FFCP PHASE1:Hg19::chr12:1920892..1920943,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93589 | |EntrezGene=93589 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20202 | |HGNC=20202 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000537923,ENST00000540728,ENST00000541331,ENST00000545595_5end | |association_with_transcript=0bp_to_ENST00000537923,ENST00000540728,ENST00000541331,ENST00000545595_5end | ||
|cluster_id=chr12:1920892..1920943,- | |||
|description=CAGE_peak_1_at_CACNA2D4_5end | |description=CAGE_peak_1_at_CACNA2D4_5end | ||
|id=chr12:1920892..1920943,- | |id=chr12:1920892..1920943,- | ||
|ontology_enrichment_celltype=CL:0000860;3.44e-32;33!CL:0002057;3.44e-32;33!CL:0000473;8.98e-31;39!CL:0000234;8.98e-31;39!CL:0000576;1.37e-28;48!CL:0000766;1.01e-25;69!CL:0000763;4.54e-19;100!CL:0000791;2.96e-13;18!CL:0000789;2.96e-13;18!CL:0002419;2.96e-13;18!CL:0002087;6.58e-13;104!CL:0000084;1.37e-11;25!CL:0000738;4.93e-11;136!CL:0000988;4.63e-10;177!CL:0000625;8.79e-09;11 | |ontology_enrichment_celltype=CL:0000037!6.93e-37!172;CL:0000566!6.93e-37!172;CL:0000766!2.42e-36!76;CL:0000763!8.50e-36!112;CL:0000049!8.50e-36!112;CL:0000988!4.17e-35!182;CL:0002032!5.74e-34!165;CL:0000837!5.74e-34!165;CL:0000557!4.85e-33!71;CL:0000738!6.26e-32!140;CL:0000839!6.61e-32!70;CL:0002194!4.05e-31!63;CL:0000576!4.05e-31!63;CL:0000040!4.05e-31!63;CL:0000559!4.05e-31!63;CL:0002057!3.59e-30!42;CL:0002009!5.98e-30!65;CL:0002087!9.84e-28!119;CL:0002031!1.84e-27!124;CL:0000860!1.71e-26!45;CL:0000134!5.29e-13!358;CL:0002320!6.35e-13!365;CL:0000791!9.26e-10!18;CL:0000789!9.26e-10!18;CL:0002420!9.26e-10!18;CL:0002419!9.26e-10!18;CL:0000790!9.26e-10!18;CL:0000219!6.32e-09!390;CL:0000048!6.05e-08!430;CL:0000084!7.52e-08!25;CL:0000827!7.52e-08!25;CL:0000034!3.75e-07!444;CL:0000723!3.92e-07!436 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.44e-32;33!CL:0002057;3.44e-32;33!CL:0000473;8.98e-31;39!CL:0000234;8.98e-31;39!CL:0000576;1.37e-28;48!CL:0000766;1.01e-25;69!CL:0000763;4.54e-19;100!CL:0000791;2.96e-13;18!CL:0000789;2.96e-13;18!CL:0002419;2.96e-13;18!CL:0002087;6.58e-13;104!CL:0000084;1.37e-11;25!CL:0000738;4.93e-11;136!CL:0000988;4.63e-10;177!CL:0000625;8.79e-09;11 | ||
|ontology_enrichment_disease=DOID:8692;2.93e-09;31 | |ontology_enrichment_celltype_v019_2=CL:0000037,2.22e-59,168;CL:0000766,2.98e-57,72;CL:0000763,6.58e-57,108;CL:0000049,6.58e-57,108;CL:0000988,2.16e-56,177;CL:0002032,1.09e-55,161;CL:0000837,1.09e-55,161;CL:0000557,1.31e-51,67;CL:0000839,4.45e-51,66;CL:0000738,1.69e-50,136;CL:0002194,1.59e-49,59;CL:0000576,1.59e-49,59;CL:0000040,1.59e-49,59;CL:0000559,1.59e-49,59;CL:0000473,3.46e-47,48;CL:0000234,3.46e-47,48;CL:0002009,3.79e-47,61;CL:0002087,3.32e-45,115;CL:0002031,1.27e-44,120;CL:0000860,1.43e-42,42;CL:0002057,1.43e-42,42;CL:0000134,7.44e-21,354;CL:0002320,3.98e-20,361;CL:0000219,6.67e-17,386;CL:0000791,2.74e-13,18;CL:0000789,2.74e-13,18;CL:0002420,2.74e-13,18;CL:0002419,2.74e-13,18;CL:0000790,2.74e-13,18;CL:0000084,1.16e-11,25;CL:0000827,1.16e-11,25;CL:0000048,2.99e-11,427;CL:0000034,8.14e-11,441;CL:0000723,1.40e-10,433;CL:0000625,8.42e-09,11;CL:0002393,1.38e-08,9;CL:0002397,1.38e-08,9 | ||
