FFCP PHASE1:Hg19::chr10:42971050..42971098,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84856 | |EntrezGene=84856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000424751,uc001izz.1_5end | |association_with_transcript=0bp_to_ENST00000424751,uc001izz.1_5end | ||
|cluster_id=chr10:42971050..42971098,+ | |||
|description=CAGE_peak_1_at_LOC84856_5end | |description=CAGE_peak_1_at_LOC84856_5end | ||
|id=chr10:42971050..42971098,+ | |id=chr10:42971050..42971098,+ | ||
|ontology_enrichment_celltype=CL:0000077;1.81e-14;19 | |ontology_enrichment_celltype=CL:0000055!6.32e-14!180;CL:0000222!1.86e-12!119;CL:0000077!9.13e-12!19;CL:0000213!2.18e-10!57;CL:0000215!2.18e-10!57;CL:0000220!3.87e-09!246;CL:0002321!1.01e-08!248;CL:0000057!5.22e-08!75 | ||
| | |ontology_enrichment_celltype_v019=CL:0000077;1.81e-14;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.23e-14,19;CL:0000213,2.26e-09,58;CL:0000215,2.26e-09,58;CL:0000222,3.48e-09,121;CL:0000076,8.23e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!1.00e-09!173;UBERON:0006601!1.00e-09!173;UBERON:0004121!1.83e-09!169;UBERON:0000073!3.01e-09!94;UBERON:0001016!3.01e-09!94;UBERON:0000475!3.36e-09!365;UBERON:0000033!2.39e-08!123;UBERON:0004111!3.87e-08!241;UBERON:0000483!4.12e-08!309;UBERON:0000477!4.93e-08!286;UBERON:0000955!8.22e-08!69;UBERON:0006238!8.22e-08!69;UBERON:0000119!1.38e-07!312;UBERON:0005743!1.39e-07!86;UBERON:0000025!1.89e-07!194;UBERON:0000153!2.36e-07!129;UBERON:0007811!2.36e-07!129;UBERON:0002346!2.69e-07!90;UBERON:0001017!2.92e-07!82;UBERON:0003075!4.49e-07!86;UBERON:0007284!4.49e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.56e-09,132;UBERON:0004121,1.12e-07,171;UBERON:0000924,1.12e-07,171;UBERON:0006601,1.12e-07,171;UBERON:0001016,1.57e-07,89 | |||
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| ||
|short_description=p1@LOC84856 | |short_description=p1@LOC84856 | ||
}} | }} |
Latest revision as of 05:25, 18 September 2015
Short description: | p1@LOC84856 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC84856_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000424751, uc001izz.1_5end |
EntrezGene: | LOC84856 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.23e-14 | 19 |
lining cell | 2.26e-09 | 58 |
barrier cell | 2.26e-09 | 58 |
mesodermal cell | 3.48e-09 | 121 |
squamous epithelial cell | 8.23e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.56e-09 | 132 |
ectoderm-derived structure | 1.12e-07 | 171 |
ectoderm | 1.12e-07 | 171 |
presumptive ectoderm | 1.12e-07 | 171 |
nervous system | 1.57e-07 | 89 |