FFCP PHASE1:Hg19::chr6:11779174..11779185,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84830 | |EntrezGene=84830 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21214 | |HGNC=21214 | ||
|TSSclassifier=strong | |||
|UniProt=Q5THW1,Q96IZ2 | |UniProt=Q5THW1,Q96IZ2 | ||
|association_with_transcript=94bp_to_ENST00000379413,NM_001143948,NM_032744,uc003nab.2,uc011dip.1_5end | |association_with_transcript=94bp_to_ENST00000379413,NM_001143948,NM_032744,uc003nab.2,uc011dip.1_5end | ||
|cluster_id=chr6:11779174..11779185,- | |||
|coexpression_cluster_id=C1968 | |coexpression_cluster_id=C1968 | ||
|description=CAGE_peak_9_at_C6orf105_5end | |description=CAGE_peak_9_at_C6orf105_5end | ||
|id=chr6:11779174..11779185,- | |id=chr6:11779174..11779185,- | ||
|ontology_enrichment_celltype=CL:0000453;2.57e-23;5!CL:0002619;3.48e-17;3!CL:0002586;3.48e-17;3!CL:0000990;3.04e-13;8!CL:0000149;3.87e-13;4!CL:0000451;6.10e-11;10 | |ontology_enrichment_celltype=CL:0000990!1.05e-15!8;CL:0002586!4.11e-13!3;CL:0002619!5.23e-13!3;CL:0000451!9.98e-13!10;CL:0000149!6.11e-10!4;CL:0000453!2.68e-08!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000453;2.57e-23;5!CL:0002619;3.48e-17;3!CL:0002586;3.48e-17;3!CL:0000990;3.04e-13;8!CL:0000149;3.87e-13;4!CL:0000451;6.10e-11;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.57e-23,5;CL:0002586,2.71e-17,3;CL:0002619,3.78e-17,3;CL:0000990,3.04e-13,8;CL:0000149,3.21e-13,4;CL:0000451,6.10e-11,10 | |||
|ontology_enrichment_development_v019=UBERON:0001045;5.49e-14;1!UBERON:0005754;8.57e-14;1!UBERON:0007297;1.54e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000966;1.24e-22;5!UBERON:0005388;1.24e-22;5!UBERON:0001802;1.24e-22;5!UBERON:0006947;1.51e-17;3!UBERON:0004054;1.51e-17;3!UBERON:0000160;1.77e-17;17!UBERON:0001781;3.48e-17;3!UBERON:0001782;3.48e-17;3!UBERON:0001154;5.49e-14;1!UBERON:0001153;5.49e-14;1!UBERON:0009854;5.49e-14;1!UBERON:0001000;8.57e-14;1!UBERON:0000998;8.57e-14;1!UBERON:0006868;8.57e-14;1!UBERON:0005352;8.57e-14;1!UBERON:0005409;1.12e-13;22!UBERON:0005904;2.08e-13;4!UBERON:0001155;2.57e-13;9!UBERON:0000059;5.33e-11;11!UBERON:0002108;5.85e-11;4!UBERON:0004921;4.09e-08;33 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!1.37e-13!5;UBERON:0005388!1.37e-13!5;UBERON:0001802!1.37e-13!5;UBERON:0001781!4.11e-13!3;UBERON:0001782!4.11e-13!3;UBERON:0005424!4.11e-13!3;UBERON:0006947!6.65e-13!3;UBERON:0004054!6.65e-13!3;UBERON:0000160!2.46e-10!27;UBERON:0005904!8.73e-10!4;UBERON:0007023!8.51e-08!115;UBERON:0001155!1.09e-07!9;UBERON:0005409!1.15e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.24e-22;5!UBERON:0005388;1.24e-22;5!UBERON:0001802;1.24e-22;5!UBERON:0006947;1.51e-17;3!UBERON:0004054;1.51e-17;3!UBERON:0000160;1.77e-17;17!UBERON:0001781;3.48e-17;3!UBERON:0001782;3.48e-17;3!UBERON:0001154;5.49e-14;1!UBERON:0001153;5.49e-14;1!UBERON:0009854;5.49e-14;1!UBERON:0001000;8.57e-14;1!UBERON:0000998;8.57e-14;1!UBERON:0006868;8.57e-14;1!UBERON:0005352;8.57e-14;1!UBERON:0005409;1.12e-13;22!UBERON:0005904;2.08e-13;4!UBERON:0001155;2.57e-13;9!UBERON:0000059;5.33e-11;11!UBERON:0002108;5.85e-11;4!UBERON:0004921;4.09e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,4.95e-19,6;UBERON:0005388,4.95e-19,6;UBERON:0001802,4.95e-19,6;UBERON:0006947,1.18e-17,3;UBERON:0004054,1.18e-17,3;UBERON:0000160,1.90e-17,17;UBERON:0001782,2.71e-17,3;UBERON:0005424,2.71e-17,3;UBERON:0001154,5.85e-14,1;UBERON:0001153,5.85e-14,1;UBERON:0001045,5.85e-14,1;UBERON:0000998,6.65e-14,1;UBERON:0006868,6.65e-14,1;UBERON:0001000,7.55e-14,1;UBERON:0005352,7.55e-14,1;UBERON:0005904,1.72e-13,4;UBERON:0001155,2.57e-13,9;UBERON:0001781,3.21e-13,4;UBERON:0005409,4.49e-12,25;UBERON:0000059,5.33e-11,11;UBERON:0002108,6.47e-11,4 | |||
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| ||
|short_description=p9@C6orf105 | |short_description=p9@C6orf105 | ||
}} | }} |
Latest revision as of 02:04, 20 September 2015
Short description: | p9@C6orf105 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_C6orf105_5end |
Coexpression cluster: | C1968_migratory_CD14_small_seminal_ductus_retina_Retinal |
Association with transcript: | 94bp_to_ENST00000379413, NM_001143948, NM_032744, uc003nab.2, uc011dip.1_5end |
EntrezGene: | C6orf105 |
HGNC: | 21214 |
UniProt: | Q5THW1Q96IZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.57e-23 | 5 |
retinal pigment epithelial cell | 2.71e-17 | 3 |
adult endothelial progenitor cell | 3.78e-17 | 3 |
conventional dendritic cell | 3.04e-13 | 8 |
visual pigment cell | 3.21e-13 | 4 |
dendritic cell | 6.10e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
retina | 4.95e-19 | 6 |
photoreceptor array | 4.95e-19 | 6 |
posterior segment of eyeball | 4.95e-19 | 6 |
male genital duct | 1.18e-17 | 3 |
internal male genitalia | 1.18e-17 | 3 |
intestine | 1.90e-17 | 17 |
pigmented layer of retina | 2.71e-17 | 3 |
presumptive retinal pigmented epithelium | 2.71e-17 | 3 |
vermiform appendix | 5.85e-14 | 1 |
caecum | 5.85e-14 | 1 |
midgut | 5.85e-14 | 1 |
seminal vesicle | 6.65e-14 | 1 |
seminal fluid secreting gland | 6.65e-14 | 1 |
vas deferens | 7.55e-14 | 1 |
spermatic cord | 7.55e-14 | 1 |
duct of male reproductive system | 1.72e-13 | 4 |
colon | 2.57e-13 | 9 |
layer of retina | 3.21e-13 | 4 |
gastrointestinal system | 4.49e-12 | 25 |
large intestine | 5.33e-11 | 11 |
small intestine | 6.47e-11 | 4 |