|ontology_enrichment_uberon=UBERON:0000178;1.60e-07;15!UBERON:0000179;1.60e-07;15!UBERON:0000463;1.60e-07;15 | |ontology_enrichment_development_v019=CL:0002057;1.21e-30;42!CL:0000049;3.06e-16;108!CL:0000790;2.96e-13;18 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;2.93e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.72e-09,31;DOID:1240,1.31e-08,39;DOID:2531,5.21e-07,51;DOID:0060083,5.21e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.36e-35!102;UBERON:0003061!6.36e-35!102;UBERON:0002193!1.39e-34!112;UBERON:0002405!2.33e-29!115;UBERON:0002371!3.24e-29!80;UBERON:0001474!1.12e-25!86;UBERON:0004765!1.16e-18!101;UBERON:0001434!1.16e-18!101;UBERON:0003081!1.29e-12!216;UBERON:0002384!1.39e-12!375;UBERON:0002204!1.91e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.60e-07;15!UBERON:0000179;1.60e-07;15!UBERON:0000463;1.60e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.73e-53,98;UBERON:0003061,1.73e-53,98;UBERON:0002193,7.31e-51,108;UBERON:0002371,2.88e-45,76;UBERON:0002405,9.97e-44,93;UBERON:0001474,4.17e-40,82;UBERON:0004765,2.46e-34,90;UBERON:0001434,1.75e-28,100;UBERON:0002384,5.48e-20,371;UBERON:0003081,1.04e-16,203;UBERON:0002204,1.64e-09,167;UBERON:0000178,1.77e-07,15;UBERON:0000179,1.77e-07,15;UBERON:0000463,1.77e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0.458480434487708,0.164201178899891,0.314843125254717,15.3412067971073,11.5148819429164,12.0756576186539,0,0,0,0,0,2.93600439334847,17.1738576644882,25.8702337236483,15.1907609501096,4.03047853631864,2.59114932815184,1.80302897343931,23.1183199659508,21.1610528465733,21.8325655069035,37.4210749418152,40.2944530261389,43.9783046671047,30.4953935861479,29.7146419573757,24.8306341383014,95.83929924478,95.5317331704063,108.341189275473,30.3070166663594,27.5635211558424,25.1690302578495,75.296637523242,75.7392503899581,77.999129347483,18.4716728104561,18.1511928435685,11.5080682643827,54.2691276235452,65.8166860641722,50.4486021686416,28.6423478392687,19.2948679815475,28.8861163457805,33.9023721474687,68.499640293687,52.8492187026277,10.5627643155971,10.2050063983221,10.6925909209272,26.7342142128658,27.4823713899957,14.9474795628285,6.84030584978997,5.76858363877361,5.47992461293902,0,1.09227722252426,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,1.32171328579026,3.92355994087075,1.84368859342554,2.75393678159366,9.82526906872912,6.16804496998528,3.17654341242288,3.58514493296949,2.36723902867367,0,14.149128024417,3.82987679717288,5.75988125917415,3.5204502289452,9.60684897942564,10.7949258474699,3.61763390128087,3.03985019564433,4.92665245749589,2.37258501059297,1.07016331235885,7.31748666634838,6.68525121915641,9.58051234004803,9.27794102803101,4.55435445635105,5.73417745783374,5.20866763085135,6.65316431113862,6.17357988218868,6.2713439465665,8.74515085866421,6.39298580518846,5.74789597844733,6.45141578319144,8.55808626507223,3.91025890483557,0,0.670700859703636,0,0,0,0,0,0.486634870302636,0,0,0.263504357079378,0.916853528483988,0,0,0.324547393654683,1.0447784237956,3.19099105245276,2.38490624305342,1.14398982156026,0.371457501329565,0,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0,0,0,0,0.402829317109147,0,0.732186172644509,1.47065232138347,0,0.535798369704479,0.22452937262617,0.337834441449967,0,0,0.183201743930407,1.31780417436063,7.75560528296651,0,0.496971951695318,0,0.132409180813219,0,0.354668382198357,0,0,0,1.24484414159907,1.75123873690594,0.490385709340376,0,1.72852777344,0.937285727335186,0.936480230490962,0.570471821544449,0.298897361103602,0.352303495931295,0,0,0,0.368502951935304,0.103325781175765,0,0,2.73048408581408,2.87447256726495,0.505008341862199,0,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,11.2193419042757,1.6462960453256,1.47008711385542,0,0,0.590789906