6.88e-10,62;UBERON:0002036,6.88e-10,62;UBERON:0003082,6.88e-10,62;UBERON:0002384,7.40e-10,371;UBERON:0002385,1.03e-08,64;UBERON:0001015,1.03e-08,64;UBERON:0000383,1.03e-08,64;UBERON:0000486,1.06e-08,83 | |||
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| ||
|short_description=p2@RPS9 | |||
}} | }} |
Latest revision as of 21:32, 19 September 2015
Short description: | p2@RPS9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPS9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000391753, uc002qea.2_5end |
EntrezGene: | RPS9 |
HGNC: | 10442 |
UniProt: | P46781 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.14e-23 | 167 |
mesoderm | 1.67e-19 | 315 |
mesoderm-derived structure | 1.67e-19 | 315 |
presumptive mesoderm | 1.67e-19 | 315 |
skeletal element | 5.19e-17 | 90 |
lateral plate mesoderm | 3.39e-16 | 203 |
hematopoietic system | 4.12e-16 | 98 |
blood island | 4.12e-16 | 98 |
bone marrow | 1.16e-15 | 76 |
bone element | 4.32e-15 | 82 |
skeletal system | 3.09e-14 | 100 |
hemolymphoid system | 1.24e-13 | 108 |
epithelial vesicle | 3.51e-13 | 78 |
somite | 2.15e-11 | 71 |
presomitic mesoderm | 2.15e-11 | 71 |
presumptive segmental plate | 2.15e-11 | 71 |
dermomyotome | 2.15e-11 | 71 |
trunk paraxial mesoderm | 2.15e-11 | 71 |
paraxial mesoderm | 4.22e-11 | 72 |
presumptive paraxial mesoderm | 4.22e-11 | 72 |
dense mesenchyme tissue | 7.92e-11 | 73 |
immune system | 1.53e-10 | 93 |
skeletal muscle tissue | 6.88e-10 | 62 |
striated muscle tissue | 6.88e-10 | 62 |
myotome | 6.88e-10 | 62 |
connective tissue | 7.40e-10 | 371 |
muscle tissue | 1.03e-08 | 64 |
musculature | 1.03e-08 | 64 |
musculature of body | 1.03e-08 | 64 |
multilaminar epithelium | 1.06e-08 | 83 |