681404,4.41463099414651,0.860919069801795,0,0,0,0,0,0,0,0,0,0.117408694235822,0.577465791044295,0.462985512576611,0.570762456703795,0,0,15.7578883895934,7.48813648445561,20.6597315581332,0,0,0,0,0,0,15.7652236126702,14.6160400461955,2.28060927094849,7.35011762426503,8.45824303956746,0,0,0,0,0,0,0,1.00917975910825,0,0.4400297149257,0.129271715757778,17.8828222925941,2.535908257668,0,0,0.514414748524284,0,1.0656887160644,0.428933980974443,0.542621605391443,0,1.30294473717494,0,0,0.301439377059586,0,0,4.86495122564762,8.53837055434615,4.21667878966063,0,0,0,0,0.205476322550383,0,9.07889666347571,5.12279976525011,13.5845372161496,4.49200626979119,0,3.90419561572865,0,0.335032530668698,0,2.24702107184155,0,3.72973962092432,0,0.500170521059677,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,1.37060810223918,0.343143423810856,8.68425709716127,13.8057088523915,9.49875264450655,0,0,0,0,0,0,0,0,0,0,0,0.532685175939381,0,0.519254429183621,0.813472649219715,0,0,0,0.114814448164607,0,0,1.35359883872224,0.231046011313244,1.56869953835371,0,0.105551628892876,0,0.170093705276516,1.29549549661284,1.54227252690289,0.541892875087706,2.50844886927427,0.254876273045038,0,0.895499018888713,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0.096670718292122,0.924291702687866,1.22802939780904,0.137836572484531,0.214840489736547,0.290033387828457,0.426133137080504,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0.744316738719335,0.316379424718726,0.762520775695299,0.511795582622668,0.42793898803392,0,0,0,0.274537029736055,0.353437207037059,0.202182481573316,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0.294747123039363,0,0,0,0,0.379473173765715,0,0,0,0,0.847294206991012,0,0,0,0,5.07447609232169,6.117097657139,5.69647187174163,6.4322579373603,11.1067813733272,8.43015304550532,7.56044012133361,14.2762531732969,0,0,0,0,0,0,2.71024663638998,8.3823336001783,0,0.211673582723883,0,14.0398589056729,11.868203309726,18.1748679096707,0,20.8228886695972,61.1840566145095,55.091320063156,53.6566259489811,4.12206413706918,2.76516687877612,6.71028323677248,5.8397199599168,13.0910023919367,72.6640113866583,0,0.270455678475983,4.32993558397166,0,0,2.05111450980652,0,1.5602073798847,0,0,0,0,0,0.984685914873589,2.78271762557265,82.0723293649263,0,1.79323189425963,2.21027132424918,0,0,0,0,3.95420745048238,0.179021174675609,1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| ||
|short_description=p1@CACNA2D4 | |short_description=p1@CACNA2D4 | ||
}} | }} |
Latest revision as of 17:37, 17 September 2015
Short description: | p1@CACNA2D4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CACNA2D4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000537923, ENST00000540728, ENST00000541331, ENST00000545595_5end |
EntrezGene: | CACNA2D4 |
HGNC: | 20202 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.73e-53 | 98 |
blood island | 1.73e-53 | 98 |
hemolymphoid system | 7.31e-51 | 108 |
bone marrow | 2.88e-45 | 76 |
immune system | 9.97e-44 | 93 |
bone element | 4.17e-40 | 82 |
skeletal element | 2.46e-34 | 90 |
skeletal system | 1.75e-28 | 100 |
connective tissue | 5.48e-20 | 371 |
lateral plate mesoderm | 1.04e-16 | 203 |
musculoskeletal system | 1.64e-09 | 167 |
blood | 1.77e-07 | 15 |
haemolymphatic fluid | 1.77e-07 | 15 |
organism substance | 1.77e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.72e-09 | 31 |
leukemia | 1.31e-08 | 39 |
hematologic cancer | 5.21e-07 | 51 |
immune system cancer | 5.21e-07 | 51 |